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IVF0014108 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014108
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr12:10397343..10404426
RNA-Seq ExpressionIVF0014108
SyntenyIVF0014108
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005488 - binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037172.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.05e-2765.26Show/hide
Query:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARMS-------GLRV--PNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGG
        MLPTSGER   VRNHWKC CSEGNGLS RTS  RPKK RARM        G++   P  SSL FV  I+LS+F A  LRTSTHTP MLPDTFS G
Subjt:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARMS-------GLRV--PNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGG

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]3.36e-4268Show/hide
Query:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARM-------SGLR--VPNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREA
        M PT+GERS GVRNHWKCTCSEGNGL+ RTS   PKK RARM       SG +   P  SSL FV +INLS+F AR  RTSTHT  MLPD FS GIG+EA
Subjt:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARM-------SGLR--VPNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREA

Query:  NSLEGELRCNLKRSKRWPMLPTSGE
        +SLEGEL CN KRSKRW MLPTS E
Subjt:  NSLEGELRCNLKRSKRWPMLPTSGE

TYK15439.1 uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]3.12e-2269.57Show/hide
Query:  PNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREANSLEGELRCNLKRSKRWPMLPTSGE
        P  SS+  V +I LS+FGA + RTSTHTP MLPD FSGGI REA SLEGEL C+ KRS+RWPMLPTSG+
Subjt:  PNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREANSLEGELRCNLKRSKRWPMLPTSGE

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]2.29e-3447.49Show/hide
Query:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARMSGLRV---------PNGSSLHFVFIINLSLFGARILRTSTHTP-----------C---
        MLPTSGERS GVRN WKCTC EGNGLS RTS  RPKK RARM   +          P  S+L  V + +LS+FGA   RTSTHTP           C   
Subjt:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARMSGLRV---------PNGSSLHFVFIINLSLFGARILRTSTHTP-----------C---

Query:  ----------------------------------------MLPDTFSGGIGREANSLEGELRCNLKRSKRWPMLPTSGE
                                                MLPDTFSGGIGREA+SLEGEL C+ K SKRWPMLPT GE
Subjt:  ----------------------------------------MLPDTFSGGIGREANSLEGELRCNLKRSKRWPMLPTSGE

TYK23424.1 gag/pol protein [Cucumis melo var. makuwa]4.56e-3160.34Show/hide
Query:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARMSGLRVPNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREANSLEGELRC
        ML TSGE S GVRN+WK TCSE N L  RTS+V PKK  ARM   + P                     RT THTP MLPDTFS GIGREA+SLEGEL+C
Subjt:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARMSGLRVPNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREANSLEGELRC

Query:  NLKRSKRWPMLPTSGE
        N KRS RWPMLPTSGE
Subjt:  NLKRSKRWPMLPTSGE

TrEMBL top hitse value%identityAlignment
A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein6.4e-3668Show/hide
Query:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARM-------SGLR--VPNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREA
        M PT+GERS GVRNHWKCTCSEGNGL+ RTS   PKK RARM       SG +   P  SSL FV +INLS+F AR  RTSTHT  MLPD FS GIG+EA
Subjt:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARM-------SGLR--VPNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREA

Query:  NSLEGELRCNLKRSKRWPMLPTSGE
        +SLEGEL CN KRSKRW MLPTS E
Subjt:  NSLEGELRCNLKRSKRWPMLPTSGE

A0A5D3CQ36 Putative nuclease HARBI12.6e-2165.26Show/hide
Query:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARM-------SGLR--VPNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGG
        MLPTSGER   VRNHWKC CSEGNGLS RTS  RPKK RARM        G++   P  SSL FV  I+LS+F A  LRTSTHTP MLPDTFS G
Subjt:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARM-------SGLR--VPNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGG

