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IVF0014072 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014072
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:22036756..22037005
RNA-Seq ExpressionIVF0014072
SyntenyIVF0014072
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058838.1 retrotransposon protein [Cucumis melo var. makuwa]8.91e-2054.32Show/hide
Query:  MVNEKVISIRLRECVFVAPPMV---------------NLSLGEHINGGLRYGFGPRLTHDGWLYMHIGANMEVVIVVGAKY
        M+N+KVI +RL+ECV V P  V               NLSLGE ++GGLRYGFGP LTH  WLY+HIGA+ME+V VV ++Y
Subjt:  MVNEKVISIRLRECVFVAPPMV---------------NLSLGEHINGGLRYGFGPRLTHDGWLYMHIGANMEVVIVVGAKY
TYK25868.1 hypothetical protein E5676_scaffold436G00840 [Cucumis melo var. makuwa]1.23e-1067.5Show/hide
Query:  NLSLGEHINGGLRYGFGPRLTHDGWLYMHIGANMEVVIVV
        NLSLGE ++GGLRYG GP L H  WLY+HIGA+M+VV +V
Subjt:  NLSLGEHINGGLRYGFGPRLTHDGWLYMHIGANMEVVIVV
XP_031740114.1 uncharacterized protein LOC105435219 [Cucumis sativus]2.38e-0972.73Show/hide
Query:  NLSLGEHINGGLRYGFGPRLTHDGWLYMHIGAN
        NLSL E ++GGLRYGF P LTH GWLY+HIGA+
Subjt:  NLSLGEHINGGLRYGFGPRLTHDGWLYMHIGAN
TrEMBL top hitse value%identityAlignment
A0A5A7UUF7 Retrotransposon protein4.1e-1453.66Show/hide
Query:  MVNEKVISIRLRECVFVAPPMV---------------NLSLGEHINGGLRYGFGPRLTHDGWLYMHIGANMEVVIVVGAKYV
        M+N+KVI +RL+ECV V P  V               NLSLGE ++GGLRYGFGP LTH  WLY+HIGA+ME+V VV ++Y+
Subjt:  MVNEKVISIRLRECVFVAPPMV---------------NLSLGEHINGGLRYGFGPRLTHDGWLYMHIGANMEVVIVVGAKYV
A0A5D3DQP8 Uncharacterized protein2.9e-0767.5Show/hide
Query:  NLSLGEHINGGLRYGFGPRLTHDGWLYMHIGANMEVVIVV
        NLSLGE ++GGLRYG GP L H  WLY+HIGA+M+VV +V
Subjt:  NLSLGEHINGGLRYGFGPRLTHDGWLYMHIGANMEVVIVV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAACGAGAAGGTGATTTCTATAAGGCTACGTGAATGTGTTTTCGTAGCGCCACCTATGGTTAACCTAAGCCTAGGTGAGCATATAAATGGAGGATTGCGATATGG
CTTTGGGCCTAGATTAACCCATGATGGGTGGCTCTATATGCACATAGGAGCAAATATGGAGGTTGTTATTGTGGTAGGTGCTAAGTATGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAACGAGAAGGTGATTTCTATAAGGCTACGTGAATGTGTTTTCGTAGCGCCACCTATGGTTAACCTAAGCCTAGGTGAGCATATAAATGGAGGATTGCGATATGG
CTTTGGGCCTAGATTAACCCATGATGGGTGGCTCTATATGCACATAGGAGCAAATATGGAGGTTGTTATTGTGGTAGGTGCTAAGTATGTGTGA
Protein sequenceShow/hide protein sequence
MVNEKVISIRLRECVFVAPPMVNLSLGEHINGGLRYGFGPRLTHDGWLYMHIGANMEVVIVVGAKYV