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IVF0014548 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014548
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlycine-rich protein family
Genome locationchr02:348682..349688
RNA-Seq ExpressionIVF0014548
SyntenyIVF0014548
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653344.1 hypothetical protein Csa_007318 [Cucumis sativus]7.03e-8289.92Show/hide
Query:  MVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFMQGE
        MVVE FKCFDNKFIYNGCE AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDN+F NFLFYNKATAQSVRNALR+GCS+SSQRGNFNQGLFMQGE
Subjt:  MVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFMQGE

Query:  LSKAHTFQEWFFLHYSFLLLVGCC-FLIL
         S+AHTFQ+WF LHYS L LVGCC FLIL
Subjt:  LSKAHTFQEWFFLHYSFLLLVGCC-FLIL

XP_008450550.1 PREDICTED: uncharacterized protein LOC103492117 [Cucumis melo]5.02e-10099.28Show/hide
Query:  TVNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRG
        +VNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRG
Subjt:  TVNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRG

Query:  NFNQGLFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL
        NFNQGLFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL
Subjt:  NFNQGLFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL

XP_022158829.1 uncharacterized protein LOC111025289 [Momordica charantia]8.41e-7376.12Show/hide
Query:  QEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQG
        +EI GQ+V E+ +CFDNKFIYNGC+S YRLNPSGSFNVPPEATNLFC+GPCL+ET+L+L+CLD++F NFLFYNKA AQ+VRNALR GCS+SSQRGNFN G
Subjt:  QEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQG

Query:  LFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL
        LFMQGE+SKAH+FQ+W  L Y  +LLVGCCF IL
Subjt:  LFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL

XP_031736077.1 uncharacterized protein LOC101204762 [Cucumis sativus]6.95e-8788.41Show/hide
Query:  NGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNF
        + DQEI GQMVVE FKCFDNKFIYNGCE AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDN+F NFLFYNKATAQSVRNALR+GCS+SSQRGNF
Subjt:  NGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNF

Query:  NQGLFMQGELSKAHTFQEWFFLHYSFLLLVGCC-FLIL
        NQGLFMQGE S+AHTFQ+WF LHYS L LVGCC FLIL
Subjt:  NQGLFMQGELSKAHTFQEWFFLHYSFLLLVGCC-FLIL

XP_038878440.1 uncharacterized protein LOC120070674 [Benincasa hispida]8.92e-7380.47Show/hide
Query:  MVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFMQGE
        MVVE+FKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCL+ETQL+LNCLD+ F NF F+NKAT QS RNAL +GCSFSSQRGNFNQGLFMQGE
Subjt:  MVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFMQGE

Query:  LSKAHTFQEWFFLHYSFLLLVGCCFLIL
        +SKAH  Q+WF   Y  + LVGCC  IL
Subjt:  LSKAHTFQEWFFLHYSFLLLVGCCFLIL

TrEMBL top hitse value%identityAlignment
A0A0A0LYD5 Uncharacterized protein8.8e-6588.97Show/hide
Query:  DQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQ
        D EI GQMVVE FKCFDNKFIYNGCE AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDN+F NFLFYNKATAQSVRNALR+GCS+SSQRGNFNQ
Subjt:  DQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQ

Query:  GLFMQGELSKAHTFQEWFFLHYSFLLLVG-CCFLIL
        GLFMQGE S+AHTFQ+WF LHYS L LVG CCFLIL
Subjt:  GLFMQGELSKAHTFQEWFFLHYSFLLLVG-CCFLIL

A0A1S3BPH6 uncharacterized protein LOC1034921171.5e-7599.28Show/hide
Query:  TVNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRG
        +VNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRG
Subjt:  TVNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRG

Query:  NFNQGLFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL
        NFNQGLFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL
Subjt:  NFNQGLFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL

A0A5A7U972 Uncharacterized protein8.6e-5299Show/hide
Query:  TVNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRG
        +VNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRG
Subjt:  TVNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRG

