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IVF0014344 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014344
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr04:12078052..12078234
RNA-Seq ExpressionIVF0014344
SyntenyIVF0014344
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025278.1 retrotransposon protein [Cucumis melo var. makuwa]1.33e-1362.5Show/hide
Query:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNW
        M+TS+ AP+HVWTKEEE T VECL++LVS G+G+   +   QVTWPNW
Subjt:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNW
KAA0037912.1 retrotransposon protein [Cucumis melo var. makuwa]7.81e-1370Show/hide
Query:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNWYA
        MTTSSCAPKHVWTKEEEDTLVECLVELVSTG        F    WP + A
Subjt:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNWYA
KAA0056508.1 retrotransposon protein [Cucumis melo var. makuwa]7.75e-1568.75Show/hide
Query:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNW
        M+TS+ AP+HVWTKEEEDTL+ECLVELVS GDG+  +    QVTWP+W
Subjt:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNW
KAA0062979.1 retrotransposon protein [Cucumis melo var. makuwa]5.46e-1368.09Show/hide
Query:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPN
        M+TS+CAP+HVWTKEEE TLVECL+ELVS GD +  +V  GQVT P+
Subjt:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPN
TYK05743.1 retrotransposon protein [Cucumis melo var. makuwa]3.73e-1473.91Show/hide
Query:  LSMTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVT
        ++M TSSC PKHVWTK EED +VECLVELVSTGDG+LT+V   QVT
Subjt:  LSMTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVT
TrEMBL top hitse value%identityAlignment
A0A5A7T359 Retrotransposon protein4.7e-0970Show/hide
Query:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNWYA
        MTTSSCAPKHVWTKEEEDTLVECLVELVSTG        F    WP + A
Subjt:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNWYA
A0A5A7VBK0 Retrotransposon protein6.1e-0968.09Show/hide
Query:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPN
        M+TS+CAP+HVWTKEEE TLVECL+ELVS GD +  +V  GQVT P+
Subjt:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPN
A0A5D3C1C7 Retrotransposon protein1.5e-1072.34Show/hide
Query:  LSMTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTW
        ++M TSSC PKHVWTK EED +VECLVELVSTGDG+LT+V   QVT+
Subjt:  LSMTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTW
A0A5D3CAP9 Retrotransposon protein4.7e-0962.5Show/hide
Query:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNW
        M+TS+ AP+HVWTKEEE T VECL++LVS G+G+   +   QVTWPNW
Subjt:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNW
A0A5D3CLR3 Retrotransposon protein8.5e-1168.75Show/hide
Query:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNW
        M+TS+ AP+HVWTKEEEDTL+ECLVELVS GDG+  +    QVTWP+W
Subjt:  MTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTCTTGTTATTTGTGATTCTCAGTATGACAACCTCGTCTTGTGCCCCCAAACATGTATGGACGAAGGAGGAGGAGGACACTCTTGTAGAGTGTTTAGTGGAGTT
GGTGTCCACTGGGGATGGAAGTCTGACAATTGTATGTTTTGGCCAGGTTACCTGGCCCAACTGGTATGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTTCTTGTTATTTGTGATTCTCAGTATGACAACCTCGTCTTGTGCCCCCAAACATGTATGGACGAAGGAGGAGGAGGACACTCTTGTAGAGTGTTTAGTGGAGTT
GGTGTCCACTGGGGATGGAAGTCTGACAATTGTATGTTTTGGCCAGGTTACCTGGCCCAACTGGTATGCATGA
Protein sequenceShow/hide protein sequence
MYFLLFVILSMTTSSCAPKHVWTKEEEDTLVECLVELVSTGDGSLTIVCFGQVTWPNWYA