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IVF0014617 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014617
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr10:22101206..22101598
RNA-Seq ExpressionIVF0014617
SyntenyIVF0014617
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025555.1 uncharacterized protein E6C27_scaffold253G00440 [Cucumis melo var. makuwa]2.65e-8192.31Show/hide
Query:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRR GYLSPRFNNDEGEKFGCANEKQCLFH EIDDHFIEDCCE KNEVQKLMDAKILLV Q+SMQEI+VDMIIDKETSNDTSIT+IS+NTISP
Subjt:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLV Q PPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

KAA0050802.1 Gag-pro-like protein [Cucumis melo var. makuwa]3.27e-8092.31Show/hide
Query:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILR  GYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLV QMSMQEI+VD+IIDK+TSNDTSITVIS+NTISP
Subjt:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLV Q PPKFELNNWEIKRTLKV KGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

KAA0056811.1 Gag-pro-like protein [Cucumis melo var. makuwa]3.40e-86100Show/hide
Query:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ

KAA0063108.1 uncharacterized protein E6C27_scaffold1337G00160 [Cucumis melo var. makuwa]2.36e-8494.62Show/hide
Query:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRR GYLSPRFNND+GEKFGCANEKQCLFHPEIDDHFI+DCCEFKNEVQKLMDAKIL V QMSMQ+I+VDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

TYK00168.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]2.75e-8294.57Show/hide
Query:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRR GYLSPRFNND+GEKFGCANEKQCLFHPEIDDHFI+DCCEFKNEVQKLMDAKIL V QMSMQ+I+VDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ

TrEMBL top hitse value%identityAlignment
A0A5A7ULI2 Retrotrans_gag domain-containing protein1.3e-6496.92Show/hide
Query:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRR GYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLV QMSMQEI+VDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLVSQFPPKFELNNWEIKRTLKV+KGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

A0A5A7V655 Uncharacterized protein5.5e-6394.62Show/hide
Query:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRR GYLSPRFNND+GEKFGCANEKQCLFHPEIDDHFI+DCCEFKNEVQKLMDAKIL V QMSMQ+I+VDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

A0A5A7VBN6 Retrotrans_gag domain-containing protein9.4e-6394.62Show/hide
Query:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRR GYLSPRFNND+GEK GC NEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLV QMSMQEI+VDMIIDKETSNDTS TVISKNTISP
Subjt:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQK

A0A5D3BJJ2 Gag-pro-like protein1.1e-66100Show/hide
Query:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ

A0A5D3BM27 Putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H1.6e-6294.57Show/hide
Query:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP
        MNTLFQILRR GYLSPRFNND+GEKFGCANEKQCLFHPEIDDHFI+DCCEFKNEVQKLMDAKIL V QMSMQ+I+VDMIIDKETSNDTSITVISKNTISP
Subjt:  MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISP

Query:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
        NLLVSQFPPKFELNNWEIKRTLKVSKGSQ
Subjt:  NLLVSQFPPKFELNNWEIKRTLKVSKGSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACACTTTTCCAAATCCTTCGTAGAGATGGATATTTGTCACCAAGGTTTAACAATGATGAGGGGGAGAAGTTTGGATGCGCCAATGAGAAGCAGTGTTTATTCCA
CCCTGAGATAGATGACCATTTCATTGAAGATTGTTGTGAGTTCAAGAATGAGGTACAAAAGTTGATGGATGCAAAGATTCTCTTGGTAAGACAAATGAGCATGCAAGAAA
TCAAGGTCGATATGATTATTGATAAGGAAACTTCAAATGATACCTCAATTACGGTTATCTCCAAGAATACTATTTCGCCTAATCTATTGGTTTCTCAGTTTCCACCAAAA
TTTGAGTTGAACAATTGGGAGATCAAGAGGACGCTAAAAGTCTCTAAAGGATCACAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATACACTTTTCCAAATCCTTCGTAGAGATGGATATTTGTCACCAAGGTTTAACAATGATGAGGGGGAGAAGTTTGGATGCGCCAATGAGAAGCAGTGTTTATTCCA
CCCTGAGATAGATGACCATTTCATTGAAGATTGTTGTGAGTTCAAGAATGAGGTACAAAAGTTGATGGATGCAAAGATTCTCTTGGTAAGACAAATGAGCATGCAAGAAA
TCAAGGTCGATATGATTATTGATAAGGAAACTTCAAATGATACCTCAATTACGGTTATCTCCAAGAATACTATTTCGCCTAATCTATTGGTTTCTCAGTTTCCACCAAAA
TTTGAGTTGAACAATTGGGAGATCAAGAGGACGCTAAAAGTCTCTAAAGGATCACAAAAGTAA
Protein sequenceShow/hide protein sequence
MNTLFQILRRDGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQKLMDAKILLVRQMSMQEIKVDMIIDKETSNDTSITVISKNTISPNLLVSQFPPK
FELNNWEIKRTLKVSKGSQK