| GenBank top hits | e value | %identity | Alignment |
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| KAA0040850.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 6.57e-59 | 59.34 | Show/hide |
Query: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKN-----------ATRLSILITPD
MV EGI+L +KIS+A +EVDP KIDV SKLP PS++KPL FLGH GFYRRFI+GFSQI K LSNLLC +Q + F +N IL+T +
Subjt: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKN-----------ATRLSILITPD
Query: WSQPFELICDR----VMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPKLRYTLIILRLDI
W QPFE ICD AMLG KKDKVI+ IYY K N+AQ+NYTTTKKELLAVVFAI+K R+ ++ KL+ TLII R DI
Subjt: WSQPFELICDR----VMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPKLRYTLIILRLDI
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| KAA0060859.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 2.29e-58 | 69.68 | Show/hide |
Query: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNA-TRLSILITPDWSQPFELICD
MVREGI+LRHKISSARIEVDPTKIDVASKLPLPSDV + +K+A T + ILITPDWSQPFELICD
Subjt: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNA-TRLSILITPDWSQPFELICD
Query: RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAP
RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVF+IDKFRSYIIAP
Subjt: RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAP
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| KYP42550.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus cajan] | 5.63e-49 | 50.88 | Show/hide |
Query: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLL-----------CANQLYIFMKNATRLSILITPD
MVREGI+L HK+S IEVDPTK+DV S+LP P +VK +RSFLGH GFY+RFI+ FS+I K LSNLL C + + + ++ +PD
Subjt: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLL-----------CANQLYIFMKNATRLSILITPD
Query: WSQPFELICDR----VMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPKL
W+ FEL+CD V +LG +K+K+ ++I+YASK LNE Q NY TT+KELLA+V+A++KFRSY+I K+
Subjt: WSQPFELICDR----VMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPKL
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| TYK01096.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 4.67e-59 | 71.61 | Show/hide |
Query: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNA-TRLSILITPDWSQPFELICD
MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDV + +K+A T +SILITPDWSQPFELICD
Subjt: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNA-TRLSILITPDWSQPFELICD
Query: RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAP
RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAP
Subjt: RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAP
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| TYK26567.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 1.30e-52 | 61.54 | Show/hide |
Query: EGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNATRLSILITPDWSQPFELICDR---
EGI+L HKIS+ +EVDP KIDV SKLP PS+VKPLRSFLG+ FYRRFI+GFSQI K LS S+L+ PDWSQPFEL+CD
Subjt: EGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNATRLSILITPDWSQPFELICDR---
Query: -VMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPK
V M G KKDKV IYYA KTLNEA++NYTT +KELLA+VFAI+KFRSYI+ K
Subjt: -VMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A445EDS7 Reverse transcriptase | 1.2e-41 | 54.39 | Show/hide |
Query: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNA-----------TRLSILITPD
MV EGI+L HKIS+ IEVD K+++ KLP PS+VK +RSFLGH GFYRRFIR FS+I K LSNLL ++ ++F KN + I+ PD
Subjt: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNA-----------TRLSILITPD
Query: WSQPFELICD----RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPKL
W+ PFEL+CD + A+LG +KD ++++IYYASK LN+ Q+NYTTT+KELLA+VFA DKFRSY+I K+
Subjt: WSQPFELICD----RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPKL
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| A0A5A7V574 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.7e-45 | 69.68 | Show/hide |
Query: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNA-TRLSILITPDWSQPFELICD
MVREGI+LRHKISSARIEVDPTKIDVASKLPLPSDV + +K+A T + ILITPDWSQPFELICD
Subjt: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNA-TRLSILITPDWSQPFELICD
Query: RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAP
RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVF+IDKFRSYIIAP
Subjt: RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAP
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| A0A5D3BS70 Retrovirus-related Pol polyprotein from transposon 17.6 | 7.1e-47 | 71.61 | Show/hide |
Query: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNA-TRLSILITPDWSQPFELICD
MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDV + +K+A T +SILITPDWSQPFELICD
Subjt: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNA-TRLSILITPDWSQPFELICD
Query: RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAP
RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAP
Subjt: RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAP
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| A0A5D3D3M4 Retrovirus-related Pol polyprotein from transposon 17.6 | 4.6e-46 | 59.34 | Show/hide |
Query: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKN-----------ATRLSILITPD
MV EGI+L +KIS+A +EVDP KIDV SKLP PS++KPL FLGH GFYRRFI+GFSQI K LSNLLC +Q + F +N IL+T +
Subjt: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKN-----------ATRLSILITPD
Query: WSQPFELICD----RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPKLRYTLIILRLDI
W QPFE ICD AMLG KKDKVI+ IYY K N+AQ+NYTTTKKELLAVVFAI+K R+ ++ KL+ TLII R DI
Subjt: WSQPFELICD----RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPKLRYTLIILRLDI
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| A0A6P5U2U9 uncharacterized protein LOC110774242 | 2.0e-41 | 53.22 | Show/hide |
Query: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLL-----------CANQLYIFMKNATRLSILITPD
MV+EGI+L HKIS+ IEVD KID KLP P+ VK +RSFLGH GFYRRFI+ FS+ITK L NLL C + + T I++ PD
Subjt: MVREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLL-----------CANQLYIFMKNATRLSILITPD
Query: WSQPFELICD----RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPKL
W PFE++CD V A+LG +++K++++IYYAS+TLN+AQ+NYTTT+KELLAV+F++DKFRSY+I K+
Subjt: WSQPFELICD----RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYIIAPKL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 9.6e-17 | 34.57 | Show/hide |
Query: REGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLY---------IFMKNATRLS---ILITPDW
+E L H ++ I+ +P KI+ K P+P+ K +++FLG TG+YR+FI F+ I K ++ L N F K +S IL PD+
Subjt: REGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLY---------IFMKNATRLS---ILITPDW
Query: SQPFELICDRVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYII
++ F L D LG + + + Y S+TLNE + NY+T +KELLA+V+A FR Y++
Subjt: SQPFELICDRVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYII
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 1.9e-09 | 28.48 | Show/hide |
Query: VREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCAN----------QLYIFMKN-ATRLSILITPDW
+ E L HK + I D K DV P+P D R F+ +YRRFI+ F+ ++ ++ L N + +I +K+ ++L PD+
Subjt: VREGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCAN----------QLYIFMKN-ATRLSILITPDW
Query: SQPFELICDRVM----AMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYI
S+ F + D A+L + + YAS+ + + N +TT++EL A+ +AI FR YI
Subjt: SQPFELICDRVM----AMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYI
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 5.1e-10 | 26.99 | Show/hide |
Query: ISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLL---------------------CANQLYIFMKN--ATRLSILITP
+S + DP K+ + P P V +RSFLG +YR FI+ F+ I + ++++L + ++N A+ IL P
Subjt: ISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLL---------------------CANQLYIFMKN--ATRLSILITP
Query: DWSQPFELICDRVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYI
D+ +PF+L D + +G + I S+TL + ++NY T ++ELLA+V+A+ K ++++
Subjt: DWSQPFELICDRVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYI
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 5.8e-14 | 30.86 | Show/hide |
Query: REGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLL-----CANQLYIFMKNATRLSILI-------TPDW
+E L H ++ I+ +P K+ P+P+ K +R+FLG TG+YR+FI ++ I K +++ L Q +++ +L LI PD+
Subjt: REGIMLRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLL-----CANQLYIFMKNATRLSILI-------TPDW
Query: SQPFELICDRVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYII
+ F L D LG + + I + S+TLN+ + NY+ +KELLA+V+A FR Y++
Subjt: SQPFELICDRVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYII
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.2e-14 | 29.07 | Show/hide |
Query: LRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNATRLSILIT--------------------
L + +++ I+ DP K+ S++P P+ VK L+ FLG T +YR+FI+ ++++ K L+NL LY +K++ + IT
Subjt: LRHKISSARIEVDPTKIDVASKLPLPSDVKPLRSFLGHTGFYRRFIRGFSQITKLLSNLLCANQLYIFMKNATRLSILIT--------------------
Query: ----PDWSQPFELICD----RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYI
P +++PF L D + A+L I Y S++LN+ ++NY T +KE+LA+++++D R+Y+
Subjt: ----PDWSQPFELICD----RVMAMLGPKKDKVIYLIYYASKTLNEAQKNYTTTKKELLAVVFAIDKFRSYI
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