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IVF0014065 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014065
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr03:12334053..12334217
RNA-Seq ExpressionIVF0014065
SyntenyIVF0014065
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058105.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.79e-1585.37Show/hide
Query:  MVEGENGNDRSGGGGRKRRRWWKAKMAEVDRLVEGENGNDG
        M+EGENGNDRSGGGGR RRRWWKA  AE+DRLVEGEN NDG
Subjt:  MVEGENGNDRSGGGGRKRRRWWKAKMAEVDRLVEGENGNDG
KAA0063959.1 gag/pol protein [Cucumis melo var. makuwa]1.17e-0649.06Show/hide
Query:  NDRSGGGGRKRRRWWKAKMAEVDRLVEGENGNDGG---------WWRERTAEV
        +D SGG       WW+ KMA +DR+VEGENG+DGG         WWRE+TA +
Subjt:  NDRSGGGGRKRRRWWKAKMAEVDRLVEGENGNDGG---------WWRERTAEV
KAA0065564.1 hypothetical protein E6C27_scaffold90G00010 [Cucumis melo var. makuwa]9.29e-0447.37Show/hide
Query:  WWKAKMAEVDRLVEGENGNDGG---------WWRERTA
        WW+ K A +DR+VEGEN +DGG         WWRE+  
Subjt:  WWKAKMAEVDRLVEGENGNDGG---------WWRERTA
KAA0066345.1 hypothetical protein E6C27_scaffold21G004100 [Cucumis melo var. makuwa]2.98e-0550Show/hide
Query:  WWKAKMAEVDRLVEGENGNDGG---------WWRERTAEV
        WW+ K A +D+LVE ENGNDGG         WWRE+T  +
Subjt:  WWKAKMAEVDRLVEGENGNDGG---------WWRERTAEV
TrEMBL top hitse value%identityAlignment
A0A5A7UWW1 LINE-1 retrotransposable element ORF2 protein1.5e-1185.37Show/hide
Query:  MVEGENGNDRSGGGGRKRRRWWKAKMAEVDRLVEGENGNDG
        M+EGENGNDRSGGGGR RRRWWKA  AE+DRLVEGEN NDG
Subjt:  MVEGENGNDRSGGGGRKRRRWWKAKMAEVDRLVEGENGNDG
A0A5D3C1D1 Gag/pol protein3.1e-0450.94Show/hide
Query:  DRSGGGGRKRRR---WWKAKMAEVDRLVEGENGNDG---------GWWRERTA
        +R   GGRK      WW+ KMA +DR+VEGENG+DG         GWWRE+TA
Subjt:  DRSGGGGRKRRR---WWKAKMAEVDRLVEGENGNDG---------GWWRERTA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGGGAGAAAATGGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGGCGACGATGGTGGAAGGCGAAAATGGCTGAAGTCGATCGGTTGGTGGAGGGAGAAAA
CGGCAACGATGGTGGATGGTGGAGGGAGAGAACGGCTGAGGTCGGACGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGGGAGAAAATGGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGGCGACGATGGTGGAAGGCGAAAATGGCTGAAGTCGATCGGTTGGTGGAGGGAGAAAA
CGGCAACGATGGTGGATGGTGGAGGGAGAGAACGGCTGAGGTCGGACGGCTTTGA
Protein sequenceShow/hide protein sequence
MVEGENGNDRSGGGGRKRRRWWKAKMAEVDRLVEGENGNDGGWWRERTAEVGRL