; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0014459 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014459
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr05:1759618..1760626
RNA-Seq ExpressionIVF0014459
SyntenyIVF0014459
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061726.1 putative CCR4-associated factor 1-like protein 11 [Cucumis melo var. makuwa]2.70e-197100Show/hide
Query:  MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF
        MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF
Subjt:  MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF

Query:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR
        DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR
Subjt:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR

Query:  FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
Subjt:  FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

XP_004140166.1 probable CCR4-associated factor 1 homolog 9 [Cucumis sativus]3.92e-18193.21Show/hide
Query:  MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF
        MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPL PSDHYLLLKSNVDALNLIQLGLTLSDA GNLPTLGTKNSFIWEFNFRDF
Subjt:  MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF

Query:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR
        DVAR PH P SIELLKQQGIDFHRNRTHGVCSS+FADL+MSSGLLCN+SLTWVTFHSAYDFGYLVKILTRTKLPSRL DFLNIL  LFG KVYDVKHMMR
Subjt:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR

Query:  FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        FCDGLYGGLDR+AKTLDL+RAVGKSHQAGSDSLLT+QAFKKM DVYFSKDGP+KHAGVLFGLE+Y
Subjt:  FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

XP_008449941.1 PREDICTED: probable CCR4-associated factor 1 homolog 11, partial [Cucumis melo]2.52e-194100Show/hide
Query:  RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARH
        RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARH
Subjt:  RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARH

Query:  PHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFCDGL
        PHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFCDGL
Subjt:  PHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFCDGL

Query:  YGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        YGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
Subjt:  YGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

XP_022957732.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]2.70e-14877.95Show/hide
Query:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV
        I  R+VWD NL HEF LI +L+ RYPFIS+DTEFPGV++RP  H  P  PSDHYLLLKSNVDALNLIQ+GLTLSDADGNLPTLGT   FIWEFNFRDFDV
Subjt:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV

Query:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC
         R  H P SI+LLK+QGIDF RNR HGV S++F++LLMSSGLLCN S++WVTFHSAYDFGYLVKILTR KLPSRL +FL IL   FGNKVYDVKHMMRFC
Subjt:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        D LYGGL+RVAKTL ++RAVGK HQAGSDSLLTW AF+KMRDVYF KDGPEKHAGVL+GLE+Y
Subjt:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

XP_038901771.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]8.88e-16284.15Show/hide
Query:  MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF
        M IQ RQVWD NL +EFNLI  L HR+PFIS+DTEFPGV+IRP LHR  L PSDHYLLLKSNVDALNLIQ+GLTLSDADGNLPTLGT N FIWEFNFRDF
Subjt:  MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF

Query:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR
        DV R  H P SIELLK+QGIDF RNR HGV SS+FA+LLMSSGLLCN+S+TWVTFHSAYDFGYLVKILTRTKLP+RLHDFL IL  LFGNKVYDVKHMMR
Subjt:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR

Query:  FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        FCDGLYGGLDRVAKTL ++RAVGKSHQAGSDSLLTWQAF+KMRDVYF KDGPEKHAGVL+GLE+Y
Subjt:  FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

TrEMBL top hitse value%identityAlignment
A0A0A0KI60 Poly(A)-specific ribonuclease5.4e-14293.21Show/hide
Query:  MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF
        MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPL PSDHYLLLKSNVDALNLIQLGLTLSDA GNLPTLGTKNSFIWEFNFRDF
Subjt:  MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF

Query:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR
        DVAR PH P SIELLKQQGIDFHRNRTHGVCSS+FADL+MSSGLLCN+SLTWVTFHSAYDFGYLVKILTRTKLPSRL DFLNIL  LFG KVYDVKHMMR
Subjt:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR

Query:  FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        FCDGLYGGLDR+AKTLDL+RAVGKSHQAGSDSLLT+QAFKKM DVYFSKDGP+KHAGVLFGLE+Y
Subjt:  FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

A0A1S3BNU2 Poly(A)-specific ribonuclease9.9e-152100Show/hide
Query:  RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARH
        RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARH
Subjt:  RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARH

Query:  PHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFCDGL
        PHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFCDGL
Subjt:  PHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFCDGL

Query:  YGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        YGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
Subjt:  YGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

A0A5D3B887 Poly(A)-specific ribonuclease2.8e-154100Show/hide
Query:  MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF
        MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF
Subjt:  MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDF

Query:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR
        DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR
Subjt:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR

Query:  FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
Subjt:  FCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

