; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0014096 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014096
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationtig00001378:380432..384187
RNA-Seq ExpressionIVF0014096
SyntenyIVF0014096
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015794.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]9.80e-18793.54Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIP ASSLGL NSHGKPSNF+PKLKS+LSFPSASSVLKTTA KPSRTL P CSV MT PQTPDA++RGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPLVPVPERVKA+LNY E+SKDP+KFL+PDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY

XP_004146125.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis sativus]1.10e-18592.15Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDF
        MELLSRCSTL P ASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDA+RRGAETDAMGLLLRERIVFLGNSIDDF
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDF

Query:  VADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQ
        VADAIISQLLLLDA+DSTKDIRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG A+DVEIQ
Subjt:  VADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQ

Query:  AREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        AREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KFLTPDVPDDEI+
Subjt:  AREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY

XP_008448589.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo]1.55e-201100Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDF
        MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDF
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDF

Query:  VADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQ
        VADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQ
Subjt:  VADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQ

Query:  AREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        AREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
Subjt:  AREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY

XP_022145352.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica charantia]9.80e-18793.54Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIP ASSL LPNSH KPSNF+PKLKS+LSFPSA SVLK TALKPSRTL  PCSV MTAPQTPD +RRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        QAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPL+PVPERVKA+LNYEE+SKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY

XP_038876611.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispida]7.21e-18994.56Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTL+P ASS+GLP SHGKPSNF PKLKSTLSFPSASSVLKTTA KPSRT  PPCSV MTAPQTPDA+RRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPL+PVPERVKA+LNYEE+SKDP KFL PDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY

TrEMBL top hitse value%identityAlignment
A0A0A0L3S1 ATP-dependent Clp protease proteolytic subunit3.8e-14492.15Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDF
        MELLSRCSTL P ASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDA+RRGAETDAMGLLLRERIVFLGNSIDDF
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDF

Query:  VADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQ
        VADAIISQLLLLDA+DSTKDIRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG A+DVEIQ
Subjt:  VADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQ

Query:  AREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        AREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KFLTPDVPDDEI+
Subjt:  AREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY

A0A1S3BJF4 ATP-dependent Clp protease proteolytic subunit3.3e-156100Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDF
        MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDF
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDF

Query:  VADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQ
        VADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQ
Subjt:  VADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQ

Query:  AREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        AREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
Subjt:  AREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY

A0A6J1CWB9 ATP-dependent Clp protease proteolytic subunit5.8e-14593.54Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIP ASSL LPNSH KPSNF+PKLKS+LSFPSA SVLK TALKPSRTL  PCSV MTAPQTPD +RRGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        QAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPL+PVPERVKA+LNYEE+SKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY

A0A6J1EC18 ATP-dependent Clp protease proteolytic subunit4.9e-14493.2Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIP ASSLGL NSHGKPSNF+PKLKS+LSFPSASSVLKTTA KPSRTL   CSV MT PQTPDA++RGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPLVPVPERVKA+LNY E+SKDP+KFL+PDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY

A0A6J1HNH6 ATP-dependent Clp protease proteolytic subunit6.0e-14292.18Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD
        MELLSRCSTLIP ASSLGL NSHGKPSNF+PKLKS LSFPSASSVLKTTA KPSRTL    SV MT PQTPDA++RGAETDAMGLLLRERIVFLGNSIDD
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPLVPVPERVKA+LNY E+SKDP+KF +PDVPDDEIY
Subjt:  QAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY

SwissProt top hitse value%identityAlignment
O34125 ATP-dependent Clp protease proteolytic subunit 25.0e-5354.97Show/hide
Query:  PQTPDASRRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + S RG    D    LLRERIVFLG  +DD VAD+I++QLL L+A+D  KDI+L+INS GGS++A MAIYD +Q V  DV+TI  G+AAS  + +L
Subjt:  PQTPDASRRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSI
         GG +GKR+A+P+ARIM+HQPLGGA GQA+D+EIQAREI+++K+ +  ++++ TG P EK++ D DRD +MSP EA  YGLID V+ R ++
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSI

Q3ANI8 ATP-dependent Clp protease proteolytic subunit 13.5e-5456.15Show/hide
Query:  PQTPDASRRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + S RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++INS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L
Subjt:  PQTPDASRRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID
         GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI++ K  +  +++E TG P +K+ +D DRD ++SP EAVEYGLID V+D
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q3B0U1 ATP-dependent Clp protease proteolytic subunit 27.7e-5455.61Show/hide
Query:  PQTPDASRRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + S RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI++++NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L
Subjt:  PQTPDASRRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID
         GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P +K+ +D DRD ++SP EAVEYGLID V+D
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q5N1P6 ATP-dependent Clp protease proteolytic subunit 35.0e-5354.97Show/hide
Query:  PQTPDASRRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + S RG    D    LLRERIVFLG  +DD VAD+I++QLL L+A+D  KDI+L+INS GGS++A MAIYD +Q V  DV+TI  G+AAS  + +L
Subjt:  PQTPDASRRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSI
         GG +GKR+A+P+ARIM+HQPLGGA GQA+D+EIQAREI+++K+ +  ++++ TG P EK++ D DRD +MSP EA  YGLID V+ R ++
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSI

Q94B60 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic3.8e-10170.17Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPS--ASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSID
        M  LS  S+L P   S  L +S    S+ FPK  +    P+   S  L+TT+  P R      + +   QT +++ RGAE+D MGLLLRERIVFLG+SID
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPS--ASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSID

Query:  DFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVE
        DFVADAI+SQLLLLDA+D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGASGQAIDVE
Subjt:  DFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVE

Query:  IQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        IQA+E+MHNKNNVT II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGVID DSIIPL PVP+RVK  +NYEE+SKDP KFLTP++PDDEIY
Subjt:  IQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 55.2e-4552.1Show/hide
Query:  LLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVH
        L + RI+  G ++DD +A+ I++QLL LDA D TKDI +++NS GGS++A MAI+D ++ +R DVST+ +G+AAS  + +L  GTKGKR ++PN+RIM+H
Subjt:  LLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVH

Query:  QPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI
        QPLGGA G   D++IQA E++H+K N+   ++  TG   EK+ +D DRD +MS  EA EYGLIDGVI
Subjt:  QPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI

AT1G11750.1 CLP protease proteolytic subunit 67.2e-3941.49Show/hide
Query:  PQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG
        P  P     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++N  GGS  + +AIYD +  ++  V T+A G+AAS  +++L 
Subjt:  PQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG

Query:  GGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRD
        GG KG R AMPN R+M+HQP  G  G   DV  Q  E +  +  + R+ + FTG P EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  GGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRD

AT1G11750.2 CLP protease proteolytic subunit 63.6e-3837.5Show/hide
Query:  NSHGKPSNFFPKLKSTLSFPSASSVLKTT------ALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA
        N  G P     K  S+L  P  + +  +T       ++  +  PP   VM +  TP     G   D   +L R RI+F+G  I+  VA  +ISQL+ L +
Subjt:  NSHGKPSNFFPKLKSTLSFPSASSVLKTT------ALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA

Query:  QDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRI
         D   DI +++N  GGS  + +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G  G   DV  Q  E +  +  + R+
Subjt:  QDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRI

Query:  ISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRD
         + FTG P EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  ISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRD

AT1G66670.1 CLP protease proteolytic subunit 32.2e-5151.31Show/hide
Query:  SVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTA
        S+ +  Q+P       E D   +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+DS +DI LFINS GGS++A M IYD ++  +ADVST+ LG+AAS  
Subjt:  SVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTA

Query:  SIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID
        + +L  G+KGKR  MPN+++M+HQPLG A G+A ++ I+ RE+M++K  + +I S  TG P  +++ D DRD +++P EA EYGLID VID
Subjt:  SIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID

AT5G45390.1 CLP protease P42.7e-10270.17Show/hide
Query:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPS--ASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSID
        M  LS  S+L P   S  L +S    S+ FPK  +    P+   S  L+TT+  P R      + +   QT +++ RGAE+D MGLLLRERIVFLG+SID
Subjt:  MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPS--ASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSID

Query:  DFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVE
        DFVADAI+SQLLLLDA+D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGASGQAIDVE
Subjt:  DFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVE

Query:  IQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY
        IQA+E+MHNKNNVT II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGVID DSIIPL PVP+RVK  +NYEE+SKDP KFLTP++PDDEIY
Subjt:  IQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTCTTTCACGCTGTTCAACTCTTATTCCTCAAGCCTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCTAATTTCTTCCCCAAGCTCAAATCCACTCT
TTCTTTTCCTTCGGCGTCATCAGTACTCAAAACAACCGCTCTTAAACCCTCCAGAACCCTACCTCCGCCGTGCTCCGTTATGACGGCTCCTCAGACTCCGGATGCCTCCC
GGAGAGGCGCTGAAACTGACGCCATGGGATTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTAGCTGATGCTATTATCAGTCAGCTCTTG
CTCCTGGATGCTCAGGACTCTACTAAAGATATCAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGTGCTACCATGGCTATCTACGATGTCGTACAGCTTGTGAGGGC
CGATGTCTCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGTGGTGGCACTAAAGGAAAGCGCCTCGCAATGCCTAATGCACGTATCATGGTTC
ATCAACCTCTTGGAGGAGCGAGTGGGCAAGCAATAGATGTGGAAATTCAAGCACGCGAAATCATGCATAACAAGAACAACGTTACAAGAATCATCTCCGAATTCACTGGC
CATCCATTTGAAAAGGTCCAGAAAGATATCGATAGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATTGATGGAGTAATTGACAGAGACAGCATTAT
ACCTCTCGTGCCAGTGCCCGAAAGAGTGAAAGCAACTTTAAATTATGAAGAAATGAGTAAAGATCCCAGAAAATTCTTGACACCAGACGTCCCTGACGATGAGATATATT
AG
mRNA sequenceShow/hide mRNA sequence
CCCCAAAGTAATCGTCTCTCCACTTCTTCCTCCGTTTCAGAGGTGAAGCAGAGCAGTGGCGTAAATCCATGGAGCTTCTTTCACGCTGTTCAACTCTTATTCCTCAAGCC
TCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCTAATTTCTTCCCCAAGCTCAAATCCACTCTTTCTTTTCCTTCGGCGTCATCAGTACTCAAAACAACCGCTCT
TAAACCCTCCAGAACCCTACCTCCGCCGTGCTCCGTTATGACGGCTCCTCAGACTCCGGATGCCTCCCGGAGAGGCGCTGAAACTGACGCCATGGGATTGCTTCTCAGGG
AGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTAGCTGATGCTATTATCAGTCAGCTCTTGCTCCTGGATGCTCAGGACTCTACTAAAGATATCAGACTCTTC
ATTAATTCCGCTGGCGGCTCTCTCAGTGCTACCATGGCTATCTACGATGTCGTACAGCTTGTGAGGGCCGATGTCTCCACTATTGCACTAGGCATTGCAGCCTCAACAGC
TTCCATAATCCTCGGTGGTGGCACTAAAGGAAAGCGCCTCGCAATGCCTAATGCACGTATCATGGTTCATCAACCTCTTGGAGGAGCGAGTGGGCAAGCAATAGATGTGG
AAATTCAAGCACGCGAAATCATGCATAACAAGAACAACGTTACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAGGTCCAGAAAGATATCGATAGGGATCGT
TATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATTGATGGAGTAATTGACAGAGACAGCATTATACCTCTCGTGCCAGTGCCCGAAAGAGTGAAAGCAACTTTAAA
TTATGAAGAAATGAGTAAAGATCCCAGAAAATTCTTGACACCAGACGTCCCTGACGATGAGATATATTAGTTCCGGACGTAATGACAAATCTTTCTCTAGGGCTTTGATT
TAAATGATTTACATGTAGGATCTTATGTGTAAGCAAAGTCATGGTAGGTGGAAAGCAGAGATATGATGGAATTTAATGAGCTAATCATCTTTAGAGTTTCGACTTTTGGC
GAAATGTCTCTACTTACCAGAAGTTAAAAAAGGTATTGGGAATTCGGACTCTTTTTTTTGCTATGACATTTTTCACATGAGCAATGAGGATGAAAAAATTGATATTGAAT
CA
Protein sequenceShow/hide protein sequence
MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLL
LLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTG
HPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY