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IVF0014409 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014409
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPol protein
Genome locationchr04:21552249..21552428
RNA-Seq ExpressionIVF0014409
SyntenyIVF0014409
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033260.1 gag/pol protein [Cucumis melo var. makuwa]7.01e-0656.14Show/hide
Query:  MRLRAVGSADT---VGRRTHGG-------------DWLRETERKIENGATATVVRWR
        MR RA G   T    GR T  G             DWLRETERKIENGATATVVRWR
Subjt:  MRLRAVGSADT---VGRRTHGG-------------DWLRETERKIENGATATVVRWR
KAA0033818.1 hypothetical protein E6C27_scaffold1735G00130 [Cucumis melo var. makuwa]1.33e-0463.89Show/hide
Query:  MRLRAV----GSADTVGRRTHGGDWLRETERKIENG
        +R  AV     SADT+GRRTH G WLRETER+I NG
Subjt:  MRLRAV----GSADTVGRRTHGGDWLRETERKIENG
KAA0039625.1 pol protein [Cucumis melo var. makuwa]2.72e-0970.45Show/hide
Query:  SADTVGRRTHGGDWLRETERKIENGATATVVR-WRCETDDDGDG
        SADTVGRRTHG   LRETER+ ENG TA   + W CET DDGDG
Subjt:  SADTVGRRTHGGDWLRETERKIENGATATVVR-WRCETDDDGDG
TrEMBL top hitse value%identityAlignment
A0A5A7TDW4 Pol protein4.3e-0772.73Show/hide
Query:  SADTVGRRTHGGDWLRETERKIENGATA-TVVRWRCETDDDGDG
        SADTVGRRTHG   LRETER+ ENG TA T   W CET DDGDG
Subjt:  SADTVGRRTHGGDWLRETERKIENGATA-TVVRWRCETDDDGDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACTGAGGGCGGTTGGGTCGGCAGACACGGTCGGACGAAGGACACACGGTGGCGACTGGTTGCGTGAGACCGAGAGGAAGATCGAAAATGGGGCGACCGCGACGGT
TGTACGCTGGCGTTGTGAAACTGACGACGACGGAGATGGACGAGTTTGCGAGCGGAAGAGAAATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGACTGAGGGCGGTTGGGTCGGCAGACACGGTCGGACGAAGGACACACGGTGGCGACTGGTTGCGTGAGACCGAGAGGAAGATCGAAAATGGGGCGACCGCGACGGT
TGTACGCTGGCGTTGTGAAACTGACGACGACGGAGATGGACGAGTTTGCGAGCGGAAGAGAAATGGATGA
Protein sequenceShow/hide protein sequence
MRLRAVGSADTVGRRTHGGDWLRETERKIENGATATVVRWRCETDDDGDGRVCERKRNG