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IVF0014374 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014374
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr01:19885919..19886209
RNA-Seq ExpressionIVF0014374
SyntenyIVF0014374
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.32e-3978.43Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL
        MNCVLATENEKLREEVKKWVQQAVN QR LD+AKRK+LELEK NDSLNTEAIQVRKKNKRLLRNIA+LHEE+EA+KV I      I +LNG+ +EFQ AL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL

Query:  RE
         E
Subjt:  RE

KAA0041903.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.64e-40100Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKK
        MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKK
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKK

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.10e-4180.39Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL
        MNCVLATENEKLREEVKKWVQQAVNTQR LD+AKRK+LELEK NDSLNTEAIQ+RKKNKRLLRNIA+LHEE+EAKKV I      I +LNG+A+EFQ AL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL

Query:  RE
         E
Subjt:  RE

TYK07484.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.63e-3980.39Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL
        MNCVLATENEKLREEVKKWVQQAVNTQ  LD+AKRK+LELEK NDSLNTEAIQVRKKNKRLLRNI +LHEE+EAKKV I      + RLNGVA+EFQ AL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL

Query:  RE
         E
Subjt:  RE

TYK09458.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.45e-3980.39Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL
        MNCVLATENEKL EEVKKWVQQAVNT R LD+AK+K+LELEK NDSLNTEAIQVRKKNKRLLRNIADLHE +EAKKV I      I RLNGVA+EFQ AL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL

Query:  RE
         E
Subjt:  RE

TrEMBL top hitse value%identityAlignment
A0A5A7SGB8 Glial fibrillary acidic protein-like2.2e-3280.39Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL
        MNCVLATENEKLREEVKKWVQQAVNTQ  LD+AKRK+LELEK NDSLNTEAIQVRKKNKRLLRNI +LHEE+EAKKV I      + RLNGVA+EFQ AL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL

Query:  RE
         E
Subjt:  RE

A0A5A7SM49 Glial fibrillary acidic protein-like1.4e-3178.43Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL
        MNCVLATENEKLREEVKKWVQQAVN QR LD+AKRK+LELEK NDSLNTEAIQVRKKNKRLLRNIA+LHEE+EA+KV I      I +LNG+ +EFQ AL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL

Query:  RE
         E
Subjt:  RE

A0A5A7TFC7 Glial fibrillary acidic protein-like7.0e-31100Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKK
        MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKK
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKK

A0A5A7VDD9 Glial fibrillary acidic protein-like7.4e-3380.39Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL
        MNCVLATENEKLREEVKKWVQQAVNTQR LD+AKRK+LELEK NDSLNTEAIQ+RKKNKRLLRNIA+LHEE+EAKKV I      I +LNG+A+EFQ AL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL

Query:  RE
         E
Subjt:  RE

A0A5D3C8B8 Glial fibrillary acidic protein-like2.2e-3280.39Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL
        MNCVLATENEKLREEVKKWVQQAVNTQ  LD+AKRK+LELEK NDSLNTEAIQVRKKNKRLLRNI +LHEE+EAKKV I      + RLNGVA+EFQ AL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYI------IGRLNGVAIEFQKAL

Query:  RE
         E
Subjt:  RE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAACAAGCTGTTAATACTCAAAGAGCTTTGGACAAGGCGAAACGAAAGCA
ATTGGAGCTGGAGAAGAATAATGATTCTTTAAACACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAACATTGCTGACTTACATGAAGAGATGGAAG
CTAAAAAGGTATACATTATTGGAAGATTGAATGGGGTTGCTATAGAATTCCAAAAAGCATTACGTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAACAAGCTGTTAATACTCAAAGAGCTTTGGACAAGGCGAAACGAAAGCA
ATTGGAGCTGGAGAAGAATAATGATTCTTTAAACACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAACATTGCTGACTTACATGAAGAGATGGAAG
CTAAAAAGGTATACATTATTGGAAGATTGAATGGGGTTGCTATAGAATTCCAAAAAGCATTACGTGAATGA
Protein sequenceShow/hide protein sequence
MNCVLATENEKLREEVKKWVQQAVNTQRALDKAKRKQLELEKNNDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVYIIGRLNGVAIEFQKALRE