; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0014559 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014559
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr09:6043700..6044092
RNA-Seq ExpressionIVF0014559
SyntenyIVF0014559
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035247.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.05e-4571.09Show/hide
Query:  MGPISPLDSMIHSENNQGQESINNPTQTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSPKYATD
        MGPISPLDSM+ SENN GQ+S+NN T+T A+GE  NQT++VKEG    H K  PS++T  GISKDA T+++ E DRAFKEKLV WLKENELKLSPKY  D
Subjt:  MGPISPLDSMIHSENNQGQESINNPTQTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSPKYATD

Query:  VPSSSYFPVIMSYQNVDLSGHGPLGDKG
        VPSSSYFPV++S QN DLSGHGPLGDKG
Subjt:  VPSSSYFPVIMSYQNVDLSGHGPLGDKG

KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.08e-3660.9Show/hide
Query:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP
        MGPISPL+SMI SENN G +++NN T     ++    E  N T +VKEGA    + +  S++TA G SKDA T ++ E DRAFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP

Query:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG
        KY  DVPSSS FPVI+S QN+D++GHGPLGDKG
Subjt:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG

KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.54e-3761.65Show/hide
Query:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP
        MGPISPL+SMI SENN G ++ NN T     ++    E  N T +VKEGA    + +  S++TA G SKDA T ++ E DRAFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP

Query:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG
        KY  DVPSSSYFPVI+S QN+D++GHGPLGDKG
Subjt:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG

TYK04225.1 hypothetical protein E5676_scaffold24967G00330 [Cucumis melo var. makuwa]9.24e-6279.23Show/hide
Query:  MGPISPLDSMIHSENNQGQESINNPTQTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSPKYATD
        MGPISPLDS+IHSENN GQESINN T+TNAEGE+PNQTNT+KEG +T+H+K  PSKNT  GI KD S E++QEND+AFKEKLVNWLKENELKLSPKY +D
Subjt:  MGPISPLDSMIHSENNQGQESINNPTQTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSPKYATD

Query:  VPSSSYFPVIMSYQNVDLSGHGPLGDKGNT
        + SSS FPVIMS QNVDLS HGPLGDKGNT
Subjt:  VPSSSYFPVIMSYQNVDLSGHGPLGDKGNT

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.54e-3761.65Show/hide
Query:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP
        MGPISPL+SMI SENN G ++ NN T     ++    E  N T +VKEGA    + +  S++TA G SKDA T ++ E DRAFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP

Query:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG
        KY  DVPSSSYFPVI+S QN+D++GHGPLGDKG
Subjt:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG

TrEMBL top hitse value%identityAlignment
A0A5A7US62 LINE-1 retrotransposable element ORF2 protein4.2e-3161.65Show/hide
Query:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP
        MGPISPL+SMI SENN G ++ NN T     ++    E  N T +VKEGA    + +  S++TA G SKDA T ++ E DRAFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP

Query:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG
        KY  DVPSSSYFPVI+S QN+D++GHGPLGDKG
Subjt:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG

A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein1.6e-3060.9Show/hide
Query:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP
        MGPISPL+SMI SENN G +++NN T     ++    E  N T +VKEGA    + +  S++TA G SKDA T ++ E DRAFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP

Query:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG
        KY  DVPSSS FPVI+S QN+D++GHGPLGDKG
Subjt:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG

A0A5D3BYJ0 Uncharacterized protein1.8e-5079.23Show/hide
Query:  MGPISPLDSMIHSENNQGQESINNPTQTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSPKYATD
        MGPISPLDS+IHSENN GQESINN T+TNAEGE+PNQTNT+KEG +T+H+K  PSKNT  GI KD S E++QEND+AFKEKLVNWLKENELKLSPKY +D
Subjt:  MGPISPLDSMIHSENNQGQESINNPTQTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSPKYATD

Query:  VPSSSYFPVIMSYQNVDLSGHGPLGDKGNT
        + SSS FPVIMS QNVDLS HGPLGDKGNT
Subjt:  VPSSSYFPVIMSYQNVDLSGHGPLGDKGNT

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein4.2e-3161.65Show/hide
Query:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP
        MGPISPL+SMI SENN G ++ NN T     ++    E  N T +VKEGA    + +  S++TA G SKDA T ++ E DRAFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSMIHSENNQGQESINNPT-----QTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSP

Query:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG
        KY  DVPSSSYFPVI+S QN+D++GHGPLGDKG
Subjt:  KYATDVPSSSYFPVIMSYQNVDLSGHGPLGDKG

A0A5D3DFM9 LINE-1 retrotransposable element ORF2 protein1.6e-3871.09Show/hide
Query:  MGPISPLDSMIHSENNQGQESINNPTQTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSPKYATD
        MGPISPLDSM+ SENN GQ+S+NN T+T A+GE  NQT++VKEG    H K  PS++T  GISKDA T+++ E DRAFKEKLV WLKENELKLSPKY  D
Subjt:  MGPISPLDSMIHSENNQGQESINNPTQTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSPKYATD

Query:  VPSSSYFPVIMSYQNVDLSGHGPLGDKG
        VPSSSYFPV++S QN DLSGHGPLGDKG
Subjt:  VPSSSYFPVIMSYQNVDLSGHGPLGDKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCCATCTCTCCTTTGGACTCTATGATTCACTCAGAAAACAACCAAGGACAGGAATCCATCAACAACCCGACACAAACAAATGCTGAAGGAGAAGATCCAAATCA
GACTAACACTGTAAAAGAAGGAGCAAAGACCCTACATGAAAAAGAGTTTCCTTCAAAAAACACAGCAGTTGGAATATCAAAGGATGCAAGCACTGAAAATGACCAGGAAA
ACGACAGAGCCTTCAAGGAAAAATTAGTAAATTGGCTAAAGGAAAACGAACTCAAACTGTCTCCAAAATATGCCACTGATGTACCTAGTTCTTCGTACTTTCCTGTCATT
ATGTCTTATCAAAATGTGGATCTTTCAGGCCATGGGCCATTGGGGGATAAGGGTAATACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCCATCTCTCCTTTGGACTCTATGATTCACTCAGAAAACAACCAAGGACAGGAATCCATCAACAACCCGACACAAACAAATGCTGAAGGAGAAGATCCAAATCA
GACTAACACTGTAAAAGAAGGAGCAAAGACCCTACATGAAAAAGAGTTTCCTTCAAAAAACACAGCAGTTGGAATATCAAAGGATGCAAGCACTGAAAATGACCAGGAAA
ACGACAGAGCCTTCAAGGAAAAATTAGTAAATTGGCTAAAGGAAAACGAACTCAAACTGTCTCCAAAATATGCCACTGATGTACCTAGTTCTTCGTACTTTCCTGTCATT
ATGTCTTATCAAAATGTGGATCTTTCAGGCCATGGGCCATTGGGGGATAAGGGTAATACATGA
Protein sequenceShow/hide protein sequence
MGPISPLDSMIHSENNQGQESINNPTQTNAEGEDPNQTNTVKEGAKTLHEKEFPSKNTAVGISKDASTENDQENDRAFKEKLVNWLKENELKLSPKYATDVPSSSYFPVI
MSYQNVDLSGHGPLGDKGNT