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IVF0014198 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014198
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr02:16445848..16446734
RNA-Seq ExpressionIVF0014198
SyntenyIVF0014198
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026022.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]2.33e-1071.74Show/hide
Query:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKA
        SSG +N+WKCT S+GN LSS TS AR KKT+A MPRTQFSRPG K+
Subjt:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKA
KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]2.74e-1075Show/hide
Query:  RTSSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRP
        + SSGVKN+WKCT  + NRLSS TSS R KKT+ARMPRTQFSRP
Subjt:  RTSSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRP
KAA0037172.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.90e-0968.89Show/hide
Query:  VKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKAVP
        V+N+WKC  S+GN LSS TS AR KKT+ARMP TQFSRPG K+ P
Subjt:  VKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKAVP
KAA0066117.1 mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo var. makuwa]3.18e-1076.74Show/hide
Query:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPG
        SSGV+N+WKCT S+GN LSS TS AR KKT A MPRTQFSRPG
Subjt:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPG
TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]1.61e-1070.83Show/hide
Query:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKAVP
        SSGV+N WKCT  +GN LSS TS AR KKT+ARMP+TQFSRPG K+ P
Subjt:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKAVP
TrEMBL top hitse value%identityAlignment
A0A5A7SLK2 Retrovirus-related Pol polyprotein from transposon 17.61.5e-0771.74Show/hide
Query:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKA
        SSG +N+WKCT S+GN LSS TS AR KKT+A MPRTQFSRPG K+
Subjt:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKA
A0A5A7VGB1 Mitochondrial intermembrane space import and assembly protein 401.5e-0776.74Show/hide
Query:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPG
        SSGV+N+WKCT S+GN LSS TS AR KKT A MPRTQFSRPG
Subjt:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPG
A0A5D3CQ36 Putative nuclease HARBI11.2e-0668.89Show/hide
Query:  VKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKAVP
        V+N+WKC  S+GN LSS TS AR KKT+ARMP TQFSRPG K+ P
Subjt:  VKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKAVP
A0A5D3DFP2 Uncharacterized protein5.0e-0870.83Show/hide
Query:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKAVP
        SSGV+N WKCT  +GN LSS TS AR KKT+ARMP+TQFSRPG K+ P
Subjt:  SSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKAVP
A0A5D3E5W4 NBS-LRR type resistance protein1.1e-0775Show/hide
Query:  RTSSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRP
        + SSGVKN+WKCT  + NRLSS TSS R KKT+ARMPRTQFSRP
Subjt:  RTSSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGCTTCCAATGAGTGGCGAACCTCGTCCGGTGTCAAAAACTACTGGAAATGCACTTGGAGCGATGGAAATAGACTGAGCTCGAGCACTTCTAGTGCTCGTCA
CAAGAAAACGCAAGCGAGAATGCCCCGGACTCAGTTTTCTCGTCCTGGGCAAAAAGCGGTCCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGCTTCCAATGAGTGGCGAACCTCGTCCGGTGTCAAAAACTACTGGAAATGCACTTGGAGCGATGGAAATAGACTGAGCTCGAGCACTTCTAGTGCTCGTCA
CAAGAAAACGCAAGCGAGAATGCCCCGGACTCAGTTTTCTCGTCCTGGGCAAAAAGCGGTCCCCTGA
Protein sequenceShow/hide protein sequence
MANASNEWRTSSGVKNYWKCTWSDGNRLSSSTSSARHKKTQARMPRTQFSRPGQKAVP