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IVF0014294 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014294
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:23339405..23339949
RNA-Seq ExpressionIVF0014294
SyntenyIVF0014294
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051981.1 hypothetical protein E6C27_scaffold60G004640 [Cucumis melo var. makuwa]2.05e-3057.04Show/hide
Query:  LLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK--------AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREG
        +LKY A EK+I+SN++Q RRSSS      + CS+K        AEK VVS MLQPR SS QIC  ++   LKY+  + VVVS ML  RMS SQICC REG
Subjt:  LLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK--------AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREG

Query:  RRLKYIATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML
        R LKYIA +KIVVLKYVA +KI+V   LKYV  K +VV  ML
Subjt:  RRLKYIATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML

KAA0064215.1 hypothetical protein E6C27_scaffold548G001630 [Cucumis melo var. makuwa]2.06e-3156.34Show/hide
Query:  LLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK--------AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREG
        +LKY A EK+I+SN++Q RRSSS      + CS+K        AEK VVS MLQPR SS QICC+++   LKY+  + VV+S ML+ RMS SQICC REG
Subjt:  LLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK--------AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREG

Query:  RRLKYIATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML
        R LKY+A +KIVVLKYVA +KI+V   LKYV  K +VV  ML
Subjt:  RRLKYIATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML

KAA0065363.1 Retrotransposon gag protein [Cucumis melo var. makuwa]1.74e-7893.2Show/hide
Query:  RREDLHLHLLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK--------AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLS
        +REDLHLHLLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK        +EKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLS
Subjt:  RREDLHLHLLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK--------AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLS

Query:  QICCSREGRRLKYIATEKIVVLKYVAVKKIVVLKYVAVKKIVVLNML
        QICCSREGRRLKYIATEKIVVLKYVAVKKIVVLKYVAVKKIVVLNML
Subjt:  QICCSREGRRLKYIATEKIVVLKYVAVKKIVVLKYVAVKKIVVLNML

KAA0066592.1 hypothetical protein E6C27_scaffold25G001670 [Cucumis melo var. makuwa]5.07e-3263.55Show/hide
Query:  LKYDATEKVIISNVVQSRRSSSSSSFSH--MHCSRKA-EKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREGRRLKYI
        LKY  TEKV+ SN++ SRRSSS   +     H    A EK VVSNMLQ R SSFQICC+REG RLKYV V+ +VVSNML+SRMS S ICCS+E RRLKY+
Subjt:  LKYDATEKVIISNVVQSRRSSSSSSFSH--MHCSRKA-EKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREGRRLKYI

Query:  ATEKIVV
        A EK++V
Subjt:  ATEKIVV

TYK18585.1 hypothetical protein E5676_scaffold119G001120 [Cucumis melo var. makuwa]6.50e-3156.34Show/hide
Query:  LLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK--------AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREG
        +LKY A EK+I+SN++Q RRSSS      + CS+K        AEK VVS MLQPR SS QICC+++   LKY+  + VV+S ML+ RMS SQICC REG
Subjt:  LLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK--------AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREG

Query:  RRLKYIATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML
        R LKY+A +KIVVLKYVA +KI+V   LKYV  K +VV  ML
Subjt:  RRLKYIATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML

TrEMBL top hitse value%identityAlignment
A0A5A7UEK9 Uncharacterized protein5.5e-2458.39Show/hide
Query:  LLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK---AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREGRRLKY
        +LKY A EK+I+SN++Q RRSSS    S      K   AEK VVS MLQPR SS QIC  ++   LKY+  + VVVS ML  RMS SQICC REGR LKY
Subjt:  LLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK---AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREGRRLKY

Query:  IATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML
        IA +KIVVLKYVA +KI+V   LKYV  K +VV  ML
Subjt:  IATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML

A0A5A7VE92 Uncharacterized protein2.9e-2556.83Show/hide
Query:  LHLLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK---AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREGRRL
        + +LKY A EK+I+SN++Q RRSSS    S      K   AEK VVS MLQPR SS QICC+++   LKY+  + VV+S ML+ RMS SQICC REGR L
Subjt:  LHLLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK---AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREGRRL

