; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0014433 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014433
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionphotosynthetic NDH subunit of subcomplex B 4, chloroplastic
Genome locationchr02:21585695..21587050
RNA-Seq ExpressionIVF0014433
SyntenyIVF0014433
Gene Ontology termsGO:0009773 - photosynthetic electron transport in photosystem I (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR034570 - Photosynthetic NDH subunit of subcomplex B 4, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138173.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Cucumis sativus]1.09e-12398.31Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL
        MAK IAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKV KPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSD AIKNVYSL
Subjt:  MAKTIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL

Query:  YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
        YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
Subjt:  YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK

XP_008453213.1 PREDICTED: photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Cucumis melo]3.26e-12599.44Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL
        MAK IAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL
Subjt:  MAKTIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL

Query:  YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
        YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
Subjt:  YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK

XP_022987205.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like [Cucurbita maxima]1.64e-10787.64Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLHP-KSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS
        MAK IAGFS+I PTLHSSNLHP K+ LIP  KL SNSG F HQ+L +  K +RGS+ KV+AFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS
Subjt:  MAKTIAGFSIIKPTLHSSNLHP-KSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS

Query:  LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
        LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAG+K
Subjt:  LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK

XP_023516363.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like [Cucurbita pepo subsp. pepo]3.46e-10988.76Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLHP-KSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS
        MAK IAGFS+I PTLHSSNLHP KS LIPH KL SNSG F HQ+L +  K +RGS+ KV+AFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS
Subjt:  MAKTIAGFSIIKPTLHSSNLHP-KSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS

Query:  LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
        LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAG+K
Subjt:  LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK

XP_038880039.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Benincasa hispida]1.08e-11291.01Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLHP-KSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS
        MAK IAGFSIIKPTLHSSNLH  KS LIP SKLLSNS  F+HQE P+V KP+RGSL K+NAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS
Subjt:  MAKTIAGFSIIKPTLHSSNLHP-KSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS

Query:  LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
        LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQ+VGGL+ELEEAGKK
Subjt:  LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK

TrEMBL top hitse value%identityAlignment
A0A0A0LRP8 Uncharacterized protein9.7e-9598.31Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL
        MAK IAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKV KPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSD AIKNVYSL
Subjt:  MAKTIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL

Query:  YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
        YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
Subjt:  YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK

A0A1S3BVN6 photosynthetic NDH subunit of subcomplex B 4, chloroplastic6.7e-9699.44Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL
        MAK IAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL
Subjt:  MAKTIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL

Query:  YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
        YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
Subjt:  YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK

A0A5A7UWT7 Photosynthetic NDH subunit of subcomplex B 46.7e-9699.44Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL
        MAK IAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL
Subjt:  MAKTIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSL

Query:  YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
        YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
Subjt:  YIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK

A0A6J1E2I6 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like4.2e-8287.08Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLHP-KSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS
        MAK IAGFS++ PTLHSSNLHP KS LIP  KL SNSG F HQ+L +  K +RGS+ KV+AFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS
Subjt:  MAKTIAGFSIIKPTLHSSNLHP-KSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS

Query:  LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
        LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEE ARADLWREELIEEIEQKVGGLRELEEAG+K
Subjt:  LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK

A0A6J1JG67 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like1.9e-8287.64Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLHP-KSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS
        MAK IAGFS+I PTLHSSNLHP K+ LIP  KL SNSG F HQ+L +  K +RGS+ KV+AFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS
Subjt:  MAKTIAGFSIIKPTLHSSNLHP-KSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYS

Query:  LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
        LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAG+K
Subjt:  LYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK

SwissProt top hitse value%identityAlignment
Q8RXS1 Photosynthetic NDH subunit of subcomplex B 4, chloroplastic2.5e-4773.23Show/hide
Query:  RGSLSKVNAFP-DWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA
        RGSL    A P D  LMAV+V  ++G RD++T K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE QEDIEE ARA
Subjt:  RGSLSKVNAFP-DWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA

Query:  DLWREELIEEIEQKVGGLRELEEAGKK
        +LWREELIEEIEQKVGGLRELEEA  K
Subjt:  DLWREELIEEIEQKVGGLRELEEAGKK

Arabidopsis top hitse value%identityAlignment
AT1G18730.1 NDH dependent flow 61.8e-4873.23Show/hide
Query:  RGSLSKVNAFP-DWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA
        RGSL    A P D  LMAV+V  ++G RD++T K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE QEDIEE ARA
Subjt:  RGSLSKVNAFP-DWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA

Query:  DLWREELIEEIEQKVGGLRELEEAGKK
        +LWREELIEEIEQKVGGLRELEEA  K
Subjt:  DLWREELIEEIEQKVGGLRELEEAGKK

AT1G18730.2 NDH dependent flow 61.1e-3152.11Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLH-PKSALIP-HSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFP-DWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNV
        MA+    F+     + SS  H PK    P H   LSN      + L       RGSL    A P D  LMAV+V  ++G RD++T K + HLSD+AIKNV
Subjt:  MAKTIAGFSIIKPTLHSSNLH-PKSALIP-HSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFP-DWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNV

Query:  YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE
        Y  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE
Subjt:  YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE

AT1G18730.3 NDH dependent flow 67.9e-4959.44Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLH-PKSALIP-HSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFP-DWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNV
        MA+    F+     + SS  H PK    P H   LSN      + L       RGSL    A P D  LMAV+V  ++G RD++T K + HLSD+AIKNV
Subjt:  MAKTIAGFSIIKPTLHSSNLH-PKSALIP-HSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFP-DWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNV

Query:  YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK
        Y  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE QEDIEE ARA+LWREELIEEIEQKVGGLRELEEA  K
Subjt:  YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK

AT1G18730.4 NDH dependent flow 61.1e-3152.11Show/hide
Query:  MAKTIAGFSIIKPTLHSSNLH-PKSALIP-HSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFP-DWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNV
        MA+    F+     + SS  H PK    P H   LSN      + L       RGSL    A P D  LMAV+V  ++G RD++T K + HLSD+AIKNV
Subjt:  MAKTIAGFSIIKPTLHSSNLH-PKSALIP-HSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFP-DWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNV

Query:  YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE
        Y  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE
Subjt:  YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGACTATTGCAGGCTTCAGCATTATCAAACCAACTCTGCATAGCTCAAATCTCCACCCTAAATCAGCTCTCATCCCACATTCAAAACTGCTTTCAAACTCTGG
AGGTTTCAGTCATCAAGAACTGCCTAAAGTTGCAAAGCCAAAAAGGGGATCTCTAAGCAAAGTGAATGCCTTCCCCGATTGGCAATTGATGGCAGTTCTAGTTGATCATT
TGGATGGCCAAAGAGACCTTGTTACCCACAAATCCATAGTGCATCTTAGTGATGAAGCTATAAAGAATGTCTACAGTCTTTACATCATGTTCACATGTTGGGGTTGTTTG
TTCTTTGGCTCCATGAAGGATCCATATTATGACTCAGAGGTGTACAGGAAAGATGGAGGAGATGGAACAGGACATTGGGTCTATGAAAAGCAAGAAGACATTGAAGAAGC
AGCAAGAGCAGACCTATGGAGGGAGGAGCTGATAGAGGAGATTGAACAAAAGGTTGGAGGACTTAGAGAGTTGGAAGAAGCTGGAAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
GGAAATGGTTCCCTTATCCTTTCTTTCTTCTTCATGCTCAATAAGATTCCAAAACCAACCCCAGGTAATAGTTATCTGTTTCTATCTTTTCTTCTACAACAATGGCTAAG
ACTATTGCAGGCTTCAGCATTATCAAACCAACTCTGCATAGCTCAAATCTCCACCCTAAATCAGCTCTCATCCCACATTCAAAACTGCTTTCAAACTCTGGAGGTTTCAG
TCATCAAGAACTGCCTAAAGTTGCAAAGCCAAAAAGGGGATCTCTAAGCAAAGTGAATGCCTTCCCCGATTGGCAATTGATGGCAGTTCTAGTTGATCATTTGGATGGCC
AAAGAGACCTTGTTACCCACAAATCCATAGTGCATCTTAGTGATGAAGCTATAAAGAATGTCTACAGTCTTTACATCATGTTCACATGTTGGGGTTGTTTGTTCTTTGGC
TCCATGAAGGATCCATATTATGACTCAGAGGTGTACAGGAAAGATGGAGGAGATGGAACAGGACATTGGGTCTATGAAAAGCAAGAAGACATTGAAGAAGCAGCAAGAGC
AGACCTATGGAGGGAGGAGCTGATAGAGGAGATTGAACAAAAGGTTGGAGGACTTAGAGAGTTGGAAGAAGCTGGAAAGAAATAAGAGGTTTTTGGGAATCATCCATTTA
CGTTCTTAATTTATTACAACATAAATCATTCTGTGTATATAATATTGAAACACTTGGGATTCTATAGCTGATGGGAATGTGACAGTTGTAGTAAAACAGCAGAAACAATC
CAGAAAAACACAAGAAAATATCAGTTCTTGTGAAGAATTTGCCTCAGAGGTAGTGAAAATCTTGTATTATCATCATTTTTTGGTTAAAATTCTCAAGTTTTTGGTTCATA
AAAAAGAATGGAAAGTTGGGTTAAGTGAGC
Protein sequenceShow/hide protein sequence
MAKTIAGFSIIKPTLHSSNLHPKSALIPHSKLLSNSGGFSHQELPKVAKPKRGSLSKVNAFPDWQLMAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCL
FFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQKVGGLRELEEAGKK