; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0014340 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014340
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionABC transporter C family member 2
Genome locationchr05:20214511..20215321
RNA-Seq ExpressionIVF0014340
SyntenyIVF0014340
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR003439 - ABC transporter-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038845.1 ABC transporter C family member 2 [Cucumis melo var. makuwa]1.77e-6494.31Show/hide
Query:  VGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQSTGV
        VGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQK+IKEEFKSCTML IAHRLNTIIDCDRILLLEFGQVLEYDTP+QLLSNQES FSKIVQSTGV
Subjt:  VGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQSTGV

Query:  TNAQYLHKLVFEGEDNIGPSKEM
        TNAQYLHKLVFEG+DNI  SKEM
Subjt:  TNAQYLHKLVFEGEDNIGPSKEM

KAE8651675.1 hypothetical protein Csa_021219, partial [Cucumis sativus]5.08e-6693.1Show/hide
Query:  SLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQSTGVTNAQYLH
        +LARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTML IAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSN+ES FSK+VQSTGV NAQYLH
Subjt:  SLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQSTGVTNAQYLH

Query:  KLVFEGEDNIGPSKEM
        KLVFEG+DNIG SKEM
Subjt:  KLVFEGEDNIGPSKEM

KAF2310800.1 hypothetical protein GH714_017368 [Hevea brasiliensis]1.82e-5485.22Show/hide
Query:  VGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQSTGV
        VGQRQLLSLARALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRLNTIIDCDRILLL+ GQVLEYDTP++LLSN++S+FSK+VQSTG 
Subjt:  VGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQSTGV

Query:  TNAQYLHKLVF-EGE
         NAQYL  LV  EGE
Subjt:  TNAQYLHKLVF-EGE

MCH91530.1 ABC transporter C family member 2-like [Trifolium medium]9.28e-5475.78Show/hide
Query:  VPCSKIIIKRTIYIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSN
        V C K+      + VGQRQLLSLARALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRLNTIIDCDR+LLL+ G+VLEYDTP++LLSN
Subjt:  VPCSKIIIKRTIYIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSN

Query:  QESSFSKIVQSTGVTNAQYLHKLVFEGE
        + S+FSK+VQSTG  NAQYL  LV  G+
Subjt:  QESSFSKIVQSTGVTNAQYLHKLVFEGE

XP_016548286.1 PREDICTED: ABC transporter C family member 2-like [Capsicum annuum]1.69e-5381.74Show/hide
Query:  VGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQSTGV
        VGQRQLLSLARALLRRSKILVLDEATAAVD++TDALIQKTI+EEFKSCTML IAHRLNTIIDCDRILLL+ GQVLEYDTP+ LL  + S+FS++VQSTG 
Subjt:  VGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQSTGV

Query:  TNAQYLHKLVFEGED
         NAQYL  LVF GE+
Subjt:  TNAQYLHKLVFEGED

TrEMBL top hitse value%identityAlignment
A0A0A0LGU8 Uncharacterized protein4.1e-5479.47Show/hide
Query:  CVFGVVPCSKIIIKRTI---------YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFG
        C   VVPC KI+IK+           + VGQ   ++LARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTML IAHRLNTIIDCDRILLLEFG
Subjt:  CVFGVVPCSKIIIKRTI---------YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFG

Query:  QVLEYDTPKQLLSNQESSFSKIVQSTGVTNAQYLHKLVFEGEDNIGPSKEM
        QVLEYDTPKQLLSN+ES FSK+VQSTGV NAQYLHKLVFEG+DNIG SKEM
Subjt:  QVLEYDTPKQLLSNQESSFSKIVQSTGVTNAQYLHKLVFEGEDNIGPSKEM

A0A2I0A9Y8 ABC transporter C family member 28.5e-4470.21Show/hide
Query:  VFGVVPCSKIIIKRTIYIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQ
        V G++P S ++     + VGQRQLLSLARALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRLNTIIDCDRILLL  G+VLE+D+P+ 
Subjt:  VFGVVPCSKIIIKRTIYIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQ

Query:  LLSNQESSFSKIVQSTGVTNAQYLHKLVFEGEDNIGPSKEM
        LLSN+ES+FSK+VQSTG  NAQYL  LV   + N   S+ +
Subjt:  LLSNQESSFSKIVQSTGVTNAQYLHKLVFEGEDNIGPSKEM

A0A5A7TBT5 ABC transporter C family member 24.1e-5492.8Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQK+IKEEFKSCTML IAHRLNTIIDCDRILLLEFGQVLEYDTP+QLLSNQES FSKIVQST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVFEGEDNIGPSKEM
        GVTNAQYLHKLVFEG+DNI  SKEM
Subjt:  GVTNAQYLHKLVFEGEDNIGPSKEM

A0A6P6AD05 ABC transporter C family member 2-like6.5e-4481.15Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSLARALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRLNTIIDCDRILLL+ G+VLEYDTP++LLSN+ES+FSK+VQST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVF--EGEDNIG
        G  NAQYL  L    EGED +G
Subjt:  GVTNAQYLHKLVF--EGEDNIG

A0A7N2R532 Uncharacterized protein8.5e-4478.23Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSLARALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRLNTIID DRIL+L+ GQVLEYDTP++LLSN+ S+FS+++QST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVFEGEDNIGPSKE
        G TNAQYL  LVFEG++N    +E
Subjt:  GVTNAQYLHKLVFEGEDNIGPSKE

SwissProt top hitse value%identityAlignment
Q42093 ABC transporter C family member 26.5e-4175Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSL+RALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRLNTIIDCD+IL+L+ G+V E+ +P+ LLSN+ SSFSK+VQST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVFEGE
        G  NA+YL  LV + +
Subjt:  GVTNAQYLHKLVFEGE

Q8ST87 ABC transporter C family member 103.7e-2856.67Show/hide
Query:  SKIIIKRTIYIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQES
        SK+      + VGQRQL+ LARALLR+ KILVLDEATA+VD Q+D+LIQ TI+ +F +CT+L IAHRLNTI+D DRI++L+ G++ E+D P  LL NQ  
Subjt:  SKIIIKRTIYIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQES

Query:  SFSKIVQSTGVTNAQYLHKL
          + +V  TG  NA YL KL
Subjt:  SFSKIVQSTGVTNAQYLHKL

Q9C8G9 ABC transporter C family member 11.1e-4074.14Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSLARALLRRSKILVLDEATAAVDV+TD LIQKTI+EEFKSCTML IAHRLNTIIDCD++L+L+ G+V E+ +P+ LLSN ESSFSK+VQST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVFEGE
        G  NA+YL  +  E +
Subjt:  GVTNAQYLHKLVFEGE

Q9C8H0 ABC transporter C family member 121.7e-4174.58Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSLARALLRRSKILVLDEATA+VDV+TD+LIQ+TI+EEFKSCTML IAHRLNTIIDCD+IL+L  GQVLEYD+P++LLS   S+F ++V ST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVFEGEDN
        G  NAQYL  LVFE  +N
Subjt:  GVTNAQYLHKLVFEGEDN

Q9C8H1 ABC transporter C family member 113.2e-4073.73Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSLARALLRRSKIL LDEATA+VDV+TD+LIQ+TI+EEFKSCTML IAHRLNTIIDCD+IL+L  GQVLEYD+P++LLS   S+F K+V ST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVFEGEDN
        G  N QYL  LVFE   N
Subjt:  GVTNAQYLHKLVFEGEDN

Arabidopsis top hitse value%identityAlignment
AT1G30400.1 multidrug resistance-associated protein 17.9e-4274.14Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSLARALLRRSKILVLDEATAAVDV+TD LIQKTI+EEFKSCTML IAHRLNTIIDCD++L+L+ G+V E+ +P+ LLSN ESSFSK+VQST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVFEGE
        G  NA+YL  +  E +
Subjt:  GVTNAQYLHKLVFEGE

