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IVF0014190 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014190
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr08:20620034..20620384
RNA-Seq ExpressionIVF0014190
SyntenyIVF0014190
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038053.1 uncharacterized protein E6C27_scaffold36G002560 [Cucumis melo var. makuwa]4.95e-3063.64Show/hide
Query:  KFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV
        +FP DD+ Y+ I+S  W Y +EEVY ELF+T+EFFEEED +YIL+E N +SGER FESLDLQ KGKKK KPSIEE  +LELK LP HLK    G+ DT+
Subjt:  KFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV

KAA0044273.1 uncharacterized protein E6C27_scaffold2741G00320 [Cucumis melo var. makuwa]7.23e-3798.55Show/hide
Query:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKK
        MKFPIDDKNYTVIKSFGWVYFKE VYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKK
Subjt:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKK

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]1.15e-3669.39Show/hide
Query:  FPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV
        FP DD+N  VI+  GW YF++E Y+ELFST+EFFEE+DP+YIL+E N +S E+KFESLDLQIKG+KK KPSIEE  ELELK LP HLKY YL ENDT+
Subjt:  FPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]4.86e-4071.29Show/hide
Query:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV
        MKFP +D  Y  I+S GW Y KEE Y ELFST+EFFEEEDP+YILEE N M G+ KFESLDL+ KGKKKIK SIEE  E+ELKPLP HLKY YLGENDT+
Subjt:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV

Query:  H
        +
Subjt:  H

TYK05498.1 uncharacterized protein E5676_scaffold83G002090 [Cucumis melo var. makuwa]1.08e-78100Show/hide
Query:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV
        MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV
Subjt:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV

Query:  HHYLCPLGCHRGEGVI
        HHYLCPLGCHRGEGVI
Subjt:  HHYLCPLGCHRGEGVI

TrEMBL top hitse value%identityAlignment
A0A5A7T4Y2 Uncharacterized protein7.6e-2463.64Show/hide
Query:  KFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV
        +FP DD+ Y+ I+S  W Y +EEVY ELF+T+EFFEEED +YIL+E N +SGER FESLDLQ KGKKK KPSIEE  +LELK LP HLK    G+ DT+
Subjt:  KFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV

A0A5A7TL87 Uncharacterized protein7.9e-2998.55Show/hide
Query:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKK
        MKFPIDDKNYTVIKSFGWVYFKE VYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKK
Subjt:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKK

A0A5A7UE99 Uncharacterized protein2.9e-3171.29Show/hide
Query:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV
        MKFP +D  Y  I+S GW Y KEE Y ELFST+EFFEEEDP+YILEE N M G+ KFESLDL+ KGKKKIK SIEE  E+ELKPLP HLKY YLGENDT+
Subjt:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV

Query:  H
        +
Subjt:  H

A0A5A7UF79 Uncharacterized protein1.6e-2969.39Show/hide
Query:  FPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV
        FP DD+N  VI+  GW YF++E Y+ELFST+EFFEE+DP+YIL+E N +S E+KFESLDLQIKG+KK KPSIEE  ELELK LP HLKY YL ENDT+
Subjt:  FPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV

A0A5D3C2R8 Uncharacterized protein3.9e-60100Show/hide
Query:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV
        MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV
Subjt:  MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTV

Query:  HHYLCPLGCHRGEGVI
        HHYLCPLGCHRGEGVI
Subjt:  HHYLCPLGCHRGEGVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTCCCATCGATGATAAAAACTACACCGTAATAAAGTCCTTTGGGTGGGTCTATTTCAAGGAAGAAGTATATGAAGAACTGTTCAGCACTAAAGAATTCTTTGA
AGAAGAGGACCCAAATTATATACTAGAAGAAGAGAACGCCATGTCTGGCGAAAGGAAGTTTGAATCTTTGGACTTGCAAATCAAAGGCAAAAAAAAGATAAAGCCATCAA
TTGAAGAAACACTAGAGCTAGAGCTCAAGCCTTTACCCACCCACCTGAAGTATACATATTTGGGGGAGAATGACACTGTCCATCATTATCTCTGCCCACTTGGATGCCAC
AGAGGAGAAGGCGTTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTCCCATCGATGATAAAAACTACACCGTAATAAAGTCCTTTGGGTGGGTCTATTTCAAGGAAGAAGTATATGAAGAACTGTTCAGCACTAAAGAATTCTTTGA
AGAAGAGGACCCAAATTATATACTAGAAGAAGAGAACGCCATGTCTGGCGAAAGGAAGTTTGAATCTTTGGACTTGCAAATCAAAGGCAAAAAAAAGATAAAGCCATCAA
TTGAAGAAACACTAGAGCTAGAGCTCAAGCCTTTACCCACCCACCTGAAGTATACATATTTGGGGGAGAATGACACTGTCCATCATTATCTCTGCCCACTTGGATGCCAC
AGAGGAGAAGGCGTTATTTAA
Protein sequenceShow/hide protein sequence
MKFPIDDKNYTVIKSFGWVYFKEEVYEELFSTKEFFEEEDPNYILEEENAMSGERKFESLDLQIKGKKKIKPSIEETLELELKPLPTHLKYTYLGENDTVHHYLCPLGCH
RGEGVI