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IVF0014583 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014583
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr10:6332364..6332618
RNA-Seq ExpressionIVF0014583
SyntenyIVF0014583
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047525.1 gag/pol protein [Cucumis melo var. makuwa]5.73e-4185.71Show/hide
Query:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN
        +GKGKEVEANVAT EKELVGGSSSKTRVGTLN+KKK+KGKTPKNSK KKVAK KCY CNED HWLRNC KYL KKK EKEA+GN
Subjt:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN

KAA0050332.1 gag/pol protein [Cucumis melo var. makuwa]3.47e-51100Show/hide
Query:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN
        MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN
Subjt:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN

TYK04285.1 gag/pol protein [Cucumis melo var. makuwa]1.53e-4084.52Show/hide
Query:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN
        MGKGKEVE NV T EKELVGGSSSKTRVGTLN+KKK+KGKTPKNS+ KKVAKGKCY CNEDGHWLRNC KYLT+KK +KEAQ N
Subjt:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN

TYK16526.1 gag/pol protein [Cucumis melo var. makuwa]3.93e-3983.33Show/hide
Query:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN
        MGKGKEVEANVAT EKELVGGSS KTR GTLN+KKK+K KTPKNS+ KKVAKGKCY CNEDG+WLRNC KYL  KK EKEAQGN
Subjt:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN

TYK19205.1 gag/pol protein [Cucumis melo var. makuwa]4.92e-4084.52Show/hide
Query:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN
        MGKG+EVEANVAT EKELV GSSSKTRV TLN+KKK+KGK PKNS+RKKVAKGKCY CNE+GHWLRNC KYL KKK EKEAQGN
Subjt:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN

TrEMBL top hitse value%identityAlignment
A0A5A7U1L7 Gag/pol protein1.8e-3085.71Show/hide
Query:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN
        +GKGKEVEANVAT EKELVGGSSSKTRVGTLN+KKK+KGKTPKNSK KKVAK KCY CNED HWLRNC KYL KKK EKEA+GN
Subjt:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN

A0A5A7U3B6 Gag/pol protein8.8e-38100Show/hide
Query:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN
        MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN
Subjt:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN

A0A5D3BYQ2 Gag/pol protein1.0e-3084.52Show/hide
Query:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN
        MGKGKEVE NV T EKELVGGSSSKTRVGTLN+KKK+KGKTPKNS+ KKVAKGKCY CNEDGHWLRNC KYLT+KK +KEAQ N
Subjt:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN

A0A5D3D6P7 Gag/pol protein1.2e-2984.52Show/hide
Query:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN
        MGKG+EVEANVAT EKELV GSSSKTRV TLN+KKK+KGK PKNS+RKKVAKGKCY CNE+GHWLRNC KYL KKK EKEAQGN
Subjt:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN

A0A5D3E1U5 Gag/pol protein5.7e-2983.13Show/hide
Query:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQG
        MGKGKEVEAN+AT EKELVGGSSSKTRVG   +KKK KGKTPKNSK KKVAKGKCY CNEDGHWLRNC +YL +KK EKEAQG
Subjt:  MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGGGAAAGGAAGTGGAAGCAAATGTTGCTACCAGAGAGAAAGAGTTAGTAGGAGGATCGTCCTCTAAGACTAGAGTTGGAACTTTAAATTTGAAGAAGAAGAA
AAAGGGGAAGACTCCCAAGAATAGTAAAAGAAAGAAAGTTGCTAAAGGTAAATGTTATGATTGCAATGAGGACGGGCATTGGTTGAGAAATTGCTCGAAGTACCTTACTA
AGAAGAAAGTTGAGAAGGAAGCACAAGGAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAGGGAAAGGAAGTGGAAGCAAATGTTGCTACCAGAGAGAAAGAGTTAGTAGGAGGATCGTCCTCTAAGACTAGAGTTGGAACTTTAAATTTGAAGAAGAAGAA
AAAGGGGAAGACTCCCAAGAATAGTAAAAGAAAGAAAGTTGCTAAAGGTAAATGTTATGATTGCAATGAGGACGGGCATTGGTTGAGAAATTGCTCGAAGTACCTTACTA
AGAAGAAAGTTGAGAAGGAAGCACAAGGAAACTAG
Protein sequenceShow/hide protein sequence
MGKGKEVEANVATREKELVGGSSSKTRVGTLNLKKKKKGKTPKNSKRKKVAKGKCYDCNEDGHWLRNCSKYLTKKKVEKEAQGN