A0A5D3CZ27 ULP_PROTEASE domain-containing protein1.0e-1769.57Show/hide
Query:  PNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREANSLEGELRCNLKRSKRWPMLPTSGE
        P  SS+  V +I LS+FGA + RTSTHTP MLPD FSGGI REA SLEGEL C+ KRS+RWPMLPTSG+
Subjt:  PNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREANSLEGELRCNLKRSKRWPMLPTSGE

A0A5D3DFP2 Uncharacterized protein5.8e-2947.49Show/hide
Query:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARMSGLRV---------PNGSSLHFVFIINLSLFGARILRTSTHTP-----------C---
        MLPTSGERS GVRN WKCTC EGNGLS RTS  RPKK RARM   +          P  S+L  V + +LS+FGA   RTSTHTP           C   
Subjt:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARMSGLRV---------PNGSSLHFVFIINLSLFGARILRTSTHTP-----------C---

Query:  ----------------------------------------MLPDTFSGGIGREANSLEGELRCNLKRSKRWPMLPTSGE
                                                MLPDTFSGGIGREA+SLEGEL C+ K SKRWPMLPT GE
Subjt:  ----------------------------------------MLPDTFSGGIGREANSLEGELRCNLKRSKRWPMLPTSGE

A0A5D3DIF8 Gag/pol protein1.6e-2656.92Show/hide
Query:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARMSGLRVPNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREANSLEGELRC
        ML TSGE S GVRN+WK TCSE N L  RTS+V PKK  ARM   + P                     RT THTP MLPDTFS GIGREA+SLEGEL+C
Subjt:  MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARMSGLRVPNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREANSLEGELRC

Query:  NLKRSKRWPMLPTSGELQIHLQRKKRDELE
        N KRS RWPMLPTSGE   H   +K   LE
Subjt:  NLKRSKRWPMLPTSGELQIHLQRKKRDELE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCAACGAGTGGCGAACGCTCGTGCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGAGCTTGAGGACTTCCAGTGTTCGTCCCAAGAA
AATGCGAGCGAGAATGTCCGGACTCAGGGTCCCCAACGGTTCCTCCCTTCACTTTGTATTCATCATAAATCTTTCGTTGTTCGGGGCTCGTATTCTGAGGACTTCAACCC
ACACTCCTTGCATGCTCCCTGACACATTTTCCGGAGGTATAGGTCGGGAAGCAAACTCATTGGAGGGAGAATTACGATGCAACCTAAAACGGTCCAAAAGATGGCCAATG
CTTCCAACGAGTGGCGAACTTCAAATACACTTGCAGCGAAAGAAACGGGATGAGCTCGAGGAATTCCAGTGTTCGTCCCAACAAAATAGCGAGAATGCCCCGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCAACGAGTGGCGAACGCTCGTGCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGAGCTTGAGGACTTCCAGTGTTCGTCCCAAGAA
AATGCGAGCGAGAATGTCCGGACTCAGGGTCCCCAACGGTTCCTCCCTTCACTTTGTATTCATCATAAATCTTTCGTTGTTCGGGGCTCGTATTCTGAGGACTTCAACCC
ACACTCCTTGCATGCTCCCTGACACATTTTCCGGAGGTATAGGTCGGGAAGCAAACTCATTGGAGGGAGAATTACGATGCAACCTAAAACGGTCCAAAAGATGGCCAATG
CTTCCAACGAGTGGCGAACTTCAAATACACTTGCAGCGAAAGAAACGGGATGAGCTCGAGGAATTCCAGTGTTCGTCCCAACAAAATAGCGAGAATGCCCCGGACTGA
Protein sequenceShow/hide protein sequence
MLPTSGERSCGVRNHWKCTCSEGNGLSLRTSSVRPKKMRARMSGLRVPNGSSLHFVFIINLSLFGARILRTSTHTPCMLPDTFSGGIGREANSLEGELRCNLKRSKRWPM
LPTSGELQIHLQRKKRDELEEFQCSSQQNSENAPD