A0A6J1GZY2 Poly(A)-specific ribonuclease6.0e-11777.95Show/hide
Query:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV
        I  R+VWD NL HEF LI +L+ RYPFIS+DTEFPGV++RP    HP  PSDHYLLLKSNVDALNLIQ+GLTLSDADGNLPTLGT   FIWEFNFRDFDV
Subjt:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV

Query:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC
         R  H P SI+LLK+QGIDF RNR HGV S++F++LLMSSGLLCN S++WVTFHSAYDFGYLVKILTR KLPSRL +FL IL   FGNKVYDVKHMMRFC
Subjt:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        D LYGGL+RVAKTL ++RAVGK HQAGSDSLLTW AF+KMRDVYF KDGPEKHAGVL+GLE+Y
Subjt:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

A0A6J1K4S7 Poly(A)-specific ribonuclease7.9e-11777.95Show/hide
Query:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV
        I  R+VWD NL HEF LI  L+ RYPFIS+DTEFPGV++RP    HP  PSDHYLLLKSNVDALNLIQ+GLTLSDADGNLPTLGT   FIWEFNFRDFDV
Subjt:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV

Query:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC
         R  H P SI+LLK+QGIDF RNR HGV S++F++LLMSSGLLCN S++WVTFHSAYDFGYLVKILTR KLPSRL +FL IL   FGNKVYDVKHMMRFC
Subjt:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        D LYGGL+RVAKTL ++RAVGK HQAGSDSLLTW AF+KMRDVYF KDGPEKHAGVL+GLE+Y
Subjt:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 111.5e-9665.3Show/hide
Query:  LIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLH-RHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNS--FIWEFNFR
        +I  R VW  NL  EF+LI  ++  YPFIS+DTEFPGV+ +  L      +P+  Y LLKSNVDAL+LIQ+GLTLSDADGNLP LG + +  +IWEFNFR
Subjt:  LIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLH-RHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNS--FIWEFNFR

Query:  DFDVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHM
        DFDV R PH P SIELL++ GIDF RNR  GV S +FA+L+MSSGL+CN S++WVTFHSAYDFGYLVKILTR +LP  L +FL +L   FG++VYDVKH+
Subjt:  DFDVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHM

Query:  MRFCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        MRFC+  LYGGLDRVA++L++ RAVGK HQAGSDSLLTWQAF++MRD+YF +DG EKHAGVL+GLE++
Subjt:  MRFCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

Q9LEU4 Probable CCR4-associated factor 1 homolog 101.3e-6849.24Show/hide
Query:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV
        I  R+VWD NL+ EF LI +++ ++ +I++DTEFPGV+++P +     +   +Y  LK NVD L LIQ+GLT SD +GNLPT GT    IW+FNFR+F++
Subjt:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV

Query:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC
            +   SIELL+Q GIDF +N   G+   +F +L+MSSG++ N++++WVTFH  YDFGYLVK+LT  +LP +  DF  +L   F   VYD+KH+M FC
Subjt:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEI
        +GL+GGL+R+A+ + +ER VG  HQAGSDSLLT  +F+K+++ YF     EK+ GVL+GL +
Subjt:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEI

Q9LXM2 Probable CCR4-associated factor 1 homolog 92.5e-9664.29Show/hide
Query:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLG--TKNSFIWEFNFRDF
        + TR+VW  NL  EF LI++++  YPFIS+DTEFPGV+ +  L     +P D Y LLK+NVDAL+LIQ+GLTLSD +GNLP LG      FIWEFNFRDF
Subjt:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLG--TKNSFIWEFNFRDF

Query:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR
        DVAR  H P SIELL++QGIDF RN   GV S +FA+L+MSSGL+CN  ++WVTFHSAYDFGYL+KILTR +LP  L +F  ++  LFG +VYDVKHMM+
Subjt:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR

Query:  FCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        FC+  L+GGLDRVA+TL++ RAVGK HQAGSDSLLTW AF++MRD+YF +DGPEKHAGVL+GLE++
Subjt:  FCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

Q9SAI2 Probable CCR4-associated factor 1 homolog 69.4e-6749.05Show/hide
Query:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV
        IQ R+VW+ NL  E +LI  ++  +P++++DTEFPG+++RP +     +   HY  LK+NV+ L +IQLGLT S+  GNLPT GT    IW+FNFR+FD+
Subjt:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV

Query:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC
                SIELLKQ GID  +N   G+ S +FA+LLMSSG++ N ++ WVTFHS YDFGYL+K+LT   LP    DF  ++   F   VYD+KH+M+FC
Subjt:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGP-EKHAGVLFGLEI
        + L+GGL+++A+ L++ER VG  HQAGSDSLLT   F+K+++ +F   GP  K++GVL+GL +
Subjt:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGP-EKHAGVLFGLEI

Q9SKZ2 Probable CCR4-associated factor 1 homolog 76.5e-6849.81Show/hide
Query:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSF-IWEFNFRDFD
        IQ R+VW+ NL  E  LI +++  +PF+++DTEFPG++ RP +     +   HY  LK+NV+ L +IQLGLT SD  GNLPT GT N + IW+FNFR+FD
Subjt:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSF-IWEFNFRDFD

Query:  VARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRF
        +    +   SIELL+Q GIDF +N   G+ S +FA+LLMSSG++ N ++ WVTFHS YDFGYL+K+LT   LP     F  ++   F  +VYD+KH+M+F
Subjt:  VARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRF

Query:  CDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEI
        C+ L+GGL+++A+ LD+ER VG  HQAGSDSLLT   F+K+++ +F     EK++GVL+GL +
Subjt:  CDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEI

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.7e-6849.05Show/hide
Query:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV
        IQ R+VW+ NL  E +LI  ++  +P++++DTEFPG+++RP +     +   HY  LK+NV+ L +IQLGLT S+  GNLPT GT    IW+FNFR+FD+
Subjt:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV

Query:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC
                SIELLKQ GID  +N   G+ S +FA+LLMSSG++ N ++ WVTFHS YDFGYL+K+LT   LP    DF  ++   F   VYD+KH+M+FC
Subjt:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGP-EKHAGVLFGLEI
        + L+GGL+++A+ L++ER VG  HQAGSDSLLT   F+K+++ +F   GP  K++GVL+GL +
Subjt:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGP-EKHAGVLFGLEI

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.6e-6949.81Show/hide
Query:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSF-IWEFNFRDFD
        IQ R+VW+ NL  E  LI +++  +PF+++DTEFPG++ RP +     +   HY  LK+NV+ L +IQLGLT SD  GNLPT GT N + IW+FNFR+FD
Subjt:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSF-IWEFNFRDFD

Query:  VARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRF
        +    +   SIELL+Q GIDF +N   G+ S +FA+LLMSSG++ N ++ WVTFHS YDFGYL+K+LT   LP     F  ++   F  +VYD+KH+M+F
Subjt:  VARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRF

Query:  CDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEI
        C+ L+GGL+++A+ LD+ER VG  HQAGSDSLLT   F+K+++ +F     EK++GVL+GL +
Subjt:  CDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEI

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-9764.29Show/hide
Query:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLG--TKNSFIWEFNFRDF
        + TR+VW  NL  EF LI++++  YPFIS+DTEFPGV+ +  L     +P D Y LLK+NVDAL+LIQ+GLTLSD +GNLP LG      FIWEFNFRDF
Subjt:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLG--TKNSFIWEFNFRDF

Query:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR
        DVAR  H P SIELL++QGIDF RN   GV S +FA+L+MSSGL+CN  ++WVTFHSAYDFGYL+KILTR +LP  L +F  ++  LFG +VYDVKHMM+
Subjt:  DVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMR

Query:  FCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        FC+  L+GGLDRVA+TL++ RAVGK HQAGSDSLLTW AF++MRD+YF +DGPEKHAGVL+GLE++
Subjt:  FCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.3e-7049.24Show/hide
Query:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV
        I  R+VWD NL+ EF LI +++ ++ +I++DTEFPGV+++P +     +   +Y  LK NVD L LIQ+GLT SD +GNLPT GT    IW+FNFR+F++
Subjt:  IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDV

Query:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC
            +   SIELL+Q GIDF +N   G+   +F +L+MSSG++ N++++WVTFH  YDFGYLVK+LT  +LP +  DF  +L   F   VYD+KH+M FC
Subjt:  ARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFC

Query:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEI
        +GL+GGL+R+A+ + +ER VG  HQAGSDSLLT  +F+K+++ YF     EK+ GVL+GL +
Subjt:  DGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEI

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-9765.3Show/hide
Query:  LIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLH-RHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNS--FIWEFNFR
        +I  R VW  NL  EF+LI  ++  YPFIS+DTEFPGV+ +  L      +P+  Y LLKSNVDAL+LIQ+GLTLSDADGNLP LG + +  +IWEFNFR
Subjt:  LIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLH-RHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNS--FIWEFNFR