Query:  KYIATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML
        KY+A +KIVVLKYVA +KI+V   LKYV  K +VV  ML
Subjt:  KYIATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML

A0A5D3C2C8 Retrotransposon gag protein5.5e-2458.39Show/hide
Query:  LLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK---AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREGRRLKY
        +LKY A EK+I+SN++Q RRSSS    S      K   AEK VVS MLQPR SS QIC  ++   LKY+  + VVVS ML  RMS SQICC REGR LKY
Subjt:  LLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK---AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREGRRLKY

Query:  IATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML
        IA +KIVVLKYVA +KI+V   LKYV  K +VV  ML
Subjt:  IATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML

A0A5D3D4V9 Uncharacterized protein2.9e-2556.83Show/hide
Query:  LHLLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK---AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREGRRL
        + +LKY A EK+I+SN++Q RRSSS    S      K   AEK VVS MLQPR SS QICC+++   LKY+  + VV+S ML+ RMS SQICC REGR L
Subjt:  LHLLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK---AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREGRRL

Query:  KYIATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML
        KY+A +KIVVLKYVA +KI+V   LKYV  K +VV  ML
Subjt:  KYIATEKIVVLKYVAVKKIVV---LKYVAVKKIVVLNML

A0A5D3DBL7 Retrotransposon gag protein6.6e-6293.2Show/hide
Query:  RREDLHLHLLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK--------AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLS
        +REDLHLHLLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK        +EKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLS
Subjt:  RREDLHLHLLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRK--------AEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLS

Query:  QICCSREGRRLKYIATEKIVVLKYVAVKKIVVLKYVAVKKIVVLNML
        QICCSREGRRLKYIATEKIVVLKYVAVKKIVVLKYVAVKKIVVLNML
Subjt:  QICCSREGRRLKYIATEKIVVLKYVAVKKIVVLKYVAVKKIVVLNML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTCAGGCGAGAGGATCTTCATCTTCATCTTCTCAAATATGATGCAACTGAGAAGGTCATCATCTCAAATGTGGTGCAGTCGAGACGATCATCATCTTCATCTTC
ATTTTCTCACATGCATTGCAGCCGGAAGGCCGAGAAGGACGTTGTCTCAAATATGTTACAGCCAAGAATGTCATCATTTCAAATATGTTGCAATCGAGAAGGTCATCGTC
TCAAATATGTTGCAGTCAAGAATGTTGTCGTCTCAAATATGTTGAAGTCGAGAATGTCGTTGTCTCAAATATGTTGCAGTCGAGAAGGTCGTCGTCTCAAATATATTGCG
ACCGAGAAGATCGTCGTTCTTAAATATGTTGCGGTCAAGAAGATCGTCGTTCTTAAATATGTTGCGGTCAAGAAGATCGTCGTCTTAAATATGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTTCAGGCGAGAGGATCTTCATCTTCATCTTCTCAAATATGATGCAACTGAGAAGGTCATCATCTCAAATGTGGTGCAGTCGAGACGATCATCATCTTCATCTTC
ATTTTCTCACATGCATTGCAGCCGGAAGGCCGAGAAGGACGTTGTCTCAAATATGTTACAGCCAAGAATGTCATCATTTCAAATATGTTGCAATCGAGAAGGTCATCGTC
TCAAATATGTTGCAGTCAAGAATGTTGTCGTCTCAAATATGTTGAAGTCGAGAATGTCGTTGTCTCAAATATGTTGCAGTCGAGAAGGTCGTCGTCTCAAATATATTGCG
ACCGAGAAGATCGTCGTTCTTAAATATGTTGCGGTCAAGAAGATCGTCGTTCTTAAATATGTTGCGGTCAAGAAGATCGTCGTCTTAAATATGTTGTAG
Protein sequenceShow/hide protein sequence
MHFRREDLHLHLLKYDATEKVIISNVVQSRRSSSSSSFSHMHCSRKAEKDVVSNMLQPRMSSFQICCNREGHRLKYVAVKNVVVSNMLKSRMSLSQICCSREGRRLKYIA
TEKIVVLKYVAVKKIVVLKYVAVKKIVVLNML