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IVF0014565 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014565
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr08:11776119..11776580
RNA-Seq ExpressionIVF0014565
SyntenyIVF0014565
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025800.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.44e-105100Show/hide
Query:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAAVLE
        MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAAVLE
Subjt:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAAVLE

Query:  EPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFFIK
        EPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFFIK
Subjt:  EPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFFIK

KAA0037866.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.82e-4757.22Show/hide
Query:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQ--SDTGYVSLVMMMSVFRTGYYDSGVDQSSDF---------------------------
        MYDVSIVPAP+QR+R LVQE D+LE+VDQHVEEV  VTQTQ  S+  YVS +MMM  F T YYD GV QSSDF                           
Subjt:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQ--SDTGYVSLVMMMSVFRTGYYDSGVDQSSDF---------------------------

Query:  KTQYMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFF
         + YMHGHG  RGEHNEYLYYE    V ++ DEQQQQE         I R YNNKE +VD  NQLEIV VQVVEHIDFFF
Subjt:  KTQYMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFF

KAA0051098.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.91e-4160Show/hide
Query:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKT--------------------------Q
        MYDV IVPAPIQRRRALVQE DELE+VDQH+EEV  VTQT+S+T YVS ++MMS F TGYYD GV QSSDF T                           
Subjt:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKT--------------------------Q

Query:  YMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRI
        YMHGHG  RGEHNEYLYY A AAV EEP+EQQQQEN      +R+
Subjt:  YMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRI

TYK09656.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.45e-60100Show/hide
Query:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAA
        MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAA
Subjt:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAA

TYK09816.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.77e-4957.22Show/hide
Query:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQ--SDTGYVSLVMMMSVFRTGYYDSGVDQSSDF---------------------------
        MYDVSIVPAP+QR+R LVQE D+LE+VDQHVEEV  VTQTQ  S+  YVS +MMM  F T YYD GV QSSDF                           
Subjt:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQ--SDTGYVSLVMMMSVFRTGYYDSGVDQSSDF---------------------------

Query:  KTQYMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFF
         + YMHGHG  RGEHNEYLYYE    V ++ DEQQQQE         I R YNNKE +VD  NQLEIV VQVVEHIDFFF
Subjt:  KTQYMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFF

TrEMBL top hitse value%identityAlignment
A0A5A7SI16 GATA zinc finger domain-containing protein 10-like isoform X23.4e-80100Show/hide
Query:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAAVLE
        MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAAVLE
Subjt:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAAVLE

Query:  EPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFFIK
        EPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFFIK
Subjt:  EPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFFIK

A0A5A7T6Q6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-3856.59Show/hide
Query:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALV--TQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDF---------------------------
        MYDVSIVPAP+QR+R LVQE D+LE+VDQHVEEV  V  TQTQS+  YVS +MMM  F T YYD GV QSSDF                           
Subjt:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALV--TQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDF---------------------------

Query:  KTQYMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFFIK
         + YMHGHG  RGEHNEYLYYE    V ++ DEQQQQE         I R YNNKE +VD  NQLEIV VQVVEHIDFFF +
Subjt:  KTQYMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFFIK

A0A5A7U731 Serine/threonine-protein phosphatase 7 long form-like protein2.4e-3360Show/hide
Query:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKT--------------------------Q
        MYDV IVPAPIQRRRALVQE DELE+VDQH+EEV  VTQT+S+T YVS ++MMS F TGYYD GV QSSDF T                           
Subjt:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKT--------------------------Q

Query:  YMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRI
        YMHGHG  RGEHNEYLYY A AAV EEP+EQQQQEN      +R+
Subjt:  YMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRI

A0A5D3CH08 GATA zinc finger domain-containing protein 10-like isoform X27.2e-46100Show/hide
Query:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAA
        MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAA
Subjt:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAA

A0A5D3CHF6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-3856.59Show/hide
Query:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALV--TQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDF---------------------------
        MYDVSIVPAP+QR+R LVQE D+LE+VDQHVEEV  V  TQTQS+  YVS +MMM  F T YYD GV QSSDF                           
Subjt:  MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALV--TQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDF---------------------------

Query:  KTQYMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFFIK
         + YMHGHG  RGEHNEYLYYE    V ++ DEQQQQE         I R YNNKE +VD  NQLEIV VQVVEHIDFFF +
Subjt:  KTQYMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQENWRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFFIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGATGTATCTATTGTACCTGCTCCAATTCAAAGGAGACGTGCTCTAGTGCAAGAGCCTGATGAATTGGAAAAAGTTGACCAACATGTGGAAGAAGTGGCTCTCGT
CACACAAACACAGAGTGACACTGGTTACGTTAGTCTAGTGATGATGATGTCGGTGTTTCGAACGGGATATTATGATTCAGGAGTCGATCAATCGTCAGACTTCAAAACAC
AATACATGCATGGTCACGGGCACGATCGTGGAGAACATAACGAATATTTATACTACGAAGCGCTTGCAGCGGTACTTGAGGAACCAGATGAGCAACAACAACAAGAGAAC
TGGAGGAACTACAACAACAAGAGAATCTGGAGGAACTACAACAACAAAGAGTGCAAAGTCGATGGCTACAACCAGCTAGAAATCGTCAAAGTCCAAGTTGTGGAACACAT
TGATTTTTTTTTCATTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTACGATGTATCTATTGTACCTGCTCCAATTCAAAGGAGACGTGCTCTAGTGCAAGAGCCTGATGAATTGGAAAAAGTTGACCAACATGTGGAAGAAGTGGCTCTCGT
CACACAAACACAGAGTGACACTGGTTACGTTAGTCTAGTGATGATGATGTCGGTGTTTCGAACGGGATATTATGATTCAGGAGTCGATCAATCGTCAGACTTCAAAACAC
AATACATGCATGGTCACGGGCACGATCGTGGAGAACATAACGAATATTTATACTACGAAGCGCTTGCAGCGGTACTTGAGGAACCAGATGAGCAACAACAACAAGAGAAC
TGGAGGAACTACAACAACAAGAGAATCTGGAGGAACTACAACAACAAAGAGTGCAAAGTCGATGGCTACAACCAGCTAGAAATCGTCAAAGTCCAAGTTGTGGAACACAT
TGATTTTTTTTTCATTAAATGA
Protein sequenceShow/hide protein sequence
MYDVSIVPAPIQRRRALVQEPDELEKVDQHVEEVALVTQTQSDTGYVSLVMMMSVFRTGYYDSGVDQSSDFKTQYMHGHGHDRGEHNEYLYYEALAAVLEEPDEQQQQEN
WRNYNNKRIWRNYNNKECKVDGYNQLEIVKVQVVEHIDFFFIK