A0A6J1E0J9 uncharacterized protein LOC1110252896.3e-5576.12Show/hide
Query:  QEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQG
        +EI GQ+V E+ +CFDNKFIYNGC+S YRLNPSGSFNVPPEATNLFC+GPCL+ET+L+L+CLD++F NFLFYNKA AQ+VRNALR GCS+SSQRGNFN G
Subjt:  QEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQG

Query:  LFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL
        LFMQGE+SKAH+FQ+W  L Y  +LLVGCCF IL
Subjt:  LFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL

A0A6J1EZD6 uncharacterized protein LOC1114378112.8e-5066Show/hide
Query:  MIYLCCIFCIVTVNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNAL
        ++ L  ++C  +V G +E+ GQ V ++F+CFDN  IY GCESAYRLNP+G+ NVP EATNLFCNGPCLIETQLLLNCLD++FHNFLFYNKAT   ++NAL
Subjt:  MIYLCCIFCIVTVNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNAL

Query:  RIGCSFSSQRGNFNQGLFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL
        R GCS+S+QRGNFN G FMQGE+SK HT Q+W  L+Y F  L+GCCF IL
Subjt:  RIGCSFSSQRGNFNQGLFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56320.1 BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2)5.0e-2852.94Show/hide
Query:  SGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFM
        +G +V  +  CF+N  +Y GC  A+RLN  G F VPPE T+ FCNGPC  ET+L+L C+++   +F+FYN+AT + VRNALR GCS S  RGNFN G + 
Subjt:  SGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFM

Query:  QG
        QG
Subjt:  QG

AT5G49350.1 Glycine-rich protein family8.5e-2039.78Show/hide
Query:  QMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFN
        ++V ++ +C + K IY  C+ ++RL  +G  N+P   T  FC GPC  ET L LNC++   H++ F+N+AT   +R  L+ GCS+  +RG FN
Subjt:  QMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFN

AT5G49350.2 Glycine-rich protein family8.5e-2039.78Show/hide
Query:  QMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFN
        ++V ++ +C + K IY  C+ ++RL  +G  N+P   T  FC GPC  ET L LNC++   H++ F+N+AT   +R  L+ GCS+  +RG FN
Subjt:  QMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQRGNFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTATTTGTGTTGTATTTTCTGTATTGTGACAGTTAATGGTGATCAAGAGATTTCTGGACAAATGGTGGTTGAATCCTTCAAATGCTTTGACAATAAGTTTATATA
CAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTCCTGAGGCTACTAACCTATTTTGCAATGGACCATGTTTGATCGAAACACAACTTT
TGCTCAACTGCCTTGACAACAGTTTTCATAACTTCTTGTTCTACAACAAAGCCACCGCACAAAGCGTTCGAAACGCCCTTCGTATTGGCTGCAGCTTCTCAAGCCAAAGA
GGGAACTTCAATCAAGGATTGTTCATGCAAGGTGAATTAAGTAAAGCTCACACCTTCCAAGAATGGTTCTTCCTCCATTATTCTTTTCTTCTTCTTGTTGGCTGTTGTTT
TCTCATCTTATAA
mRNA sequenceShow/hide mRNA sequence
GATGGTTTTAACTTTTAAGTAATTCTCATGATATGATCTATTTGTGTTGTATTTTCTGTATTGTGACAGTTAATGGTGATCAAGAGATTTCTGGACAAATGGTGGTTGAA
TCCTTCAAATGCTTTGACAATAAGTTTATATACAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTCCTGAGGCTACTAACCTATTTTG
CAATGGACCATGTTTGATCGAAACACAACTTTTGCTCAACTGCCTTGACAACAGTTTTCATAACTTCTTGTTCTACAACAAAGCCACCGCACAAAGCGTTCGAAACGCCC
TTCGTATTGGCTGCAGCTTCTCAAGCCAAAGAGGGAACTTCAATCAAGGATTGTTCATGCAAGGTGAATTAAGTAAAGCTCACACCTTCCAAGAATGGTTCTTCCTCCAT
TATTCTTTTCTTCTTCTTGTTGGCTGTTGTTTTCTCATCTTATAA
Protein sequenceShow/hide protein sequence
MIYLCCIFCIVTVNGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQR
GNFNQGLFMQGELSKAHTFQEWFFLHYSFLLLVGCCFLIL