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IVF0014394 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014394
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr01:5856577..5856750
RNA-Seq ExpressionIVF0014394
SyntenyIVF0014394
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]6.65e-0864.86Show/hide
Query:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKR
        MANAC E+FGD+++L +ITSI C PK EQVWV G +R
Subjt:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKR

KAA0032002.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]3.79e-0956.82Show/hide
Query:  NACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRLSPLKENYY
        N C EEFGD +H G+ITSI C P+  QVW +GA+RL  L E +Y
Subjt:  NACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRLSPLKENYY

KAA0062632.1 uncharacterized protein E6C27_scaffold79G001430 [Cucumis melo var. makuwa]3.57e-0657.89Show/hide
Query:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRL
        MAN   EEF +K+HLG+ TSI C PK  QVW +G +RL
Subjt:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRL

TYJ98051.1 LINE-1 reverse transcriptase isogeny [Cucumis melo var. makuwa]1.84e-0556.76Show/hide
Query:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKR
        MAN   EEF +K+HLG+ TSI C PK  QVW +G +R
Subjt:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKR

TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]5.64e-1970.18Show/hide
Query:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRLSPLKENYYKSCKQQLLDLY
        MAN C EEF   +H+ EITSITC PK EQVWVL A+RL PLKE YYKS KQQL D+Y
Subjt:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRLSPLKENYYKSCKQQLLDLY

TrEMBL top hitse value%identityAlignment
A0A5A7V332 Uncharacterized protein4.3e-0457.89Show/hide
Query:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRL
        MAN   EEF +K+HLG+ TSI C PK  QVW +G +RL
Subjt:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRL

A0A5D3C951 Uncharacterized protein2.7e-1470.18Show/hide
Query:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRLSPLKENYYKSCKQQLLDLY
        MAN C EEF   +H+ EITSITC PK EQVWVL A+RL PLKE YYKS KQQL D+Y
Subjt:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRLSPLKENYYKSCKQQLLDLY

A0A5D3CY29 Transposon Ty3-I Gag-Pol polyprotein3.5e-0656.82Show/hide
Query:  NACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRLSPLKENYY
        N C EEFGD +H G+ITSI C P+  QVW +GA+RL  L E +Y
Subjt:  NACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRLSPLKENYY

A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein7.9e-0664.86Show/hide
Query:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKR
        MANAC E+FGD+++L +ITSI C PK EQVWV G +R
Subjt:  MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATGCATGCAATGAGGAGTTTGGGGACAAAATCCACCTTGGTGAGATAACTTCCATCACTTGTGACCCAAAAGCAGAACAAGTGTGGGTACTTGGCGCCAAGAG
GTTGTCACCCTTAAAAGAGAATTACTATAAATCTTGTAAGCAACAACTCCTAGATTTATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATGCATGCAATGAGGAGTTTGGGGACAAAATCCACCTTGGTGAGATAACTTCCATCACTTGTGACCCAAAAGCAGAACAAGTGTGGGTACTTGGCGCCAAGAG
GTTGTCACCCTTAAAAGAGAATTACTATAAATCTTGTAAGCAACAACTCCTAGATTTATATTGA
Protein sequenceShow/hide protein sequence
MANACNEEFGDKIHLGEITSITCDPKAEQVWVLGAKRLSPLKENYYKSCKQQLLDLY