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IVF0014545 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014545
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCell wall protein RBR3-like
Genome locationchr03:14730835..14731583
RNA-Seq ExpressionIVF0014545
SyntenyIVF0014545
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036900.1 Copia protein [Cucumis melo var. makuwa]3.68e-0655Show/hide
Query:  DTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQLTKGQKVVT
        DT  +PR+K+PPP S F+ S+  ADT A T     S DA    V RMP RQ TKGQKVVT
Subjt:  DTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQLTKGQKVVT

KAA0046488.1 uncharacterized protein E6C27_scaffold543G00710 [Cucumis melo var. makuwa]4.99e-0949.43Show/hide
Query:  MSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSR--PPSSDASGSFVL---RMPHRQLTKGQKV
        MS  DIPSPI  T N GV V DN DT      +VP  DSAF+ S S  D   PT  +  PPSSD SG+  L   +MP   LTK QK+
Subjt:  MSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSR--PPSSDASGSFVL---RMPHRQLTKGQKV

KAA0047180.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]2.49e-7867.96Show/hide
Query:  MDSHHPMLAHLFVAASVSTFSLFRKYIGFWKSLDHLEFSQINIHSSRLLLRRCRLIVIQIPLMEKTMWFCQSCLVTCTVQSQPKVDRFHLSNHQTPTPST
        MDSHHPMLAHLFVAASVSTFSLFRKYIGFWKSLDHLEFSQINIHSS                               +   +  V    L +H       
Subjt:  MDSHHPMLAHLFVAASVSTFSLFRKYIGFWKSLDHLEFSQINIHSSRLLLRRCRLIVIQIPLMEKTMWFCQSCLVTCTVQSQPKVDRFHLSNHQTPTPST

Query:  IHVAKTPSNIDVDILDVDVQDESPMSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQL
        +H AK   N       VDVQDESPMSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQL
Subjt:  IHVAKTPSNIDVDILDVDVQDESPMSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQL

Query:  TKGQKV
        TK   V
Subjt:  TKGQKV

TYJ97724.1 uncharacterized protein E5676_scaffold1251G00220 [Cucumis melo var. makuwa]6.91e-0949.43Show/hide
Query:  MSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSR--PPSSDASGSFVL---RMPHRQLTKGQKV
        MS  DIPSPI  T N GV V DN DT      +VP  DSAF+ S S  D   PT  +  PPSSD SG+  L   +MP   LTK QK+
Subjt:  MSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSR--PPSSDASGSFVL---RMPHRQLTKGQKV

TYK27337.1 Copia protein [Cucumis melo var. makuwa]3.68e-0655Show/hide
Query:  DTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQLTKGQKVVT
        DT  +PR+K+PPP S F+ S+  ADT A T     S DA    V RMP RQ TKGQKVVT
Subjt:  DTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQLTKGQKVVT

TrEMBL top hitse value%identityAlignment
A0A5A7T0L4 Copia protein3.8e-0555Show/hide
Query:  DTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQLTKGQKVVT
        DT  +PR+K+PPP S F+ S+  ADT A T     S DA    V RMP RQ TKGQKVVT
Subjt:  DTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQLTKGQKVVT

A0A5A7TUG5 Uncharacterized protein6.9e-0749.43Show/hide
Query:  MSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSR--PPSSDASGSFVL---RMPHRQLTKGQKV
        MS  DIPSPI  T N GV V DN DT      +VP  DSAF+ S S  D   PT  +  PPSSD SG+  L   +MP   LTK QK+
Subjt:  MSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSR--PPSSDASGSFVL---RMPHRQLTKGQKV

A0A5D3BF79 Uncharacterized protein9.0e-0749.43Show/hide
Query:  MSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSR--PPSSDASGSFVL---RMPHRQLTKGQKV
        MS  DIPSPI  T N GV V DN DT      +VP  DSAF+ S S  D   PT  +  PPSSD SG+  L   +MP   LTK QK+
Subjt:  MSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSR--PPSSDASGSFVL---RMPHRQLTKGQKV

A0A5D3DU85 Copia protein3.8e-0555Show/hide
Query:  DTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQLTKGQKVVT
        DT  +PR+K+PPP S F+ S+  ADT A T     S DA    V RMP RQ TKGQKVVT
Subjt:  DTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQLTKGQKVVT

A0A5D3E1T9 Cell wall protein RBR3-like6.3e-6167.96Show/hide
Query:  MDSHHPMLAHLFVAASVSTFSLFRKYIGFWKSLDHLEFSQINIHSSRLLLRRCRLIVIQIPLMEKTMWFCQSCLVTCTVQSQPKVDRFHLSNHQTPTPST
        MDSHHPMLAHLFVAASVSTFSLFRKYIGFWKSLDHLEFSQINIHSS                               +   +  V    L +H       
Subjt:  MDSHHPMLAHLFVAASVSTFSLFRKYIGFWKSLDHLEFSQINIHSSRLLLRRCRLIVIQIPLMEKTMWFCQSCLVTCTVQSQPKVDRFHLSNHQTPTPST

Query:  IHVAKTPSNIDVDILDVDVQDESPMSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQL
        +H AK   N       VDVQDESPMSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQL
Subjt:  IHVAKTPSNIDVDILDVDVQDESPMSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQL

Query:  TKGQKV
        TK   V
Subjt:  TKGQKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCCATCATCCAATGTTGGCTCATCTGTTCGTGGCCGCATCTGTATCGACATTTTCGTTGTTTAGGAAGTACATTGGCTTCTGGAAGTCACTCGACCACTTAGA
GTTCTCACAAATCAACATCCATTCCTCAAGACTTCTATTGAGACGGTGCAGGTTGATTGTGATACAGATTCCTCTAATGGAGAAGACAATGTGGTTCTGTCAAAGTTGTT
TAGTCACATGCACAGTGCAAAGCCAACCGAAAGTCGATCGCTTTCACCTCAGCAACCATCAGACTCCTACACCTAGTACAATTCATGTTGCTAAAACACCTAGTAATATA
GATGTTGATATTCTAGATGTTGATGTTCAAGATGAATCCCCTATGTCGATGGGCGATATTCCATCCCCTATTCGCGCTACTGGAAATCCTGGTGTAACTGTGAGAGATAA
TATTGATACTTCGACTAACCCTCGTACTAAGGTTCCTCCTCCTGATTCTGCTTTCTCTCCATCTGTCTCTCTTGCTGATACTCCTGCTCCAACTCTGTCGCGTCCTCCGT
CTAGTGATGCTAGTGGTTCTTTTGTTCTTCGAATGCCTCACCGACAGCTAACCAAAGGTCAAAAGGTGGTTACCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCCCATCATCCAATGTTGGCTCATCTGTTCGTGGCCGCATCTGTATCGACATTTTCGTTGTTTAGGAAGTACATTGGCTTCTGGAAGTCACTCGACCACTTAGA
GTTCTCACAAATCAACATCCATTCCTCAAGACTTCTATTGAGACGGTGCAGGTTGATTGTGATACAGATTCCTCTAATGGAGAAGACAATGTGGTTCTGTCAAAGTTGTT
TAGTCACATGCACAGTGCAAAGCCAACCGAAAGTCGATCGCTTTCACCTCAGCAACCATCAGACTCCTACACCTAGTACAATTCATGTTGCTAAAACACCTAGTAATATA
GATGTTGATATTCTAGATGTTGATGTTCAAGATGAATCCCCTATGTCGATGGGCGATATTCCATCCCCTATTCGCGCTACTGGAAATCCTGGTGTAACTGTGAGAGATAA
TATTGATACTTCGACTAACCCTCGTACTAAGGTTCCTCCTCCTGATTCTGCTTTCTCTCCATCTGTCTCTCTTGCTGATACTCCTGCTCCAACTCTGTCGCGTCCTCCGT
CTAGTGATGCTAGTGGTTCTTTTGTTCTTCGAATGCCTCACCGACAGCTAACCAAAGGTCAAAAGGTGGTTACCAAATAA
Protein sequenceShow/hide protein sequence
MDSHHPMLAHLFVAASVSTFSLFRKYIGFWKSLDHLEFSQINIHSSRLLLRRCRLIVIQIPLMEKTMWFCQSCLVTCTVQSQPKVDRFHLSNHQTPTPSTIHVAKTPSNI
DVDILDVDVQDESPMSMGDIPSPIRATGNPGVTVRDNIDTSTNPRTKVPPPDSAFSPSVSLADTPAPTLSRPPSSDASGSFVLRMPHRQLTKGQKVVTK