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IVF0014099 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014099
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr03:10836585..10837019
RNA-Seq ExpressionIVF0014099
SyntenyIVF0014099
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031630.1 hypothetical protein E6C27_scaffold139G003990 [Cucumis melo var. makuwa]3.19e-2360.92Show/hide
Query:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQS----------RRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTS
        MLQ R+ SS I CNREDRHLKY   + I ISNMLQS           +    PICYIE III NIDH  DHSSL+CCSSEHD D+TS
Subjt:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQS----------RRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTS

KAA0054617.1 hypothetical protein E6C27_scaffold24G004190 [Cucumis melo var. makuwa]2.68e-3761.48Show/hide
Query:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQSP-ICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDD
        MLQLR+ SS I CNRE  HLKY AAK IFISN +Q RRS +   + Y E ++I NI             SEHD+D+TSRPLTLQND+DG++ P  LQVD 
Subjt:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQSP-ICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDD

Query:  DCLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL
          +ASPLPIQEDD+SIAS L IQEDD DATLPPPL
Subjt:  DCLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL

KAA0057644.1 hypothetical protein E6C27_scaffold43054G00140 [Cucumis melo var. makuwa]2.53e-4464.18Show/hide
Query:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDDD
        MLQLR FSSPIG +RED H +Y A+                SPICYIE III N DH GDHSS ICCSS+HD+D+TSRP TLQND+DG+APPPPLQVD+D
Subjt:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDDD

Query:  CLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL
          AS L IQED++SIAS L IQEDD DA L P L
Subjt:  CLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL

KAA0064214.1 hypothetical protein E6C27_scaffold548G001610 [Cucumis melo var. makuwa]2.10e-1743.36Show/hide
Query:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSR-RSCQSPIC--------YIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAP
        +LQ R+ SS I  +RED HL+Y A + IFISN++QS  R  Q  +         YI+ III    H GDHSS +C SSEH +D+TS+P TLQ        
Subjt:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSR-RSCQSPIC--------YIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAP

Query:  PPPLQVDDDCLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL
           LQ +DD  A P P+++D+D        ++DD +ATLP PL
Subjt:  PPPLQVDDDCLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL

TYK19526.1 hypothetical protein E5676_scaffold416G00170 [Cucumis melo var. makuwa]2.53e-4464.18Show/hide
Query:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDDD
        MLQLR FSSPIG +RED H +Y A+                SPICYIE III N DH GDHSS ICCSS+HD+D+TSRP TLQND+DG+APPPPLQVD+D
Subjt:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDDD

Query:  CLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL
          AS L IQED++SIAS L IQEDD DA L P L
Subjt:  CLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL

TrEMBL top hitse value%identityAlignment
A0A5A7URA3 Uncharacterized protein1.1e-3464.18Show/hide
Query:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDDD
        MLQLR FSSPIG +RED H +Y A+                SPICYIE III N DH GDHSS ICCSS+HD+D+TSRP TLQND+DG+APPPPLQVD+D
Subjt:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDDD

Query:  CLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL
          AS L IQED++SIAS L IQEDD DA L P L
Subjt:  CLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL

A0A5A7VAF3 Uncharacterized protein4.9e-1444.06Show/hide
Query:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSR-RSCQ--------SPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAP
        +LQ R+ SS I  +RED HL+Y A + IFISN++QS  R  Q          I YI+ III    H GDHSS +C SSEH +D+TS+P TLQ        
Subjt:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSR-RSCQ--------SPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAP

Query:  PPPLQVDDDCLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL
           LQ +DD  A P P+++D+D        ++DD +ATLP PL
Subjt:  PPPLQVDDDCLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL

A0A5D3BZN7 Uncharacterized protein4.2e-1860.92Show/hide
Query:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQS----------RRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTS
        MLQ R+ SS I CNREDRHLKY   + I ISNMLQS           +    PICYIE III NIDH  DHSSL+CCSSEHD D+TS
Subjt:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQS----------RRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTS

A0A5D3D7G6 Uncharacterized protein1.1e-3464.18Show/hide
Query:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDDD
        MLQLR FSSPIG +RED H +Y A+                SPICYIE III N DH GDHSS ICCSS+HD+D+TSRP TLQND+DG+APPPPLQVD+D
Subjt:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDDD

Query:  CLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL
          AS L IQED++SIAS L IQEDD DA L P L
Subjt:  CLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL

A0A5D3DVX9 Uncharacterized protein1.8e-2961.48Show/hide
Query:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQS-PICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDD
        MLQLR+ SS I CNRE  HLKY AAK IFISN +Q RRS +   + Y E ++I NI             SEHD+D+TSRPLTLQND+DG++ P  LQVD 
Subjt:  MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQS-PICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDD

Query:  DCLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL
          +ASPLPIQEDD+SIAS L IQEDD DATLPPPL
Subjt:  DCLASPLPIQEDDDSIASSLFIQEDDVDATLPPPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAGCTGAGAAAATTTTCATCTCCAATAGGTTGCAACCGAGAAGATCGTCATCTCAAATATGCTGCAGCTAAGAATATCTTCATTTCTAATATGTTGCAGTCGAG
AAGGTCTTGTCAATCTCCAATATGTTACATCGAGGGGATCATCATCTTCAATATCGACCATCATGGGGATCATTCATCTCTAATATGTTGCAGCTCCGAGCATGATAATG
ATAATACATCTCGACCTCTAACTCTCCAAAATGATAACGATGGTAAAGCTCCACCTCCACCTCTCCAAGTAGATGATGATTGTTTAGCTTCGCCTTTGCCTATCCAAGAA
GATGATGACAGTATAGCTTCGTCCCTATTTATCCAAGAAGATGACGTTGATGCAACTTTGCCTCCACCTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCAGCTGAGAAAATTTTCATCTCCAATAGGTTGCAACCGAGAAGATCGTCATCTCAAATATGCTGCAGCTAAGAATATCTTCATTTCTAATATGTTGCAGTCGAG
AAGGTCTTGTCAATCTCCAATATGTTACATCGAGGGGATCATCATCTTCAATATCGACCATCATGGGGATCATTCATCTCTAATATGTTGCAGCTCCGAGCATGATAATG
ATAATACATCTCGACCTCTAACTCTCCAAAATGATAACGATGGTAAAGCTCCACCTCCACCTCTCCAAGTAGATGATGATTGTTTAGCTTCGCCTTTGCCTATCCAAGAA
GATGATGACAGTATAGCTTCGTCCCTATTTATCCAAGAAGATGACGTTGATGCAACTTTGCCTCCACCTCTCTAA
Protein sequenceShow/hide protein sequence
MLQLRKFSSPIGCNREDRHLKYAAAKNIFISNMLQSRRSCQSPICYIEGIIIFNIDHHGDHSSLICCSSEHDNDNTSRPLTLQNDNDGKAPPPPLQVDDDCLASPLPIQE
DDDSIASSLFIQEDDVDATLPPPL