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IVF0014607 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014607
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUbiquitin-related modifier 1 homolog
Genome locationchr11:30713663..30720429
RNA-Seq ExpressionIVF0014607
SyntenyIVF0014607
Gene Ontology termsGO:0002098 - tRNA wobble uridine modification (biological process)
GO:0032447 - protein urmylation (biological process)
GO:0034227 - tRNA thio-modification (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0031386 - protein tag (molecular function)
InterPro domainsIPR012675 - Beta-grasp domain superfamily
IPR015221 - Ubiquitin-related modifier 1
IPR016155 - Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593693.1 Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. sororia]7.91e-6394.95Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        MQLTLEFGGGLELLC+SVKIHNVSI+PENG GKL+MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

XP_004144991.1 ubiquitin-related modifier 1 homolog 2 [Cucumis sativus]1.67e-6497.98Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGK IMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

XP_008460154.1 PREDICTED: ubiquitin-related modifier 1 homolog 2 [Cucumis melo]1.44e-65100Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

XP_022999845.1 ubiquitin-related modifier 1 homolog 2 [Cucurbita maxima]1.95e-6395.96Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        MQLTLEFGGGLELLC+SVKIHNVSI+PENGVGKL+MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

XP_038876423.1 ubiquitin-related modifier 1 homolog 2 isoform X1 [Benincasa hispida]3.37e-6497.98Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        MQLTLEFGGGLELLC+SVKIHNVSIDPENGVGKLIMKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

TrEMBL top hitse value%identityAlignment
A0A1S3CCC7 Ubiquitin-related modifier 1 homolog4.2e-50100Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

A0A5D3DLM7 Ubiquitin-related modifier 1 homolog5.7e-4793.2Show/hide
Query:  LKMQLTLEF--GGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        + M LTL+F   GGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
Subjt:  LKMQLTLEF--GGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

A0A6J1CWE9 Ubiquitin-related modifier 1 homolog6.7e-4895.96Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        M LTLEFGGGLELLCNSVKIHNVSIDPENG GKLIMKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

A0A6J1HIP6 Ubiquitin-related modifier 1 homolog2.5e-4792.93Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        MQLTLEFGGGLELLC+SVKIHN+SI+PENG GKL+MKDLLSWVR+NLIKERPEMFMKG+TVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

A0A6J1KGQ8 Ubiquitin-related modifier 1 homolog1.8e-4895.96Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        MQLTLEFGGGLELLC+SVKIHNVSI+PENGVGKL+MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

SwissProt top hitse value%identityAlignment
A0MDQ1 Ubiquitin-related modifier 1 homolog 11.5e-4181.19Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGK--LIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        MQLTLEFGGGLELLC+S KIH V++D  NG       MK LLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTLHG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGK--LIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

B3H7G2 Ubiquitin-related modifier 1 homolog 23.7e-4384.85Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        MQ TLEFGGGLELLC+SVKIH V+I+  N    L MKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLE+KDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

B6SXH2 Ubiquitin-related modifier 1 homolog1.5e-3674.26Show/hide
Query:  MQLTLEFGGGLELLC-NSVKIHNVSI-DPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        M LTLEFGGGLELL  NS K+H V +  P++G GK+ MK LLSWV+ NLIKERPEMF+K D+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHG
Subjt:  MQLTLEFGGGLELLC-NSVKIHNVSI-DPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

Q0D6M1 Ubiquitin-related modifier 1 homolog2.7e-3874Show/hide
Query:  MQLTLEFGGGLELLC-NSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        M LTLEFGGGLELL   S K+H V + P +G GK++MK LL+WV++NLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Subjt:  MQLTLEFGGGLELLC-NSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

Q7GBC8 Ubiquitin-related modifier 1 homolog2.7e-3874Show/hide
Query:  MQLTLEFGGGLELLC-NSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        M LTLEFGGGLELL   S K+H V + P +G GK++MK LL+WV++NLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Subjt:  MQLTLEFGGGLELLC-NSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

Arabidopsis top hitse value%identityAlignment
AT2G45695.1 Ubiquitin related modifier 11.1e-4281.19Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGK--LIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        MQLTLEFGGGLELLC+S KIH V++D  NG       MK LLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTLHG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGK--LIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

AT3G61113.1 Ubiquitin related modifier 12.6e-4484.85Show/hide
Query:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        MQ TLEFGGGLELLC+SVKIH V+I+  N    L MKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLE+KDV+VFISTLHGG
Subjt:  MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGAGGAGAAACTCCCTCAGCCAGCCAAAAGAAAACTTCCGTCTTAATTGGGAAGATATTGAGGAGGTTATGGGAAGGAAGTTCAGGGAACAAAAAGGAAGTGTT
GGGGTTTGTAATGGAGGGGTTCCAAGTTCGAGGGAGAGCAGATTCGAGTGCAGAGTTGGAGTTTTCAGGGATGAAAAAAGGAAGAAGGGTTTTAGGGTTCCGCGGAACGA
AATTGAAAATGCAATTGACACTTGAATTTGGTGGAGGATTGGAGTTACTATGTAACTCTGTAAAGATCCACAATGTCAGCATTGATCCCGAAAATGGAGTGGGAAAGTTA
ATTATGAAGGATTTGCTCTCTTGGGTTCGAGCTAACCTGATCAAGGAGCGGCCGGAAATGTTTATGAAAGGCGACACTGTAAGACCTGGTGTTCTGGTGCTTGTAAATGA
TTGTGATTGGGAGCTTAGTGGGCAGCTTGACACAACATTGGAAGAGAAAGACGTGGTAGTGTTCATATCCACCTTGCATGGAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACGAGGAGAAACTCCCTCAGCCAGCCAAAAGAAAACTTCCGTCTTAATTGGGAAGATATTGAGGAGGTTATGGGAAGGAAGTTCAGGGAACAAAAAGGAAGTGTT
GGGGTTTGTAATGGAGGGGTTCCAAGTTCGAGGGAGAGCAGATTCGAGTGCAGAGTTGGAGTTTTCAGGGATGAAAAAAGGAAGAAGGGTTTTAGGGTTCCGCGGAACGA
AATTGAAAATGCAATTGACACTTGAATTTGGTGGAGGATTGGAGTTACTATGTAACTCTGTAAAGATCCACAATGTCAGCATTGATCCCGAAAATGGAGTGGGAAAGTTA
ATTATGAAGGATTTGCTCTCTTGGGTTCGAGCTAACCTGATCAAGGAGCGGCCGGAAATGTTTATGAAAGGCGACACTGTAAGACCTGGTGTTCTGGTGCTTGTAAATGA
TTGTGATTGGGAGCTTAGTGGGCAGCTTGACACAACATTGGAAGAGAAAGACGTGGTAGTGTTCATATCCACCTTGCATGGAGGCTAG
Protein sequenceShow/hide protein sequence
MKRGETPSASQKKTSVLIGKILRRLWEGSSGNKKEVLGFVMEGFQVRGRADSSAELEFSGMKKGRRVLGFRGTKLKMQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKL
IMKDLLSWVRANLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG