; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0014205 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014205
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionspermidine synthase
Genome locationchr10:3046330..3048589
RNA-Seq ExpressionIVF0014205
SyntenyIVF0014205
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR001045 - Spermidine/spermine synthases
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR035246 - Spermidine synthase, tetramerisation domain
IPR037163 - Spermidine synthase, tetramerisation domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51816.1 hypothetical protein Csa_009023 [Cucumis sativus]2.55e-9756.8Show/hide
Query:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL
        MAAE S+ GSAA+KP+   G                  ++P     L+  + LFQGKSDYQDVLVFQ      VLVLDGVIQLTERDECAYQEMITHLPL
Subjt:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL

Query:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKS
             PK     G        GVLREVARH SVEQIDIC          KEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII       G  + 
Subjt:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKS

Query:  FLRSPFCFSCQSSSTRR--CCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF
            PF F+  + + R        AESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYP               VDFKHPVN VEVNGID+A+    F
Subjt:  FLRSPFCFSCQSSSTRR--CCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF

Query:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
                       YN  IHAAAFC   FAKKIIDSK
Subjt:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

NP_001267711.1 spermidine synthase-like [Cucumis sativus]1.68e-9555.92Show/hide
Query:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL
        MAAE S+ GSAA+KP+   G                  ++P     L+  + LFQGKSDYQDVLVFQ      VLVLDGVIQLTERDECAYQEMITHLPL
Subjt:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL

Query:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKS
             PK     G        GVLREVARH SVEQIDIC          KEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII       G  + 
Subjt:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKS

Query:  FLRSPFCFSCQSSSTRR--CCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF
            PF F+  + + R        AE IWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYP               VDFKHPVN  EVNGID+A+    F
Subjt:  FLRSPFCFSCQSSSTRR--CCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF

Query:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
                       YN  IHAAAFC   FAKKIIDS+
Subjt:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

XP_008446225.1 PREDICTED: spermidine synthase [Cucumis melo]4.25e-10659.17Show/hide
Query:  MAAEQSVVGSAANKPRLRMGFLL---------------LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL
        MAAEQSVVGSAANKP++  G                  ++P     L+  + LFQGKSDYQDVLVFQ      VLVLDGVIQLTERDECAYQEMITHLPL
Subjt:  MAAEQSVVGSAANKPRLRMGFLL---------------LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL

Query:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKS
             PK     G        GVLREVARHSSVEQIDIC          KEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII       G  + 
Subjt:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKS

Query:  FLRSPFCFSCQSSSTRR--CCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF
            PF F+  + + R        AESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYP              DVDFKHPVNPVEVNGIDSA+    F
Subjt:  FLRSPFCFSCQSSSTRR--CCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF

Query:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
                       YN  IHAAAFC   FAKKIIDSK
Subjt:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

XP_023004424.1 spermidine synthase [Cucurbita maxima]7.59e-9458.33Show/hide
Query:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI
        L+P     L+  + LFQGKSDYQ+VLVFQ      VLVLDGVIQLTERDECAYQEMITHLPL     PK     G        GVLREVARHSSVEQIDI
Subjt:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI

Query:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKSFLRSPFCFSCQSSSTRR--CCMYSAESIWLHMHIIEDI
        C          KEFFPRVA+G+EDPRVTLH+GDGVAFLKAVPEGTYDA+I       G  +     PF F+  + + R        AESIWLHMHIIEDI
Subjt:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKSFLRSPFCFSCQSSSTRR--CCMYSAESIWLHMHIIEDI

Query:  VTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
        VTNCRQIFKGSVNYAWTTVPTYP               +DFKHPVNPVEVNGID+ +    F               YN  IH AAFC   FAKKIIDSK
Subjt:  VTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

XP_038893068.1 spermidine synthase [Benincasa hispida]9.44e-9755.78Show/hide
Query:  MAAEQSVVGSAAN----KPRLRMGFLL-------------------LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQ
        MAAE SV GSAA+    KP ++ G                      ++P     L+  + LFQGKSDYQ+VLVFQ      VLVLDGVIQLTERDECAYQ
Subjt:  MAAEQSVVGSAAN----KPRLRMGFLL-------------------LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQ

Query:  EMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII----
        EMITHLPL     PK     G        GVLREVARHSSVEQIDIC          KEFFPRVA+GYEDPRVTLHVGDGVAFLKAVPEGTYDAII    
Subjt:  EMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII----

Query:  ---GLHKSFLRSPFCFSCQSSSTRR--CCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGID
           G  +     PF F+  + + R        AESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYP               VDFKHPVNPVEVNGID
Subjt:  ---GLHKSFLRSPFCFSCQSSSTRR--CCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGID

Query:  SARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
        SA+    F               YN  IH+AAFC   FAKKIIDSK
Subjt:  SARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

TrEMBL top hitse value%identityAlignment
A0A0A0KVN4 PABS domain-containing protein2.0e-7856.8Show/hide
Query:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL
        MAAE S +GSAA+KP+   G                  ++P     L+  + LFQGKSDYQDVLVFQ      VLVLDGVIQLTERDECAYQEMITHLPL
Subjt:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL

Query:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKS
             PK     G        GVLREVARH SVEQIDIC          KEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI       IG  + 
Subjt:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKS

Query:  FLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF
            PF F+  + + R        AESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYP               VDFKHPVN VEVNGID+A+    F
Subjt:  FLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF

Query:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
                       YN  IHAAAFC   FAKKIIDSK
Subjt:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

A0A1S3BFD3 spermidine synthase3.8e-8559.17Show/hide
Query:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL
        MAAEQSVVGSAANKP++  G                  ++P     L+  + LFQGKSDYQDVLVFQ      VLVLDGVIQLTERDECAYQEMITHLPL
Subjt:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL

Query:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKS
             PK     G        GVLREVARHSSVEQIDIC          KEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI       IG  + 
Subjt:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKS

Query:  FLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF
            PF F+  + + R        AESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYP              DVDFKHPVNPVEVNGIDSA+    F
Subjt:  FLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF

Query:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
                       YN  IHAAAFC   FAKKIIDSK
Subjt:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

A0A5A7SYP3 Spermidine synthase3.8e-8559.17Show/hide
Query:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL
        MAAEQSVVGSAANKP++  G                  ++P     L+  + LFQGKSDYQDVLVFQ      VLVLDGVIQLTERDECAYQEMITHLPL
Subjt:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL

Query:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKS
             PK     G        GVLREVARHSSVEQIDIC          KEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI       IG  + 
Subjt:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKS

Query:  FLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF
            PF F+  + + R        AESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYP              DVDFKHPVNPVEVNGIDSA+    F
Subjt:  FLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF

Query:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
                       YN  IHAAAFC   FAKKIIDSK
Subjt:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

A0A6J1KW89 spermidine synthase5.5e-7658.33Show/hide
Query:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI
        L+P     L+  + LFQGKSDYQ+VLVFQ      VLVLDGVIQLTERDECAYQEMITHLPL     PK     G        GVLREVARHSSVEQIDI
Subjt:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI

Query:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDI
        C          KEFFPRVA+G+EDPRVTLH+GDGVAFLKAVPEGTYDA+       IG  +     PF F+  + + R        AESIWLHMHIIEDI
Subjt:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDI

Query:  VTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
        VTNCRQIFKGSVNYAWTTVPTYP               +DFKHPVNPVEVNGID+ +    F               YN  IH AAFC   FAKKIIDSK
Subjt:  VTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

Q4L0W6 Spermidine synthase5.0e-7755.92Show/hide
Query:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL
        MAAE S +GSAA+KP+   G                  ++P     L+  + LFQGKSDYQDVLVFQ      VLVLDGVIQLTERDECAYQEMITHLPL
Subjt:  MAAEQSVVGSAANKPRLRMG---------------FLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPL

Query:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKS
             PK     G        GVLREVARH SVEQIDIC          KEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI       IG  + 
Subjt:  AQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKS

Query:  FLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF
            PF F+  + + R        AE IWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYP               VDFKHPVN  EVNGID+A+    F
Subjt:  FLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSF

Query:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
                       YN  IHAAAFC   FAKKIIDS+
Subjt:  TPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

SwissProt top hitse value%identityAlignment
O48659 Spermidine synthase 22.1e-6953.64Show/hide
Query:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI
        L+P     L+  + LFQGKSDYQ+V+VFQ      VLVLDGVIQLTERDECAYQEMITHLPL     PK     G        GVLREV+RHSSVEQIDI
Subjt:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI

Query:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFSCQSSSTRRCC-----MYSAESIWLHMHII
        C          K+FFP VAIGYEDPRV LHVGDGVAFLK VPEGTYDA+       IG  +     PF      S  R  C        AESIWLHMHII
Subjt:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFSCQSSSTRRCC-----MYSAESIWLHMHII

Query:  EDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKII
        EDIV+NCRQIFKGSVNYAWTTVPTYP               VDFK+P+NP++ +         S T  R  L        YN  IH+A+FC   FAK++I
Subjt:  EDIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKII

Query:  DS
        +S
Subjt:  DS

O82147 Spermidine synthase6.7e-7155.59Show/hide
Query:  LFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEF
        LFQGKSDYQ+V+VFQ      VLVLDGVIQLTERDECAYQEMI HLPL     PK     G        GVLREVARH SVEQIDIC          K+F
Subjt:  LFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEF

Query:  FPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNY
        FP VA+G+EDPRV LH+GDGVAFLKAVPEGTYDAI       IG  +     PF F   + + R        AESIWLHMHIIEDIV NCRQIFKGSVNY
Subjt:  FPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNY

Query:  AWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
        AWTTVPTYP               VDFKHP+NP++ N   S  ++               +  YN  IH+AAFC   FAKK+IDSK
Subjt:  AWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

Q96556 Spermidine synthase 11.1e-6853.51Show/hide
Query:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI
        L+P     L+  + LFQGKSDYQ+V+VFQ      VL+LDGVIQLTERDECAYQEMITHLPL     PK     G        GVLREV+RHSSVEQIDI
Subjt:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI

Query:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFS-CQSSSTRRCCMYSAESIWLHMHIIEDIV
        C          K+FFP VAIGYEDPRV LHVGDGVAFLK V EGTYDA+       IG  +     PF  S  ++          AESIWLHMHIIEDIV
Subjt:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFS-CQSSSTRRCCMYSAESIWLHMHIIEDIV

Query:  TNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
         NCRQIFKGSVNYAWTTVPTYP               VDFK+P+NPV+ +         S T  R  L        YN  IH+A+FC   FAK++I+SK
Subjt:  TNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

Q9ZS45 Spermidine synthase3.1e-6853Show/hide
Query:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI
        L+P     L+  + LFQGKSDYQ+VLVFQ      VLVLDGVIQLTERDECAYQEMITHLPL     PK     G        GVLREV+RHSSVEQIDI
Subjt:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI

Query:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFSCQSSSTRRCCMYS--AESIWLHMHIIEDI
        C          K+FFP VA+GYEDPRV LH+GDGVAFLK VP GTYDA+       IG  +     PF F   + + R   + S  AESIWLHMHIIE+I
Subjt:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFSCQSSSTRRCCMYS--AESIWLHMHIIEDI

Query:  VTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
        V NCRQIFKGSVNYAWTTVPTYP               VDFK+P+NP     ID      S  P ++          YN  IH A+FC   FAK++I++K
Subjt:  VTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

Q9ZTR1 Spermidine synthase 11.1e-6854.04Show/hide
Query:  LFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEF
        LFQGKSDYQDV+VFQ      VL+LDGVIQLTERDECAYQEMITHLPL     PK     G        GVLREVARHSSVE+IDIC          KE+
Subjt:  LFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEF

Query:  FPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFS-CQSSSTRRCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYA
        FP +A+G+ DPRVTL++GDGVAFLKA PEGTYDA+       IG  +     PF  S  ++          AESIWLHMHIIEDIV NCRQ+FKGSVNYA
Subjt:  FPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFS-CQSSSTRRCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYA

Query:  WTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
        WTTVPTYP               VDFKHPVNP++ N    A     F               YN  IH+AAFC   FAK+ I SK
Subjt:  WTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

Arabidopsis top hitse value%identityAlignment
AT1G23820.1 spermidine synthase 13.5e-6750.84Show/hide
Query:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI
        ++P     L+  + LFQGKSDYQDV+VFQ      VLVLDGVIQLTERDECAYQEMITHLPL     PK     G        GVLREVARH+S+EQID+
Subjt:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI

Query:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFS-CQSSSTRRCCMYSAESIWLHMHIIEDIV
        C          K+FFP VAIGYEDPRV L +GDGVAFLK   EG+YDA+       IG  K     PF  S  ++          AES+WLHM IIEDIV
Subjt:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFS-CQSSSTRRCCMYSAESIWLHMHIIEDIV

Query:  TNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
        +NCR+IFKGSVNYAWT+VPTYP              DVDFKHP+NP++ +                   S   +  YN  IH+AAFC   FAKK+I+SK
Subjt:  TNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

AT1G23820.2 spermidine synthase 12.7e-5957.4Show/hide
Query:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI
        ++P     L+  + LFQGKSDYQDV+VFQ      VLVLDGVIQLTERDECAYQEMITHLPL     PK     G        GVLREVARH+S+EQID+
Subjt:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI

Query:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFS-CQSSSTRRCCMYSAESIWLHMHIIEDIV
        C          K+FFP VAIGYEDPRV L +GDGVAFLK   EG+YDA+       IG  K     PF  S  ++          AES+WLHM IIEDIV
Subjt:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFS-CQSSSTRRCCMYSAESIWLHMHIIEDIV

Query:  TNCRQIFKGSVNYAWTTVPTYPR
        +NCR+IFKGSVNYAWT+VPTYPR
Subjt:  TNCRQIFKGSVNYAWTTVPTYPR

AT1G70310.1 spermidine synthase 21.7e-6653.5Show/hide
Query:  LFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEF
        LFQGKSDYQDV+VFQ      VLVLDGVIQLTERDECAYQEMITHLPL     PK     G        GVLREVARHSSVEQIDIC          K++
Subjt:  LFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDIC---------FKEF

Query:  FPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNY
        FP VA+GYEDPRV L +GDGVAFLK   EGTYDA+       IG  K     PF F   + + R        AES+WLHM IIEDIV+NCR IFKGSVNY
Subjt:  FPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAI-------IGLHKSFLRSPFCFSCQSSSTR--RCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNY

Query:  AWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK
        AWT+VPTYP               VDFK PV+ ++    D + ++ S  P ++          YN  IH+AAFC   FAKK+IDSK
Subjt:  AWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCC-IFAKKIIDSK

AT5G53120.1 spermidine synthase 32.4e-5242.91Show/hide
Query:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI
        ++P     L+  + LF+ KSD+Q+VLVF+      VLVLDG++QLTE+DECAYQEMI HLPL     PK     G        GVLRE++RHSSVE IDI
Subjt:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI

Query:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKSFLRSPFCFSCQSSSTR----RCCMYSAESIWLHMHIIE
        C          K+FFP +A+G++DPRV LH+GD   FL+  PEG YDAII       G   + +  PF F   + + +     C M  AES+WLH H+IE
Subjt:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKSFLRSPFCFSCQSSSTR----RCCMYSAESIWLHMHIIE

Query:  DIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAF
        D+++ CRQ FK SV+YAW++VPTYP               VDFK+P+NP+E       ++  + T +R       ++  YN ++H AAF
Subjt:  DIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAF

AT5G53120.2 spermidine synthase 32.4e-5242.91Show/hide
Query:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI
        ++P     L+  + LF+ KSD+Q+VLVF+      VLVLDG++QLTE+DECAYQEMI HLPL     PK     G        GVLRE++RHSSVE IDI
Subjt:  LFPLRGSLLEGGEGLFQGKSDYQDVLVFQ------VLVLDGVIQLTERDECAYQEMITHLPLAQFQIPK-----GSSHWWRRCGVLREVARHSSVEQIDI

Query:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKSFLRSPFCFSCQSSSTR----RCCMYSAESIWLHMHIIE
        C          K+FFP +A+G++DPRV LH+GD   FL+  PEG YDAII       G   + +  PF F   + + +     C M  AES+WLH H+IE
Subjt:  C---------FKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAII-------GLHKSFLRSPFCFSCQSSSTR----RCCMYSAESIWLHMHIIE

Query:  DIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAF
        D+++ CRQ FK SV+YAW++VPTYP               VDFK+P+NP+E       ++  + T +R       ++  YN ++H AAF
Subjt:  DIVTNCRQIFKGSVNYAWTTVPTYPR------------TDVDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGGAACAATCCGTCGTCGGGTCGGCAGCGAACAAACCCAGATTGAGAATGGGGTTCCTGCTTCTATTTCCTCTGAGAGGCTCACTCCTTGAAGGTGGAGAAGG
TTTGTTTCAAGGGAAGTCTGATTATCAGGATGTTTTGGTATTTCAGGTTCTGGTTTTGGATGGGGTGATTCAGCTTACTGAGAGAGATGAATGTGCTTATCAAGAGATGA
TCACTCACCTTCCACTTGCTCAATTCCAAATCCCAAAAGGTTCTAGTCATTGGTGGAGGAGATGCGGTGTCTTGCGAGAGGTGGCTCGACATTCATCCGTTGAGCAGATA
GATATCTGTTTCAAAGAATTTTTCCCTCGCGTAGCTATTGGGTACGAGGATCCTCGTGTCACTCTTCATGTTGGTGATGGTGTTGCATTTCTGAAGGCTGTTCCTGAAGG
CACTTATGATGCAATTATAGGCCTGCACAAGAGCTTTTTGAGAAGCCCTTTTTGCTTCAGTTGCCAAAGCTCTTCGACCAGGAGGTGTTGTATGTACTCAGCAGAGAGCA
TCTGGCTTCACATGCATATCATTGAAGACATTGTAACAAACTGCCGCCAGATATTCAAAGGCTCTGTCAACTATGCATGGACTACAGTTCCCACATATCCAAGGACTGAT
GTCGATTTCAAGCATCCAGTAAACCCAGTCGAGGTGAACGGCATTGACTCCGCAAGAGTCCGCTCAAGTTTTACACCTCAGAGGTGGGATCTGTTGTCAACCCTTCAAAT
CTTCTTATATAACATTAATATTCATGCAGCAGCTTTCTGTTGCATCTTTGCGAAGAAGATTATTGATTCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCGGAACAATCCGTCGTCGGGTCGGCAGCGAACAAACCCAGATTGAGAATGGGGTTCCTGCTTCTATTTCCTCTGAGAGGCTCACTCCTTGAAGGTGGAGAAGG
TTTGTTTCAAGGGAAGTCTGATTATCAGGATGTTTTGGTATTTCAGGTTCTGGTTTTGGATGGGGTGATTCAGCTTACTGAGAGAGATGAATGTGCTTATCAAGAGATGA
TCACTCACCTTCCACTTGCTCAATTCCAAATCCCAAAAGGTTCTAGTCATTGGTGGAGGAGATGCGGTGTCTTGCGAGAGGTGGCTCGACATTCATCCGTTGAGCAGATA
GATATCTGTTTCAAAGAATTTTTCCCTCGCGTAGCTATTGGGTACGAGGATCCTCGTGTCACTCTTCATGTTGGTGATGGTGTTGCATTTCTGAAGGCTGTTCCTGAAGG
CACTTATGATGCAATTATAGGCCTGCACAAGAGCTTTTTGAGAAGCCCTTTTTGCTTCAGTTGCCAAAGCTCTTCGACCAGGAGGTGTTGTATGTACTCAGCAGAGAGCA
TCTGGCTTCACATGCATATCATTGAAGACATTGTAACAAACTGCCGCCAGATATTCAAAGGCTCTGTCAACTATGCATGGACTACAGTTCCCACATATCCAAGGACTGAT
GTCGATTTCAAGCATCCAGTAAACCCAGTCGAGGTGAACGGCATTGACTCCGCAAGAGTCCGCTCAAGTTTTACACCTCAGAGGTGGGATCTGTTGTCAACCCTTCAAAT
CTTCTTATATAACATTAATATTCATGCAGCAGCTTTCTGTTGCATCTTTGCGAAGAAGATTATTGATTCAAAATGA
Protein sequenceShow/hide protein sequence
MAAEQSVVGSAANKPRLRMGFLLLFPLRGSLLEGGEGLFQGKSDYQDVLVFQVLVLDGVIQLTERDECAYQEMITHLPLAQFQIPKGSSHWWRRCGVLREVARHSSVEQI
DICFKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAIIGLHKSFLRSPFCFSCQSSSTRRCCMYSAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPRTD
VDFKHPVNPVEVNGIDSARVRSSFTPQRWDLLSTLQIFLYNINIHAAAFCCIFAKKIIDSK