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IVF0014234 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014234
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase_H2C2 domain-containing protein
Genome locationchr04:13342300..13343072
RNA-Seq ExpressionIVF0014234
SyntenyIVF0014234
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038053.1 uncharacterized protein E6C27_scaffold36G002560 [Cucumis melo var. makuwa]1.91e-8888.75Show/hide
Query:  MALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIREFPTDDETYSAIESLRWDYCEEEVYHELFNTEEFFEEED
        MALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIREFPTDDETYSAIESLRWDYCEEEVYHELFNTEEFFEEED
Subjt:  MALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIREFPTDDETYSAIESLRWDYCEEEVYHELFNTEEFFEEED

Query:  LSYILKE-----------SLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTL
        LSYILKE           SLDLQTKGKKKTKPSIEEPPKLELKHLPNHLK    +E DT+
Subjt:  LSYILKE-----------SLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTL

KAA0040570.1 uncharacterized protein E6C27_scaffold262G001400 [Cucumis melo var. makuwa]3.39e-4652.08Show/hide
Query:  ALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIRE--------------------------FPTDDETYSAIES
        AL +  + + + G  EK+ DP+S  IPYSI  M L RAL DL+ SIN M LSI  KL I E                          FP D E+ +AIE 
Subjt:  ALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIRE--------------------------FPTDDETYSAIES

Query:  LRWDYCEEEVYHELFNTEEFFEEEDLSYILKE-----------SLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH
        L WDYCEEE Y+ELF+T+EF EE+   YILKE           SLDLQTKG+ KT+ SIEEPPKLELK LPNHLKYAYLRENDTLP+ I  H
Subjt:  LRWDYCEEEVYHELFNTEEFFEEEDLSYILKE-----------SLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]2.30e-6261.29Show/hide
Query:  ATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIRE------------------------FPTDDETYSAIESLRWDYC
        AT DIFKNG+ EKM +P+SF +P SIG MDLGRALC+L+ SIN M LSIF KLEIRE                        FPTDDE  + IE L W+Y 
Subjt:  ATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIRE------------------------FPTDDETYSAIESLRWDYC

Query:  EEEVYHELFNTEEFFEEEDLSYILKE-----------SLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH
        E+E Y ELF+TEEFFEE+D SYILKE           SLDLQ KG+KKTKPSIEEPP+LELK LPNHLKY YLRENDTLP+ ISTH
Subjt:  EEEVYHELFNTEEFFEEEDLSYILKE-----------SLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]4.43e-3948.44Show/hide
Query:  MDLGRALCDLKASINFMSLSIFMKLEIRE---------------------------------------------------------------FPTDDETY
        MDLGRAL DL ASIN M LSIF KLEI E                                                               FP +D  Y
Subjt:  MDLGRALCDLKASINFMSLSIFMKLEIRE---------------------------------------------------------------FPTDDETY

Query:  SAIESLRWDYCEEEVYHELFNTEEFFEEEDLSYILKE-----------SLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPI
        +AIESL WDYC+EE YHELF+TEEFFEEED SYIL+E           SLDL+TKGKKK K SIEEPP++ELK LPNHLKYAYL ENDTL I
Subjt:  SAIESLRWDYCEEEVYHELFNTEEFFEEEDLSYILKE-----------SLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPI

TYJ99425.1 uncharacterized protein E5676_scaffold316G00120 [Cucumis melo var. makuwa]2.09e-4858.08Show/hide
Query:  MALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIREFPTDDETYSAIESLRWDYCEEEVYHELFNTEEFFEEED
        +ALTQAT +IFKNGV +KM DP SF IPYSIG +DLGRALC+L+A++N + LSIF KL+I E           + L      EE Y+ELF+TEEF EE++
Subjt:  MALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIREFPTDDETYSAIESLRWDYCEEEVYHELFNTEEFFEEED

Query:  LSYILKE-----------SLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH
          Y L+E            LDLQTK +KK KPSI+EP +LELK LPNHLKYAYL ENDTLPIIIS H
Subjt:  LSYILKE-----------SLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH

TrEMBL top hitse value%identityAlignment
A0A5A7T4Y2 Uncharacterized protein6.1e-6992.67Show/hide
Query:  MALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIREFPTDDETYSAIESLRWDYCEEEVYHELFNTEEFFEEED
        MALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIREFPTDDETYSAIESLRWDYCEEEVYHELFNTEEFFEEED
Subjt:  MALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIREFPTDDETYSAIESLRWDYCEEEVYHELFNTEEFFEEED

Query:  LSYILK-----------ESLDLQTKGKKKTKPSIEEPPKLELKHLPNHLK
        LSYILK           ESLDLQTKGKKKTKPSIEEPPKLELKHLPNHLK
Subjt:  LSYILK-----------ESLDLQTKGKKKTKPSIEEPPKLELKHLPNHLK

A0A5A7UE99 Uncharacterized protein2.5e-3048.44Show/hide
Query:  MDLGRALCDLKASINFMSLSIFMKLEIRE---------------------------------------------------------------FPTDDETY
        MDLGRAL DL ASIN M LSIF KLEI E                                                               FP +D  Y
Subjt:  MDLGRALCDLKASINFMSLSIFMKLEIRE---------------------------------------------------------------FPTDDETY