Query:  DFDVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHM
        DFDV R PH P SIELL++ GIDF RNR  GV S +FA+L+MSSGL+CN S++WVTFHSAYDFGYLVKILTR +LP  L +FL +L   FG++VYDVKH+
Subjt:  DFDVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHM

Query:  MRFCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY
        MRFC+  LYGGLDRVA++L++ RAVGK HQAGSDSLLTWQAF++MRD+YF +DG EKHAGVL+GLE++
Subjt:  MRFCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATCCAAACCCGTCAGGTCTGGGATCTCAATCTCCTTCATGAATTCAATCTCATCACTCAACTCCTCCATCGCTACCCTTTCATCTCCATCGACACTGAATTCCC
CGGCGTCCTCATCCGCCCCACCCTCCACCGCCACCCTCTCCACCCTTCCGATCACTACCTCCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAACTCGGTCTCA
CTCTCTCCGACGCCGACGGCAACCTCCCCACACTTGGCACCAAAAACTCCTTCATCTGGGAGTTCAATTTTAGAGATTTCGACGTTGCACGCCACCCCCACAACCCGGCT
TCCATCGAGCTCTTAAAACAACAAGGGATCGATTTCCACCGCAACAGAACTCATGGGGTTTGCTCCTCCCAGTTCGCCGACTTGCTGATGTCATCCGGTCTTTTATGTAA
CAACTCCCTTACTTGGGTTACCTTTCACAGCGCCTACGACTTTGGTTACTTGGTTAAGATTCTCACTCGGACCAAACTCCCCTCACGGCTACACGATTTCTTGAACATTC
TGGGGAAGTTGTTCGGGAATAAAGTTTACGACGTGAAGCACATGATGCGGTTCTGCGATGGGCTATACGGGGGTTTGGATCGGGTTGCTAAGACGCTTGATTTGGAGCGG
GCGGTTGGGAAATCCCATCAGGCCGGTTCCGATTCCCTCCTCACATGGCAAGCTTTTAAGAAGATGAGGGATGTTTATTTCTCAAAGGATGGCCCGGAGAAGCACGCCGG
CGTCTTGTTTGGTTTAGAAATTTATTAA
mRNA sequenceShow/hide mRNA sequence
GCAAATGGAAAGACGGCAAAGGCTAAATTGAGAAGCATCTACGTCCATTCCTTTCAATTTTGAACATTCAAACACCTTCATCCCACAGTTTCCATTTCCACTCAAGAATC
AAATTAAACCCTTTTCAATTCCTTTCTTTCTCATCTTTATAAACACAGCACAATCCTCAATTCCCCCAAATTATAATAACTAATTTCCCACTTCTCAAACTATGTTAATC
CAAACCCGTCAGGTCTGGGATCTCAATCTCCTTCATGAATTCAATCTCATCACTCAACTCCTCCATCGCTACCCTTTCATCTCCATCGACACTGAATTCCCCGGCGTCCT
CATCCGCCCCACCCTCCACCGCCACCCTCTCCACCCTTCCGATCACTACCTCCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAACTCGGTCTCACTCTCTCCG
ACGCCGACGGCAACCTCCCCACACTTGGCACCAAAAACTCCTTCATCTGGGAGTTCAATTTTAGAGATTTCGACGTTGCACGCCACCCCCACAACCCGGCTTCCATCGAG
CTCTTAAAACAACAAGGGATCGATTTCCACCGCAACAGAACTCATGGGGTTTGCTCCTCCCAGTTCGCCGACTTGCTGATGTCATCCGGTCTTTTATGTAACAACTCCCT
TACTTGGGTTACCTTTCACAGCGCCTACGACTTTGGTTACTTGGTTAAGATTCTCACTCGGACCAAACTCCCCTCACGGCTACACGATTTCTTGAACATTCTGGGGAAGT
TGTTCGGGAATAAAGTTTACGACGTGAAGCACATGATGCGGTTCTGCGATGGGCTATACGGGGGTTTGGATCGGGTTGCTAAGACGCTTGATTTGGAGCGGGCGGTTGGG
AAATCCCATCAGGCCGGTTCCGATTCCCTCCTCACATGGCAAGCTTTTAAGAAGATGAGGGATGTTTATTTCTCAAAGGATGGCCCGGAGAAGCACGCCGGCGTCTTGTT
TGGTTTAGAAATTTATTAA
Protein sequenceShow/hide protein sequence
MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPA
SIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLER
AVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY