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IVF0014102 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014102
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr04:14908093..14908651
RNA-Seq ExpressionIVF0014102
SyntenyIVF0014102
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034017.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.29e-8593.71Show/hide
Query:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
        MDRWWDLS QKGHP FAFIQRLK LANLIKPWQKEKFHSL+SAK++IIREVDAIDKKELDTPLCQEDSD RLALKAELSDLSLKESQFWFQRAKKLWLKE
Subjt:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE

Query:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
        GDENSAFFHRICSSRQKRNLI EIQDEEGSIQNTNNNISLAF+
Subjt:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
KAA0050815.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.87e-9699.3Show/hide
Query:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
        MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
Subjt:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE

Query:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
        GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAF+
Subjt:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
KAA0058104.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.68e-7886.01Show/hide
Query:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
        M+RWW+LS+Q GHPGF+FIQRLK LANLIKPWQKEKFHSL++AKE+IIREVDAIDK ELDTPL QE+S+ RLALKAEL+DLSLKESQFWFQRAKKLW+KE
Subjt:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE

Query:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
        GDEN AFFHRICSSRQKRNLI EIQ+EEGSIQNTNNNISLAF+
Subjt:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
KAA0063661.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.79e-8190.21Show/hide
Query:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
        M+RWWDLS QKGH GFAFIQRLK LANLIKPWQKEKFHSLSSAKE+II+EVDAIDKKELDT LCQEDSD RLALKAEL+D SLKESQFWFQRAKKLWLKE
Subjt:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE

Query:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
        GDENSAFFHRICSSRQKRN+I EIQDEEGSIQNTN NISLAF+
Subjt:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
TYK05690.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.31e-8294.41Show/hide
Query:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
        MDRWWDLS QKGHPGFAFIQRLK LANLIKPWQKEKFHSL+SAKE+IIREVDAIDKKELDTPLCQEDSD RLALKAELSDLSLKESQFWFQRAKK+WLKE
Subjt:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE

Query:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
        GDENSAFFHRICSSRQKRNLI EIQDEEGSIQNTNNNISLAF+
Subjt:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
TrEMBL top hitse value%identityAlignment
A0A5A7UB20 LINE-1 retrotransposable element ORF2 protein5.2e-7699.3Show/hide
Query:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
        MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
Subjt:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE

Query:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
        GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAF+
Subjt:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
A0A5A7VD46 LINE-1 retrotransposable element ORF2 protein4.4e-6790.21Show/hide
Query:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
        M+RWWDLS QKGH GFAFIQRLK LANLIKPWQKEKFHSLSSAKE+II+EVDAIDKKELDT LCQEDSD RLALKAEL+D SLKESQFWFQRAKKLWLKE
Subjt:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE

Query:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
        GDENSAFFHRICSSRQKRN+I EIQDEEGSIQNTN NISLAF+
Subjt:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
A0A5D3BT10 LINE-1 retrotransposable element ORF2 protein8.5e-7193.71Show/hide
Query:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
        MDRWWDLS QKGHP FAFIQRLK LANLIKPWQKEKFHSL+SAK++IIREVDAIDKKELDTPLCQEDSD RLALKAELSDLSLKESQFWFQRAKKLWLKE
Subjt:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE

Query:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
        GDENSAFFHRICSSRQKRNLI EIQDEEGSIQNTNNNISLAF+
Subjt:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
A0A5D3C2W8 LINE-1 retrotransposable element ORF2 protein2.2e-7194.41Show/hide
Query:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
        MDRWWDLS QKGHPGFAFIQRLK LANLIKPWQKEKFHSL+SAKE+IIREVDAIDKKELDTPLCQEDSD RLALKAELSDLSLKESQFWFQRAKK+WLKE
Subjt:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE

Query:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
        GDENSAFFHRICSSRQKRNLI EIQDEEGSIQNTNNNISLAF+
Subjt:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
A0A5D3C3M3 LINE-1 retrotransposable element ORF2 protein5.7e-6788.81Show/hide
Query:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE
        M+RWW+LSVQ GHPGF+FI+RLK LANLIKPWQKEKFHSL+SAKE+IIREVD+IDK ELDTPL QE+S+ RLALKAELSDLSLKESQFWFQRAKKLWLKE
Subjt:  MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKE

Query:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
        GDENSAFFHRICSSRQKRNLI EIQDEEGSIQNTNNNISLAF+
Subjt:  GDENSAFFHRICSSRQKRNLILEIQDEEGSIQNTNNNISLAFI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.6e-0521.97Show/hide
Query:  WDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRL--ALKAELSDLSLKESQFWFQRAKKLWLKEGD
        W+  +  G   F+  + LK      K   ++ F ++    +  +  +++I  + L  P    DS  R+    + + +  +     F+ Q+++  WL++GD
Subjt:  WDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRL--ALKAELSDLSLKESQFWFQRAKKLWLKEGD

Query:  ENSAFFHRICSSRQKRNLILEIQ-DEEGSIQN
         N+ FFH++  + Q +NLI  ++ D++  ++N
Subjt:  ENSAFFHRICSSRQKRNLILEIQ-DEEGSIQN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGATGGTGGGATCTTTCAGTTCAAAAGGGTCACCCCGGATTTGCCTTCATTCAAAGGCTCAAGTGCTTAGCTAACCTCATCAAACCTTGGCAAAAGGAGAAATT
TCACTCCCTTTCTTCTGCTAAAGAAAGCATTATTAGGGAAGTGGATGCCATTGATAAGAAGGAGTTGGATACCCCGTTGTGTCAAGAAGACAGTGACCATAGACTTGCTC
TAAAAGCTGAGCTCAGTGATCTTTCTCTTAAGGAATCTCAATTCTGGTTCCAAAGGGCTAAAAAGCTTTGGCTTAAAGAGGGAGATGAAAATTCGGCCTTCTTTCACAGA
ATTTGTTCTTCTAGACAGAAGAGAAATCTCATCCTCGAAATTCAGGATGAAGAAGGCTCCATTCAGAATACTAACAATAACATTTCCCTTGCCTTTATTGGTCTTCCCTT
TGTGCCCCCTTCTTGGAGAATGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGATGGTGGGATCTTTCAGTTCAAAAGGGTCACCCCGGATTTGCCTTCATTCAAAGGCTCAAGTGCTTAGCTAACCTCATCAAACCTTGGCAAAAGGAGAAATT
TCACTCCCTTTCTTCTGCTAAAGAAAGCATTATTAGGGAAGTGGATGCCATTGATAAGAAGGAGTTGGATACCCCGTTGTGTCAAGAAGACAGTGACCATAGACTTGCTC
TAAAAGCTGAGCTCAGTGATCTTTCTCTTAAGGAATCTCAATTCTGGTTCCAAAGGGCTAAAAAGCTTTGGCTTAAAGAGGGAGATGAAAATTCGGCCTTCTTTCACAGA
ATTTGTTCTTCTAGACAGAAGAGAAATCTCATCCTCGAAATTCAGGATGAAGAAGGCTCCATTCAGAATACTAACAATAACATTTCCCTTGCCTTTATTGGTCTTCCCTT
TGTGCCCCCTTCTTGGAGAATGAAATAA
Protein sequenceShow/hide protein sequence
MDRWWDLSVQKGHPGFAFIQRLKCLANLIKPWQKEKFHSLSSAKESIIREVDAIDKKELDTPLCQEDSDHRLALKAELSDLSLKESQFWFQRAKKLWLKEGDENSAFFHR
ICSSRQKRNLILEIQDEEGSIQNTNNNISLAFIGLPFVPPSWRMK