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IVF0014290 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014290
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationchr05:1385201..1387282
RNA-Seq ExpressionIVF0014290
SyntenyIVF0014290
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647369.1 hypothetical protein Csa_004264 [Cucumis sativus]6.23e-4193.06Show/hide
Query:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQ
        MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFT+ARADRKQQKTDLTEFKKTSLGNE+ELMEA+DK H HQ
Subjt:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQ

KAG6605945.1 hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sororia]1.34e-3453.57Show/hide
Query:  MAARKE-NNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKS------HCHQNIAIIAIAIAIAMNTNTATIT
        M  R E NNRW+SVPEFGGWDHNAPGASNYSVVF++ARA+RKQQKTDLTEFK+ SLGNERE+M   DK       H H++ +          N++ +   
Subjt:  MAARKE-NNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKS------HCHQNIAIIAIAIAIAMNTNTATIT

Query:  TNIIINHPQ------------MTLLKKKKILTYINCCIRP
             +HPQ            +   KKKKILTYINCCIRP
Subjt:  TNIIINHPQ------------MTLLKKKKILTYINCCIRP

XP_022152996.1 lateral signaling target protein 2 homolog [Momordica charantia]8.13e-3178.67Show/hide
Query:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAM--DKSHCHQN
        M ARKEN  WRSVPEFGGWDHNAPGASNYSVVFT+ARA+RKQQKTDLTEFK++SLGNERELM A    + H HQ+
Subjt:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAM--DKSHCHQN

XP_038901151.1 lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida]1.26e-3758.96Show/hide
Query:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAM-------------NT
        MAAR E NRWRSVPEFGGWDHNAPGASNYSVVFT+ARADRKQ+KTDLTEFK+TSLGNERELM A  K H HQ                          + 
Subjt:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAM-------------NT

Query:  NTATITTNIIINHPQMTLLKKKKILTYINCCIRP
        +      +++   PQ    KKKKILTYINCCIRP
Subjt:  NTATITTNIIINHPQMTLLKKKKILTYINCCIRP

XP_038901152.1 lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida]6.06e-3855.24Show/hide
Query:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIINH
        MAAR E NRWRSVPEFGGWDHNAPGASNYSVVFT+ARADRKQ+KTDLTEFK+TSLGNERELM A  K H HQ             + +          +H
Subjt:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIINH

Query:  PQM----------------------TLLKKKKILTYINCCIRP
         Q                        + KKKKILTYINCCIRP
Subjt:  PQM----------------------TLLKKKKILTYINCCIRP

TrEMBL top hitse value%identityAlignment
A0A0A0KK09 AvrRpt-cleavage domain-containing protein6.7e-3162.41Show/hide
Query:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIINH
        MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFT+ARADRKQQKTDLTEFKKTSLGNE+ELMEA+DK H HQ             + +      +   +H
Subjt:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIINH

Query:  ------------PQMTLLKKKKILTYINCCIRP
                      +   KKKKILTYINCCIRP
Subjt:  ------------PQMTLLKKKKILTYINCCIRP

A0A2I4FN34 uncharacterized protein LOC1090005936.3e-2148.28Show/hide
Query:  ENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIINHPQMTL
        E N W SVP+FGGWDH APGA++YSVVF+RARA+RKQ+KTDLT+FK+ S+G EREL+                                   ++H    +
Subjt:  ENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIINHPQMTL

Query:  LKKKKILTYINCCIRP
        ++KKKILTYINCCIRP
Subjt:  LKKKKILTYINCCIRP

A0A2P5CEW3 RIN4, pathogenic type III effector avirulence factor Avr cleavage site4.4e-2247.93Show/hide
Query:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIINH
        M   KE N W S+P+FGGWDH  PG ++YS+VF+RARA+RKQQKTDL+EFK+ SLGNERE + A                                  NH
Subjt:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIINH

Query:  PQMTLLKKKKILTYINCCIRP
           ++++KKKILTYINCCIRP
Subjt:  PQMTLLKKKKILTYINCCIRP

A0A2P5DR09 RIN4, pathogenic type III effector avirulence factor Avr cleavage site4.4e-2247.93Show/hide
Query:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIINH
        M   KE N W S+P+FGGWDH  PG ++YS+VF+RARA+RKQQKTDL+EFK+ SLGNERE + A                                  NH
Subjt:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIINH

Query:  PQMTLLKKKKILTYINCCIRP
           ++++KKKILTYINCCIRP
Subjt:  PQMTLLKKKKILTYINCCIRP

A0A6J1DJD7 lateral signaling target protein 2 homolog8.8e-2378.67Show/hide
Query:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAM--DKSHCHQN
        M ARKEN  WRSVPEFGGWDHNAPGASNYSVVFT+ARA+RKQQKTDLTEFK++SLGNERELM A    + H HQ+
Subjt:  MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAM--DKSHCHQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G48450.1 RPM1-interacting protein 4 (RIN4) family protein6.9e-0448.72Show/hide
Query:  NRWRSVPEFGGWDHNAPG-ASNYSVVFTRARADRKQQKT
        NR R +P+FG WD   PG A  ++V+F +AR D+K  KT
Subjt:  NRWRSVPEFGGWDHNAPG-ASNYSVVFTRARADRKQQKT

AT5G09960.1 FUNCTIONS IN: molecular_function unknown4.3e-0629.13Show/hide
Query:  RKENNRWRSVPEFGGWDHNAPGA-SNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIIN---
        +++N  W SVP+FG WD    G   +YS+ FT+ R  RKQ K D +   + SLGNE EL++  + +                  T+TA +TT    N   
Subjt:  RKENNRWRSVPEFGGWDHNAPGA-SNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIIN---

Query:  ------HPQMTLLKKKKILTYINCCIR
              H   +   ++ + +  NCC++
Subjt:  ------HPQMTLLKKKKILTYINCCIR

AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein5.5e-1740.16Show/hide
Query:  MAARKENNRWRSVPEFGGWDHNAPG-ASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIIN
        M  R+EN  W  VP+FGGWD   P  A+NYSVVF++ARA+RKQ K  +   + +SLG+E+ELM ++ ++H                            ++
Subjt:  MAARKENNRWRSVPEFGGWDHNAPG-ASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIIN

Query:  HPQMT-----LLKKKKILTYINCCIRP
        H   T     ++KKK+ILTYINCCIRP
Subjt:  HPQMT-----LLKKKKILTYINCCIRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTCGGAAGGAGAATAATAGGTGGAGATCAGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCAGGAGCAAGCAATTATTCTGTTGTATTTACTCGAGCTCG
AGCCGATAGAAAACAACAAAAAACTGACTTAACTGAGTTCAAAAAAACCAGCCTAGGGAATGAAAGGGAGTTAATGGAAGCCATGGATAAAAGTCATTGTCACCAAAACA
TCGCCATCATCGCCATCGCCATCGCCATCGCCATGAACACCAACACCGCCACCATCACCACCAACATCATCATCAACCACCCCCAGATGACTCTGTTGAAGAAAAAGAAG
ATTCTGACCTACATCAATTGTTGTATCAGGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTCGGAAGGAGAATAATAGGTGGAGATCAGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCAGGAGCAAGCAATTATTCTGTTGTATTTACTCGAGCTCG
AGCCGATAGAAAACAACAAAAAACTGACTTAACTGAGTTCAAAAAAACCAGCCTAGGGAATGAAAGGGAGTTAATGGAAGCCATGGATAAAAGTCATTGTCACCAAAACA
TCGCCATCATCGCCATCGCCATCGCCATCGCCATGAACACCAACACCGCCACCATCACCACCAACATCATCATCAACCACCCCCAGATGACTCTGTTGAAGAAAAAGAAG
ATTCTGACCTACATCAATTGTTGTATCAGGCCTTGA
Protein sequenceShow/hide protein sequence
MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQNIAIIAIAIAIAMNTNTATITTNIIINHPQMTLLKKKK
ILTYINCCIRP