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IVF0014278 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014278
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr12:10295919..10296086
RNA-Seq ExpressionIVF0014278
SyntenyIVF0014278
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]4.27e-2180Show/hide
Query:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
        MSPDEL+GTRTA+VSEGRYVSSGSK+KRGG T DS +++RTAIEYGNEQLN I E
Subjt:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
KAA0052025.1 retrotransposon protein [Cucumis melo var. makuwa]8.17e-2180Show/hide
Query:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
        MSP EL+GTRTA+VSEGRYVSSG KRKRGGQ ADS  V+RTAI+YGNEQLN I E
Subjt:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
KAA0060558.1 retrotransposon protein [Cucumis melo var. makuwa]1.26e-2081.82Show/hide
Query:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
        MSPDEL+GTRTA+VSEGRYVSSGSKRKRGGQ  DS +V+RT IEYGNEQLN I E
Subjt:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
TYK19873.1 retrotransposon protein [Cucumis melo var. makuwa]4.07e-2078.18Show/hide
Query:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
        MSPDELIGTRT +VSEGRY+SSGSK KRGGQ ADS +V RTAIEY NEQLN + E
Subjt:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
TYK20320.1 retrotransposon protein [Cucumis melo var. makuwa]2.17e-2398Show/hide
Query:  LIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
        L+GTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
Subjt:  LIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
TrEMBL top hitse value%identityAlignment
A0A5A7SXX8 Retrotransposon protein2.6e-1480Show/hide
Query:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
        MSPDEL+G R AQVSEGRYVSSGSKRKR GQ  DS +V+RTAIEYGNEQLN I E
Subjt:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
A0A5A7TZA5 Retrotransposon protein1.8e-1580Show/hide
Query:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
        MSPDEL+GTRTA+VSEGRYVSSGSK+KRGG T DS +++RTAIEYGNEQLN I E
Subjt:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
A0A5D3BRF0 Retrotransposon protein1.1e-1581.82Show/hide
Query:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
        MSPDEL+GTRTA+VSEGRYVSSGSKRKRGGQ  DS +V+RT IEYGNEQLN I E
Subjt:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
A0A5D3BZD6 Retrotransposon protein3.4e-1480Show/hide
Query:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
        MSP EL+GTRTA+VSEGRYVSSG KRKRGGQ ADS  V+RTAI+YGNEQLN I E
Subjt:  MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
A0A5D3DA20 Retrotransposon protein1.5e-1798Show/hide
Query:  LIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
        L+GTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
Subjt:  LIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCTGATGAATTGATAGGAACAAGAACCGCTCAGGTAAGTGAGGGTAGGTATGTTTCGAGCGGGTCTAAGCGAAAACGTGGAGGACAAACCGCAGACAGTGTGGA
AGTAATTCGCACTGCGATTGAGTACGGAAATGAACAACTTAACCCAATTGTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCTGATGAATTGATAGGAACAAGAACCGCTCAGGTAAGTGAGGGTAGGTATGTTTCGAGCGGGTCTAAGCGAAAACGTGGAGGACAAACCGCAGACAGTGTGGA
AGTAATTCGCACTGCGATTGAGTACGGAAATGAACAACTTAACCCAATTGTTGAATGA
Protein sequenceShow/hide protein sequence
MSPDELIGTRTAQVSEGRYVSSGSKRKRGGQTADSVEVIRTAIEYGNEQLNPIVE