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IVF0014392 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014392
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionphosphopantothenoylcysteine decarboxylase subunit VHS3-like
Genome locationchr02:16038134..16038298
RNA-Seq ExpressionIVF0014392
SyntenyIVF0014392
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037362.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]5.61e-0968.09Show/hide
Query:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDED
        ++EDD IDDDPIDF  VKDE D SID +C EDEDDDPI+C   ED+D
Subjt:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDED

KAA0039603.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]3.66e-0963.79Show/hide
Query:  MEEDDLID--------DDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDDP
        MEEDD ID        DD IDF  +K EDD SID N  EDED DPI+C+CIEDEDDDP
Subjt:  MEEDDLID--------DDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDDP

KAA0047506.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]3.81e-0865.31Show/hide
Query:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDD
        ME+DD IDDDPI+F C++DEDD  IDF+  ED+DDD I+   IEDEDDD
Subjt:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDD

XP_008456992.1 PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]2.01e-0852Show/hide
Query:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNCT-----------------------EDEDDDPINCDCIEDEDDDPTG
        ME+DDLIDDDPIDF  +KDEDD SIDF                          EDEDDD I+CD IED+DDDP G
Subjt:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNCT-----------------------EDEDDDPINCDCIEDEDDDPTG

XP_016902073.1 PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]1.58e-0863.79Show/hide
Query:  MEEDDLID--------DDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDDP
        MEEDD ID        DD IDF  +K EDD SID N  EDED DPI+C+CIEDEDDDP
Subjt:  MEEDDLID--------DDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDDP

TrEMBL top hitse value%identityAlignment
A0A1S3C4K1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like3.7e-0552Show/hide
Query:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNC-----------------------TEDEDDDPINCDCIEDEDDDPTG
        ME+DDLIDDDPIDF  +KDEDD SIDF                          EDEDDD I+CD IED+DDDP G
Subjt:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNC-----------------------TEDEDDDPINCDCIEDEDDDPTG

A0A1S4E1H3 phosphopantothenoylcysteine decarboxylase subunit VHS3-like1.7e-0563.79Show/hide
Query:  MEEDDLI--------DDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDDP
        MEEDD I        DDD IDF  +K EDD SID N  EDED DPI+C+CIEDEDDDP
Subjt:  MEEDDLI--------DDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDDP

A0A5A7T1P1 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like2.8e-0546.25Show/hide
Query:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINC----------------------------DCIEDEDDDPTG
        ++EDD IDDDPIDF  VKDE D SID +C EDEDDDPI+C                            +C++DEDDDP G
Subjt:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINC----------------------------DCIEDEDDDPTG

A0A5D3BPS5 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like1.7e-0563.79Show/hide
Query:  MEEDDLI--------DDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDDP
        MEEDD I        DDD IDF  +K EDD SID N  EDED DPI+C+CIEDEDDDP
Subjt:  MEEDDLI--------DDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDDP

A0A5D3DQ88 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like3.7e-0552Show/hide
Query:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNC-----------------------TEDEDDDPINCDCIEDEDDDPTG
        ME+DDLIDDDPIDF  +KDEDD SIDF                          EDEDDD I+CD IED+DDDP G
Subjt:  MEEDDLIDDDPIDFKCVKDEDDYSIDFNC-----------------------TEDEDDDPINCDCIEDEDDDPTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGATGATCTTATCGACGATGATCCTATCGACTTCAAATGTGTTAAAGATGAAGATGATTATTCTATCGACTTCAACTGCACTGAGGATGAAGATGATGATCC
TATCAACTGCGACTGCATTGAGGATGAAGATGATGATCCTACTGGCTTGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGATGATCTTATCGACGATGATCCTATCGACTTCAAATGTGTTAAAGATGAAGATGATTATTCTATCGACTTCAACTGCACTGAGGATGAAGATGATGATCC
TATCAACTGCGACTGCATTGAGGATGAAGATGATGATCCTACTGGCTTGCATTGA
Protein sequenceShow/hide protein sequence
MEEDDLIDDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDDPTGLH