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IVF0014610 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014610
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr02:13711704..13711922
RNA-Seq ExpressionIVF0014610
SyntenyIVF0014610
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]2.91e-2270.83Show/hide
Query:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV
        MS DELMGIR A+VS+ R V +GSKRKR+GQATD+ DV+ TAIEY N Q N I EWP+LQ QD SQTRQEVV
Subjt:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV

KAA0050216.1 retrotransposon protein [Cucumis melo var. makuwa]2.80e-2369.44Show/hide
Query:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV
        MS D+LMG RTARVS+ R VL+GSKRKR G ATD+ D++ TAIEY N Q N I EWPVLQ QD SQTRQE+V
Subjt:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV

KAA0051580.1 retrotransposon protein [Cucumis melo var. makuwa]8.39e-2263.89Show/hide
Query:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV
        MS D+LM  RTARVS+ R V +GSKRKR G ATD+ D++ TAIEY N Q + I EWP+LQLQD +QTRQE+V
Subjt:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV

KAA0063726.1 retrotransposon protein [Cucumis melo var. makuwa]1.16e-2168.06Show/hide
Query:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV
        MS D+LMG RTARVS+ R V +GSKRKR G ATD+ D++ TAIEY N Q N I EWPVLQ Q+ SQTRQEVV
Subjt:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV

TYK10954.1 retrotransposon protein [Cucumis melo var. makuwa]1.16e-2168.06Show/hide
Query:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV
        MS D+LMG RTARVS+ R V +GSKRKR G ATD+ D++ TAIEY N Q N I EWPVLQ Q+ SQTRQEVV
Subjt:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV

TrEMBL top hitse value%identityAlignment
A0A5A7SXX8 Retrotransposon protein6.6e-1870.83Show/hide
Query:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV
        MS DELMGIR A+VS+ R V +GSKRKR+GQATD+ DV+ TAIEY N Q N I EWP+LQ QD SQTRQEVV
Subjt:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV

A0A5A7U7R0 Retrotransposon protein6.6e-1869.44Show/hide
Query:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV
        MS D+LMG RTARVS+ R VL+GSKRKR G ATD+ D++ TAIEY N Q N I EWPVLQ QD SQTRQE+V
Subjt:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV

A0A5A7UXH8 Retrotransposon protein5.6e-1766.67Show/hide
Query:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV
        MS D+LM  RTARVS+ R V NGSKRKR G ATD+ D++ TAIEYEN Q + I EWP+LQ QD SQTRQE+V
Subjt:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV

A0A5A7VBC5 Retrotransposon protein4.3e-1768.06Show/hide
Query:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV
        MS D+LMG RTARVS+ R V +GSKRKR G ATD+ D++ TAIEY N Q N I EWPVLQ Q+ SQTRQEVV
Subjt:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV

A0A5D3CIF5 Retrotransposon protein4.3e-1768.06Show/hide
Query:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV
        MS D+LMG RTARVS+ R V +GSKRKR G ATD+ D++ TAIEY N Q N I EWPVLQ Q+ SQTRQEVV
Subjt:  MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTTGACGAATTAATGGGAATAAGAACCGCTCGGGTAAGTGACAGTAGGTGTGTTTTGAATGGGTCTAAGCGGAAACGTGAAGGACAGGCCACAGACAATAGGGA
CGTAATTCACACTGCGATTGAGTACGAAAACGGACAATTTAACCACATTGTTGAATGGCCTGTCCTACAACTTCAAGACGTAAGCCAAACGCGGCAAGAGGTCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTTGACGAATTAATGGGAATAAGAACCGCTCGGGTAAGTGACAGTAGGTGTGTTTTGAATGGGTCTAAGCGGAAACGTGAAGGACAGGCCACAGACAATAGGGA
CGTAATTCACACTGCGATTGAGTACGAAAACGGACAATTTAACCACATTGTTGAATGGCCTGTCCTACAACTTCAAGACGTAAGCCAAACGCGGCAAGAGGTCGTTTGA
Protein sequenceShow/hide protein sequence
MSLDELMGIRTARVSDSRCVLNGSKRKREGQATDNRDVIHTAIEYENGQFNHIVEWPVLQLQDVSQTRQEVV