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IVF0014521 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014521
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr03:9040875..9041195
RNA-Seq ExpressionIVF0014521
SyntenyIVF0014521
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]5.23e-4172.64Show/hide
Query:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKE
        +S EKKFE LDLQ K EKKTKPSIEEPPELELK LPNHLKY YL ENDTLPV+I  +LD   EK LL +LKR KKE  WTL DIQGISSSY +HK++L+E
Subjt:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKE

Query:  GQTSTI
        GQ  TI
Subjt:  GQTSTI

KAA0059789.1 uncharacterized protein E6C27_scaffold108G00540 [Cucumis melo var. makuwa]1.98e-67100Show/hide
Query:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKE
        MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKE
Subjt:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKE

Query:  GQTSTI
        GQTSTI
Subjt:  GQTSTI

TYJ96947.1 integrase [Cucumis melo var. makuwa]1.77e-3074.44Show/hide
Query:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSS
        +SGEKKFE LDLQTK EKKTK SIEEPPELELKP  NHLKYAYLG NDTL + I  +LDAT+EK LL ILK  KK   WTL DIQGIS S
Subjt:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSS

WP_217833196.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.68e-2961Show/hide
Query:  FEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKEGQTSTI
        FE LDL  +  +KTKPS+EEPP LELK LP HLKYAYLGE  TLPV I A L    EKALL ILK   K   WTL DI+GIS SY +HKI+L+EG+  ++
Subjt:  FEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKEGQTSTI

XP_038874990.1 uncharacterized protein LOC120067513 [Benincasa hispida]1.37e-2757.84Show/hide
Query:  KKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKEGQTS
        K+ EP  L  +R K T+PS+EEPPELELK LP HLKYA+LG N+TLPV I ANL   +E++LL +LK+ K    WTL +I GISSSY +HKI+L+EG++ 
Subjt:  KKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKEGQTS

Query:  TI
        +I
Subjt:  TI

TrEMBL top hitse value%identityAlignment
A0A5A7UF79 Uncharacterized protein2.8e-3372.64Show/hide
Query:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKE
        +S EKKFE LDLQ K EKKTKPSIEEPPELELK LPNHLKY YL ENDTLPV+I  +LD   EK LL +LKR KKE  WTL DIQGISSSY +HK++L+E
Subjt:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKE

Query:  GQTSTI
        GQ  TI
Subjt:  GQTSTI

A0A5D3BCU9 Integrase1.3e-2574.44Show/hide
Query:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSS
        +SGEKKFE LDLQTK EKKTK SIEEPPELELKP  NHLKYAYLG NDTL + I  +LDAT+EK LL ILK  KK   WTL DIQGIS S
Subjt:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSS

A0A5D3BDT2 RT_RNaseH domain-containing protein2.0e-2362.11Show/hide
Query:  LQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKEGQTSTI
        L  + EK TKPS+ EP ELELKPLPNHLKY YLGENDTLP  I  +L+A +E+ALL  LK+ KKE  WTL DI+G S S Y+HKIKL+EG+ + +
Subjt:  LQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKEGQTSTI

A0A5D3BM57 Uncharacterized protein3.0e-51100Show/hide
Query:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKE
        MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKE
Subjt:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKE

Query:  GQTSTI
        GQTSTI
Subjt:  GQTSTI

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein2.2e-2271.43Show/hide
Query:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDI
        +SG+ KFE LDLQTK E KT+ SIEEPP+LELKPLPNHLKYAYL ENDTLPV+I A+LD T+EKALL +LKR KKE   TL ++
Subjt:  MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGCGAAAAGAAGTTTGAACCTTTGGATCTGCAAACAAAAAGAGAGAAAAAGACAAAGCCATCAATTGAAGAACCACCAGAACTAGAGCTCAAGCCTTTGCCCAA
CCATCTGAAGTATGCATACTTGGGAGAGAATGACACTCTGCCCGTTACCATCTTTGCCAACTTGGATGCCACAGACGAGAAGGCTTTATTAATTATACTGAAACGCCAAA
AGAAGGAAACAAGGTGGACTCTAACAGACATCCAAGGCATAAGTTCATCCTATTACATCCATAAAATCAAGTTAAAAGAGGGTCAAACGAGCACCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGCGAAAAGAAGTTTGAACCTTTGGATCTGCAAACAAAAAGAGAGAAAAAGACAAAGCCATCAATTGAAGAACCACCAGAACTAGAGCTCAAGCCTTTGCCCAA
CCATCTGAAGTATGCATACTTGGGAGAGAATGACACTCTGCCCGTTACCATCTTTGCCAACTTGGATGCCACAGACGAGAAGGCTTTATTAATTATACTGAAACGCCAAA
AGAAGGAAACAAGGTGGACTCTAACAGACATCCAAGGCATAAGTTCATCCTATTACATCCATAAAATCAAGTTAAAAGAGGGTCAAACGAGCACCATTTAA
Protein sequenceShow/hide protein sequence
MSGEKKFEPLDLQTKREKKTKPSIEEPPELELKPLPNHLKYAYLGENDTLPVTIFANLDATDEKALLIILKRQKKETRWTLTDIQGISSSYYIHKIKLKEGQTSTI