Query:  SAIESLRWDYCEEEVYHELFNTEEFFEEEDLSYILK-----------ESLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPI
        +AIESL WDYC+EE YHELF+TEEFFEEED SYIL+           ESLDL+TKGKKK K SIEEPP++ELK LPNHLKYAYL ENDTL I
Subjt:  SAIESLRWDYCEEEVYHELFNTEEFFEEEDLSYILK-----------ESLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPI

A0A5A7UF79 Uncharacterized protein1.4e-4961.29Show/hide
Query:  ATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIRE------------------------FPTDDETYSAIESLRWDYC
        AT DIFKNG+ EKM +P+SF +P SIG MDLGRALC+L+ SIN M LSIF KLEIRE                        FPTDDE  + IE L W+Y 
Subjt:  ATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIRE------------------------FPTDDETYSAIESLRWDYC

Query:  EEEVYHELFNTEEFFEEEDLSYILK-----------ESLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH
        E+E Y ELF+TEEFFEE+D SYILK           ESLDLQ KG+KKTKPSIEEPP+LELK LPNHLKY YLRENDTLP+ ISTH
Subjt:  EEEVYHELFNTEEFFEEEDLSYILK-----------ESLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH

A0A5D3BM69 Uncharacterized protein5.1e-3958.08Show/hide
Query:  MALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIREFPTDDETYSAIESLRWDYCEEEVYHELFNTEEFFEEED
        +ALTQAT +IFKNGV +KM DP SF IPYSIG +DLGRALC+L+A++N + LSIF KL+I E           + L      EE Y+ELF+TEEF EE++
Subjt:  MALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIREFPTDDETYSAIESLRWDYCEEEVYHELFNTEEFFEEED

Query:  LSYILK-----------ESLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH
          Y L+           E LDLQTK +KK KPSI+EP +LELK LPNHLKYAYL ENDTLPIIIS H
Subjt:  LSYILK-----------ESLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein3.3e-3852.08Show/hide
Query:  ALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIRE--------------------------FPTDDETYSAIES
        AL +  + + + G  EK+ DP+S  IPYSI  M L RAL DL+ SIN M LSI  KL I E                          FP D E+ +AIE 
Subjt:  ALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIRE--------------------------FPTDDETYSAIES

Query:  LRWDYCEEEVYHELFNTEEFFEEEDLSYILK-----------ESLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH
        L WDYCEEE Y+ELF+T+EF EE+   YILK           ESLDLQTKG+ KT+ SIEEPPKLELK LPNHLKYAYLRENDTLP+ I  H
Subjt:  LRWDYCEEEVYHELFNTEEFFEEEDLSYILK-----------ESLDLQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTAACGCAGGCAACAAGAGACATCTTCAAGAATGGGGTGCTAGAGAAGATGATAGACCCTAATAGCTTCTTGATACCCTACTCGATAGGCGGAATGGATTTGGG
TCGTGCTCTATGTGACCTTAAAGCAAGCATCAATTTCATGTCTCTTTCTATCTTCATGAAATTAGAGATAAGGGAGTTCCCCACTGATGATGAAACCTACAGTGCGATAG
AGTCCCTTCGATGGGACTATTGCGAGGAAGAAGTCTATCATGAGCTATTCAACACTGAAGAATTCTTTGAAGAAGAAGACCTAAGTTATATACTGAAAGAATCTTTGGAT
TTGCAAACCAAAGGCAAGAAGAAGACAAAGCCATCAATCGAAGAACCACCAAAGTTAGAGCTCAAGCATTTACCCAATCACCTAAAGTATGCATACTTGAGGGAGAATGA
CACTCTTCCAATCATTATATCCACCCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTAACGCAGGCAACAAGAGACATCTTCAAGAATGGGGTGCTAGAGAAGATGATAGACCCTAATAGCTTCTTGATACCCTACTCGATAGGCGGAATGGATTTGGG
TCGTGCTCTATGTGACCTTAAAGCAAGCATCAATTTCATGTCTCTTTCTATCTTCATGAAATTAGAGATAAGGGAGTTCCCCACTGATGATGAAACCTACAGTGCGATAG
AGTCCCTTCGATGGGACTATTGCGAGGAAGAAGTCTATCATGAGCTATTCAACACTGAAGAATTCTTTGAAGAAGAAGACCTAAGTTATATACTGAAAGAATCTTTGGAT
TTGCAAACCAAAGGCAAGAAGAAGACAAAGCCATCAATCGAAGAACCACCAAAGTTAGAGCTCAAGCATTTACCCAATCACCTAAAGTATGCATACTTGAGGGAGAATGA
CACTCTTCCAATCATTATATCCACCCACTAG
Protein sequenceShow/hide protein sequence
MALTQATRDIFKNGVLEKMIDPNSFLIPYSIGGMDLGRALCDLKASINFMSLSIFMKLEIREFPTDDETYSAIESLRWDYCEEEVYHELFNTEEFFEEEDLSYILKESLD
LQTKGKKKTKPSIEEPPKLELKHLPNHLKYAYLRENDTLPIIISTH