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IVF0014657 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014657
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr03:3826295..3826786
RNA-Seq ExpressionIVF0014657
SyntenyIVF0014657
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035182.1 uncharacterized protein E6C27_scaffold57G002840 [Cucumis melo var. makuwa]6.91e-6679.19Show/hide
Query:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD
        MS+DE+V EYNERVLEIAN SFNLGEKI ESKIVRK+L SLPGK DMKVT IEEAHDITKLKLDELFGSLLTF+M ISNRENKKG  V  KSVYEEESTD
Subjt:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD

Query:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGE
        NKSPS  N           FSKVVKKF+NMNTTGSNSRNSINF+RRD E
Subjt:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGE

KAA0039000.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.84e-6065.19Show/hide
Query:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD
        MS+DE+V+ YNER+LEI NES  LGEKI ESKIVRKVLRSLPGKFDMKVT IEE HDITKLKL+ELFGSLLTF+M IS+RENKKGKD+ FKS+YE+ES  
Subjt:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD

Query:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNKI
        +++  E +           FSK+VKKF+N+NTTGS+++N  N++R+DGE+Y RR N++
Subjt:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNKI

KAA0048271.1 Receptor-like protein 12 [Cucumis melo var. makuwa]3.46e-6373.89Show/hide
Query:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD
        MSEDE+V EYNERVLEIANES  LGEKIPESKIV K+LRSL  KFDMKVT IEEAHDITKLKLDELF SLL+F++ ISNRENKKGK V FKSVYEEEST 
Subjt:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD

Query:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNK
        NKS S+ N           FSK+VKKF+NMN  GSNSRN  N++RRDGESYNR +NK
Subjt:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNK

KAA0052278.1 Receptor-like protein 12 [Cucumis melo var. makuwa]2.05e-7279.49Show/hide
Query:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD
        MS+DE+VVEYNE+VLEI NESFNLGEKIP+SKIVRKVLRSLPGKF+MKVT I+EAHDITKLKLD  F SLLTF+M ISNRENKKGK V FKSVYEEESTD
Subjt:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD

Query:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDN
        NKS SE N           FSKVVKKFRN+N  GSNSRNS+NFKRRDGESYNRRDN
Subjt:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDN

KAA0054430.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]5.12e-6571.7Show/hide
Query:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD
        MSEDETV  YNERV+EIANESFNLG++I E KIVRKVLRSLPGKFDMKV  I+E HDIT LKLDELF SLL F+M ISNRE+KKGK + FKS+YEEES D
Subjt:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD

Query:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNKIL
        NK  SE N           FSKVVK+FRNMN+TGSN+RNSI F+RRDGESY RRD++ L
Subjt:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNKIL

TrEMBL top hitse value%identityAlignment
A0A5A7SVB2 Uncharacterized protein1.1e-5179.19Show/hide
Query:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD
        MS+DE+V EYNERVLEIAN SFNLGEKI ESKIVRK+L SLPGK DMKVT IEEAHDITKLKLDELFGSLLTF+M ISNRENKKG  V  KSVYEEESTD
Subjt:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD

Query:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGE
        NKSPS  N           FSKVVKKF+NMNTTGSNSRNSINF+RRD E
Subjt:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGE

A0A5A7U3Y3 Receptor-like protein 128.1e-5073.89Show/hide
Query:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD
        MSEDE+V EYNERVLEIANES  LGEKIPESKIV K+LRSL  KFDMKVT IEEAHDITKLKLDELF SLL+F++ ISNRENKKGK V FKSVYEEEST 
Subjt:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD

Query:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNK
        NKS S+ N           FSK+VKKF+NMN  GSNSRN  N++RRDGESYNR +NK
Subjt:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNK

A0A5A7UAM6 Receptor-like protein 121.2e-5678.98Show/hide
Query:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD
        MS+DE+VVEYNE+VLEI NESFNLGEKIP+SKIVRKVLRSLPGKF+MKVT I+EAHDITKLKLD  F SLLTF+M ISNRENKKGK V FKSVYEEESTD
Subjt:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD

Query:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNK
        NKS SE N           FSKVVKKFRN+N  GSNSRNS+NFKRRDGESYNRRDN+
Subjt:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNK

A0A5D3CW16 Gag-proteinase polyprotein1.6e-5071.7Show/hide
Query:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD
        MSEDETV  YNERV+EIANESFNLG++I E KIVRKVLRSLPGKFDMKV  I+E HDIT LKLDELF SLL F+M ISNRE+KKGK + FKS+YEEES D
Subjt:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD

Query:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNKIL
        NK  SE N           FSKVVK+FRNMN+TGSN+RNSI F+RRDGESY RRD++ L
Subjt:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNKIL

A0A5D3DEG1 Gag-pol polyprotein9.9e-4868.79Show/hide
Query:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD
        +SEDETV EYNERVLEIANES  LGEKIP+SKIVRKVLRSLP KFDMK+T IEEAHDITKLKLDELFGSLLTF+M IS++ENKKGK V FKS+YE+E+T 
Subjt:  MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTD

Query:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNK
        N+S  E N           FS VV+KF+N+NTTGSN++N IN++R+DG++  RR N+
Subjt:  NKSPSEVN-----------FSKVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGAGGATGAGACTGTAGTTGAATATAACGAGAGAGTTCTGGAAATAGCCAATGAATCATTTAACCTTGGAGAAAAGATTCCTGAATCTAAGATAGTGCGAAAAGT
GTTGCGTTCTCTACCTGGGAAATTTGACATGAAGGTTACAACTATAGAGGAAGCACATGATATAACTAAGCTAAAACTGGATGAATTGTTTGGGTCTCTTCTCACGTTCA
AGATGGACATATCAAACAGAGAAAATAAAAAAGGTAAAGATGTTGTTTTTAAATCGGTATATGAAGAAGAGTCAACTGACAATAAATCACCAAGTGAAGTAAATTTTTCT
AAAGTGGTAAAGAAGTTCAGAAATATGAATACAACTGGATCCAACTCTAGGAACTCAATTAACTTCAAAAGAAGAGATGGTGAAAGTTATAATAGAAGGGATAACAAAAT
TTTAATGAAAATATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGAGGATGAGACTGTAGTTGAATATAACGAGAGAGTTCTGGAAATAGCCAATGAATCATTTAACCTTGGAGAAAAGATTCCTGAATCTAAGATAGTGCGAAAAGT
GTTGCGTTCTCTACCTGGGAAATTTGACATGAAGGTTACAACTATAGAGGAAGCACATGATATAACTAAGCTAAAACTGGATGAATTGTTTGGGTCTCTTCTCACGTTCA
AGATGGACATATCAAACAGAGAAAATAAAAAAGGTAAAGATGTTGTTTTTAAATCGGTATATGAAGAAGAGTCAACTGACAATAAATCACCAAGTGAAGTAAATTTTTCT
AAAGTGGTAAAGAAGTTCAGAAATATGAATACAACTGGATCCAACTCTAGGAACTCAATTAACTTCAAAAGAAGAGATGGTGAAAGTTATAATAGAAGGGATAACAAAAT
TTTAATGAAAATATGGTGA
Protein sequenceShow/hide protein sequence
MSEDETVVEYNERVLEIANESFNLGEKIPESKIVRKVLRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFKMDISNRENKKGKDVVFKSVYEEESTDNKSPSEVNFS
KVVKKFRNMNTTGSNSRNSINFKRRDGESYNRRDNKILMKIW