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IVF0014160 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014160
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr12:21869313..21869708
RNA-Seq ExpressionIVF0014160
SyntenyIVF0014160
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.72e-5880.47Show/hide
Query:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
        MP+GRPRK P AEASNAAREAAM S E DAESSRPHVEGNVEEQLLDRLAQR +  I+  QSD EKK+ IERLKALG+TTF  TTNP +AE WLTLIEKC
Subjt:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC

Query:  FRVMRCSEDRKVELSAFLLQNGAEDWWH
        F+V RCSEDRKVEL+AFLLQNGAEDWWH
Subjt:  FRVMRCSEDRKVELSAFLLQNGAEDWWH

KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.49e-5477.86Show/hide
Query:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
        MPRGRPRK P A+ SNAAREAAM S E DAESSRPHVEGN+EEQLLDRLAQR +S I+S QSD EKK+ IERLKALG+TTF  TTNPA+AEAWLTLIEKC
Subjt:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC

Query:  FRVMRCSEDRKVELSAFLLQNGA----EDWW
        FRV RC EDRKVEL++FLLQNG     EDWW
Subjt:  FRVMRCSEDRKVELSAFLLQNGA----EDWW

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.00e-5278.74Show/hide
Query:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
        MPRG+PRK P AEASNAA+EAAM S E DAESSRP VE NVEEQLLDRLAQR VS I+S QSD EKK+  ERLKALG+TTFA TTNP + EAWLTLIEKC
Subjt:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC

Query:  FRVMRCSEDRKVELSAFLLQNGAEDWW
        FRV R  EDRKVEL+AFLLQN AEDWW
Subjt:  FRVMRCSEDRKVELSAFLLQNGAEDWW

KAA0047616.1 uncharacterized protein E6C27_scaffold115G00890 [Cucumis melo var. makuwa]2.68e-5881.1Show/hide
Query:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
        MPRGRPRK  VAEASNAAREAAM SEE DAESSR HVE NVEEQLLDRLAQ  VS I+S QS+LEK F IERLKALG+TTFA TTN A+AEAWLTLIEKC
Subjt:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC

Query:  FRVMRCSEDRKVELSAFLLQNGAEDWW
        F+VMRC EDRKVEL  FLL+NG EDWW
Subjt:  FRVMRCSEDRKVELSAFLLQNGAEDWW

KAA0056913.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.11e-81100Show/hide
Query:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
        MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
Subjt:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC

Query:  FRVMRCSEDRKVELSAFLLQNGAEDWWHDR
        FRVMRCSEDRKVELSAFLLQNGAEDWWHDR
Subjt:  FRVMRCSEDRKVELSAFLLQNGAEDWWHDR

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein3.8e-4880.47Show/hide
Query:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
        MP+GRPRK P AEASNAAREAAM S E DAESSRPHVEGNVEEQLLDRLAQR +  I+  QSD EKK+ IERLKALG+TTF  TTNP +AE WLTLIEKC
Subjt:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC

Query:  FRVMRCSEDRKVELSAFLLQNGAEDWWH
        F+V RCSEDRKVEL+AFLLQNGAEDWWH
Subjt:  FRVMRCSEDRKVELSAFLLQNGAEDWWH

A0A5A7U067 Retrotrans_gag domain-containing protein5.2e-4581.1Show/hide
Query:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
        MPRGRPRK  VAEASNAAREAAM SEE DAESSR HVE NVEEQLLDRLAQ  VS I+S QS+LEK F IERLKALG+TTFA TTN A+AEAWLTLIEKC
Subjt:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC

Query:  FRVMRCSEDRKVELSAFLLQNGAEDWW
        F+VMRC EDRKVEL  FLL+NG EDWW
Subjt:  FRVMRCSEDRKVELSAFLLQNGAEDWW

A0A5A7ULX5 DNA/RNA polymerases superfamily protein2.9e-64100Show/hide
Query:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
        MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
Subjt:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC

Query:  FRVMRCSEDRKVELSAFLLQNGAEDWWHDR
        FRVMRCSEDRKVELSAFLLQNGAEDWWHDR
Subjt:  FRVMRCSEDRKVELSAFLLQNGAEDWWHDR

A0A5D3BB91 Reverse transcriptase3.4e-4478.74Show/hide
Query:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
        MPRG+PRK P AEASNAA+EAAM S E DAESSRP VE NVEEQLLDRLAQR VS I+S QSD EKK+  ERLKALG+TTFA TTNP + EAWLTLIEKC
Subjt:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC

Query:  FRVMRCSEDRKVELSAFLLQNGAEDWW
        FRV R  EDRKVEL+AFLLQN AEDWW
Subjt:  FRVMRCSEDRKVELSAFLLQNGAEDWW

A0A5D3DES5 DNA/RNA polymerases superfamily protein6.1e-4677.86Show/hide
Query:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC
        MPRGRPRK P A+ SNAAREAAM S E DAESSRPHVEGN+EEQLLDRLAQR +S I+S QSD EKK+ IERLKALG+TTF  TTNPA+AEAWLTLIEKC
Subjt:  MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKC

Query:  FRVMRCSEDRKVELSAFLLQNG----AEDWW
        FRV RC EDRKVEL++FLLQNG     EDWW
Subjt:  FRVMRCSEDRKVELSAFLLQNG----AEDWW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGGGGTAGACCTCGAAAGCGACCTGTTGCAGAAGCTAGTAACGCTGCTAGAGAAGCAGCTATGGAAAGTGAGGAACCTGATGCCGAATCTAGTCGTCCCCATGT
TGAGGGGAATGTGGAAGAGCAATTGCTTGATAGACTGGCTCAAAGATTCGTGTCGAGGATTAAATCGACACAATCAGACCTAGAAAAGAAGTTTGAGATTGAGCGATTGA
AAGCCTTGGGTTCTACCACTTTTGCGAGGACAACAAATCCCGCCAATGCTGAAGCATGGCTTACTTTGATCGAAAAGTGCTTTAGAGTAATGAGATGTTCGGAGGATAGG
AAGGTGGAACTTTCTGCCTTTTTACTCCAAAATGGCGCTGAAGATTGGTGGCACGACAGAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGGGGTAGACCTCGAAAGCGACCTGTTGCAGAAGCTAGTAACGCTGCTAGAGAAGCAGCTATGGAAAGTGAGGAACCTGATGCCGAATCTAGTCGTCCCCATGT
TGAGGGGAATGTGGAAGAGCAATTGCTTGATAGACTGGCTCAAAGATTCGTGTCGAGGATTAAATCGACACAATCAGACCTAGAAAAGAAGTTTGAGATTGAGCGATTGA
AAGCCTTGGGTTCTACCACTTTTGCGAGGACAACAAATCCCGCCAATGCTGAAGCATGGCTTACTTTGATCGAAAAGTGCTTTAGAGTAATGAGATGTTCGGAGGATAGG
AAGGTGGAACTTTCTGCCTTTTTACTCCAAAATGGCGCTGAAGATTGGTGGCACGACAGAAAGTAG
Protein sequenceShow/hide protein sequence
MPRGRPRKRPVAEASNAAREAAMESEEPDAESSRPHVEGNVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKCFRVMRCSEDR
KVELSAFLLQNGAEDWWHDRK