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IVF0014403 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014403
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr11:6369147..6369320
RNA-Seq ExpressionIVF0014403
SyntenyIVF0014403
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0035196 - production of miRNAs involved in gene silencing by miRNA (biological process)
GO:1903730 - regulation of phosphatidate phosphatase activity (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAS80151.1 ACT11D09.5 [Cucumis melo]4.40e-19100Show/hide
Query:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY
        MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY
Subjt:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY
KAA0043024.1 ACT11D09.5 [Cucumis melo var. makuwa]1.05e-2896.49Show/hide
Query:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP
        MAMRMIEHMESISSLTIT+SSKCIMIVTEKVSLMRNFIKMSDPMKAAYC+VLFCGDP
Subjt:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP
KAA0053375.1 retrotransposon protein [Cucumis melo var. makuwa]5.36e-1774.51Show/hide
Query:  MIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCG
        MI+HME+ISSLT+ E SKCIM+V +KVSLMR+FIKMSDPMKA YC++LF G
Subjt:  MIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCG
TYK06495.1 ACT11D09.5 [Cucumis melo var. makuwa]1.14e-21100Show/hide
Query:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCK
        MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCK
Subjt:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCK
TYK28753.1 retrotransposon protein [Cucumis melo var. makuwa]2.57e-1670.18Show/hide
Query:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP
        M  ++IE+M+SI SLT+ E SKC++IVTEKVSLMRNFIKMSDPMK AYC+VL   DP
Subjt:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP
TrEMBL top hitse value%identityAlignment
A0A5A7TI58 ACT11D09.52.3e-2196.49Show/hide
Query:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP
        MAMRMIEHMESISSLTIT+SSKCIMIVTEKVSLMRNFIKMSDPMKAAYC+VLFCGDP
Subjt:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP
A0A5A7TWZ4 Retrotransposon protein2.5e-1270.18Show/hide
Query:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP
        M  ++IE+M+SI SLT+ E SKC++IVTEKVSLMRNFIKMSDPMK AYC+VL   DP
Subjt:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP
A0A5D3C544 ACT11D09.53.4e-17100Show/hide
Query:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCK
        MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCK
Subjt:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCK
A0A5D3DYD1 Retrotransposon protein2.5e-1270.18Show/hide
Query:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP
        M  ++IE+M+SI SLT+ E SKC++IVTEKVSLMRNFIKMSDPMK AYC+VL   DP
Subjt:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP
Q6E437 ACT11D09.51.4e-15100Show/hide
Query:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY
        MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY
Subjt:  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCGGATGATAGAGCATATGGAGTCCATCTCGAGCCTTACTATCACGGAGAGTAGTAAGTGCATCATGATAGTGACAGAGAAGGTGTCGCTCATGAGAAACTT
CATCAAGATGTCTGATCCAATGAAGGCTGCTTACTGTAAGGTCCTCTTCTGCGGTGACCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGCGGATGATAGAGCATATGGAGTCCATCTCGAGCCTTACTATCACGGAGAGTAGTAAGTGCATCATGATAGTGACAGAGAAGGTGTCGCTCATGAGAAACTT
CATCAAGATGTCTGATCCAATGAAGGCTGCTTACTGTAAGGTCCTCTTCTGCGGTGACCCTTAA
Protein sequenceShow/hide protein sequence
MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYCKVLFCGDP