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IVF0014679 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014679
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptiontransmembrane protein 50A
Genome locationchr09:11818593..11831526
RNA-Seq ExpressionIVF0014679
SyntenyIVF0014679
Gene Ontology termsGO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007919 - Uncharacterised protein family UPF0220


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140320.1 transmembrane protein 50A [Cucumis sativus]1.70e-9399.26Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVK GPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_008460472.1 PREDICTED: transmembrane protein 50A [Cucumis melo]2.93e-94100Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_022141734.1 transmembrane protein 50A [Momordica charantia]2.41e-9398.52Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        S+VKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_022993057.1 transmembrane protein 50A [Cucurbita maxima]8.41e-9499.26Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVR+EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_038874577.1 transmembrane protein 50A [Benincasa hispida]4.17e-9499.26Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

TrEMBL top hitse value%identityAlignment
A0A1S3CCJ8 transmembrane protein 50A1.1e-71100Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1CJN8 transmembrane protein 50A5.7e-7198.52Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        S+VKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1FCW9 transmembrane protein 50A-like1.3e-7098.52Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFAS AALMFNCVR+EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1JRP9 transmembrane protein 50A2.5e-7199.26Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVR+EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

D6BRE9 Transmembrane protein 50a, putative1.8e-6994.81Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELW+IFGPGVAGAVFG GWWFW+DAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        S+VKTGPSVWTG AGVLQCVFVL+SGLIYWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

SwissProt top hitse value%identityAlignment
A9CAZ8 Transmembrane protein 50B4.3e-0729.29Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG
        +D +E  +     VAG +F  GWW  +DA V         H  +  G+F++ A  M N V    +    YE    G    ++WLF  +++ F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L   + V     V+ G+A   Q   +  S LIY    +E
Subjt:  LLIQDSVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

O95807 Transmembrane protein 50A9.2e-1031.75Show/hide
Query:  AGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSV
        AG +F  GWW  +DA V       F H  +  G+ A+ A LM N V    +    Y E   G+   ++WLF  ++++F SL AS+ +L    V K    V
Subjt:  AGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSV

Query:  WTGVAGVLQCVFVLVSGLIYWTSHSE
        + G+A   Q  F+   GL++    +E
Subjt:  WTGVAGVLQCVFVLVSGLIYWTSHSE

P56557 Transmembrane protein 50B4.3e-0729.29Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG
        +D +E  +     VAG +F  GWW  +DA V         H  +  G+F++ A  M N V    +    YE    G    ++WLF  +++ F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L   + V     V+ G+A   Q   +  S LIY    +E
Subjt:  LLIQDSVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

Q3SZL9 Transmembrane protein 50B4.3e-0729.29Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG
        +D +E  +     VAG +F  GWW  +DA V         H  +  G+F++ A  M N V    +    YE    G    ++WLF  +++ F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L   + V     V+ G+A   Q   +  S LIY    +E
Subjt:  LLIQDSVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

Q9CXL1 Transmembrane protein 50A5.4e-1030.71Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG
        MD  E  +      AG +F  GWW  +DA V       F H  +  G+ A+ A LM N V    +    Y E   G+   ++WLF  ++++F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L    V K    V+ G+A   Q  F+   GL++    +E
Subjt:  LLIQDSVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

Arabidopsis top hitse value%identityAlignment
AT1G36980.1 unknown protein2.0e-6888.15Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELW+IFGPG +GAVFG GWWFWVDAVVCSS+ V FVHYLPGIFAS  ALMFNCVRKEDIDYSPY+EGEWRLKLWLF AYVV+FVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKTGPS WTGVAGV QCVFVL+SGL+YWTSHSE
Subjt:  SVVKTGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGCGGAGCTGTGGTCAATTTTCGGCCCAGGCGTCGCCGGAGCTGTGTTCGGCGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCCGT
CTCCTTTGTCCACTACCTCCCAGGTATTTTTGCTTCTTTTGCGGCTTTAATGTTCAATTGCGTTCGCAAAGAAGACATCGATTATTCTCCATACGAGGAGGGGGAATGGA
GGTTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCAGTGGGTCTCTTGATACAAGATTCAGTAGTAAAAACTGGGCCATCAGTGTGG
ACAGGAGTTGCAGGAGTGTTACAGTGTGTGTTTGTGTTGGTTAGTGGGTTGATTTACTGGACATCTCACTCGGAGTAG
mRNA sequenceShow/hide mRNA sequence
GGGGGGGGGGGTTAAGGGGGTTTGTGGATGAACGTATCCTCAATTATAGTAAAACGTAATAGCCCAATTCACCCACTCTACCCCTTGAGCCAAACAGGCCTAAATTTCTT
CTCTACTTTTTCTTCTTGCGTTCCTCTAACCGAGAGATAAATGGAGGATGTTGGAATTGGATAGATGGAGGGAGGATAAGAGACTCGAGAATGGTGGAGGGAGGAGGAGG
AGCGTTAAATGAGTGGGTGGTGATCGTTGCAAATGCAGACGAGGGAAGAAGGGGGAGCAGTTGAGCAAGTGGGTCATGACAATTGCGTAAACGAGAGAGGGAAGGGAGCA
ATAGAGAGGGAGATAATGAGTTGCAGACGTAGTTGTGAGGGAGAGATTGAGAGTGAGTGAAAGACTCAATATGGTGGAACAGAAGGAGAGTGAAGAAGAGGGAGACAAGT
GGTTTGATTTTAAATTTAGTTTTCAAAATTGAAAACGAACCGTACCGAACCAGACCAAACCACACAATTTGGCTTAAAAATTCTTTTAAACCAAATCAAACCACATTTTT
AATCTGAGATCAGAGAGAACTTGTAATTTAAATTTTAAAAAAAATGTTTCGATGATATATTTCCCCGAATTTCAGAGGTGCAAGGGAAGGTACGGGATATAACATTGAGC
TGGAAAAGGGTGTGTGCCTGTGAGGTGTGCGATCATTCAGTTCACACTACCCTCTCCAAATCGACCCGCTTCCAACCACTTCCGTAAGGAGAAAGCAAAAACAAAGAACC
CCACAAATGGATTTGGCGGAGCTGTGGTCAATTTTCGGCCCAGGCGTCGCCGGAGCTGTGTTCGGCGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGT
TGCCGTCTCCTTTGTCCACTACCTCCCAGGTATTTTTGCTTCTTTTGCGGCTTTAATGTTCAATTGCGTTCGCAAAGAAGACATCGATTATTCTCCATACGAGGAGGGGG
AATGGAGGTTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCAGTGGGTCTCTTGATACAAGATTCAGTAGTAAAAACTGGGCCATCA
GTGTGGACAGGAGTTGCAGGAGTGTTACAGTGTGTGTTTGTGTTGGTTAGTGGGTTGATTTACTGGACATCTCACTCGGAGTAGGTTGGAAAGAATTATGCACCAAGGCA
AGACCTCAAAAGCTGAAGAGTTTACCAACTGTATAGAGCTCCAGTGTGCACTGCAATGTCGAGTCATTTGTTTTAGTCTATTGACCTGAACCCAAGAGCCTTTTTACTTT
TTGTAAATGTCATGTGTTCAATTATAAGCTGAAACCATGTCTATATGTCTTTATGAATTCAATATAAGTGAGCGAGATATTTAATGTTT
Protein sequenceShow/hide protein sequence
MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVW
TGVAGVLQCVFVLVSGLIYWTSHSE