AT1G30400.2 multidrug resistance-associated protein 17.9e-4274.14Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSLARALLRRSKILVLDEATAAVDV+TD LIQKTI+EEFKSCTML IAHRLNTIIDCD++L+L+ G+V E+ +P+ LLSN ESSFSK+VQST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVFEGE
        G  NA+YL  +  E +
Subjt:  GVTNAQYLHKLVFEGE

AT1G30410.1 multidrug resistance-associated protein 131.2e-4274.58Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSLARALLRRSKILVLDEATA+VDV+TD+LIQ+TI+EEFKSCTML IAHRLNTIIDCD+IL+L  GQVLEYD+P++LLS   S+F ++V ST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVFEGEDN
        G  NAQYL  LVFE  +N
Subjt:  GVTNAQYLHKLVFEGEDN

AT2G34660.1 multidrug resistance-associated protein 24.6e-4275Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSL+RALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRLNTIIDCD+IL+L+ G+V E+ +P+ LLSN+ SSFSK+VQST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVFEGE
        G  NA+YL  LV + +
Subjt:  GVTNAQYLHKLVFEGE

AT2G34660.2 multidrug resistance-associated protein 24.6e-4275Show/hide
Query:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST
        + VGQRQLLSL+RALLRRSKILVLDEATAAVDV+TDALIQKTI+EEFKSCTML IAHRLNTIIDCD+IL+L+ G+V E+ +P+ LLSN+ SSFSK+VQST
Subjt:  YIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLLSNQESSFSKIVQST

Query:  GVTNAQYLHKLVFEGE
        G  NA+YL  LV + +
Subjt:  GVTNAQYLHKLVFEGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATATATTTTTAATAAATGTGTTTTTGGTGTGGTGCCATGTTCTAAAATAATTATTAAGAGAACGATCTACATTGTTGGGCAAAGGCAACTATTAAGCCTTGCTAG
AGCACTTCTTCGACGATCGAAAATACTTGTTCTTGATGAAGCAACTGCAGCGGTTGATGTACAGACGGATGCCTTAATTCAAAAAACTATTAAGGAAGAGTTTAAATCTT
GTACAATGCTTGCTATTGCACACAGATTAAATACCATCATAGACTGTGATCGGATTCTTCTACTTGAATTTGGACAGGTGTTGGAGTACGACACTCCGAAACAACTTTTA
TCGAATCAAGAAAGTAGTTTCTCAAAGATTGTTCAAAGTACAGGAGTTACAAATGCTCAATACTTGCACAAATTAGTATTTGAAGGTGAAGACAACATAGGACCAAGCAA
GGAAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATATATATTTTTAATAAATGTGTTTTTGGTGTGGTGCCATGTTCTAAAATAATTATTAAGAGAACGATCTACATTGTTGGGCAAAGGCAACTATTAAGCCTTGCTAG
AGCACTTCTTCGACGATCGAAAATACTTGTTCTTGATGAAGCAACTGCAGCGGTTGATGTACAGACGGATGCCTTAATTCAAAAAACTATTAAGGAAGAGTTTAAATCTT
GTACAATGCTTGCTATTGCACACAGATTAAATACCATCATAGACTGTGATCGGATTCTTCTACTTGAATTTGGACAGGTGTTGGAGTACGACACTCCGAAACAACTTTTA
TCGAATCAAGAAAGTAGTTTCTCAAAGATTGTTCAAAGTACAGGAGTTACAAATGCTCAATACTTGCACAAATTAGTATTTGAAGGTGAAGACAACATAGGACCAAGCAA
GGAAATGTGA
Protein sequenceShow/hide protein sequence
MIYIFNKCVFGVVPCSKIIIKRTIYIVGQRQLLSLARALLRRSKILVLDEATAAVDVQTDALIQKTIKEEFKSCTMLAIAHRLNTIIDCDRILLLEFGQVLEYDTPKQLL
SNQESSFSKIVQSTGVTNAQYLHKLVFEGEDNIGPSKEM