CuGenDBv2

Gene ID	IVF0014700
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	PMD domain-containing protein
Genome location	chr04:15783168..15783593
RNA-Seq Expression	IVF0014700
Synteny	IVF0014700
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR019557 - Aminotransferase-like, plant mobile domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]

1.81e-86

92.91

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Query:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG
        MLF ELGI+DDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFR  SLMAAGTIYSLAVPVLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFG
Subjt:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG

Query:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI
        THYPLPTEVRGPKMT FSGEG SIYFG+YEARELIHNGARI
Subjt:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI

KAA0047546.1 hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa]

6.55e-86

94.33

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Query:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG
        MLF ELGIKDDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFRAASLMAA TIYSLAVPVLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFG
Subjt:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG

Query:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI
        THYPLPTEVRGPKMT FSGEGGSIYFG+YEARELIHN ARI
Subjt:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]

2.02e-86

91.49

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Query:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG
        MLF ELGI+DDLKDETYLAAFLSCWLCLFVF +KGSFLRP VFR ASLM AGTIYSLAVPVLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFG
Subjt:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG

Query:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI
        THYPLP EVRGPKMT FSGEGGSIYFGKYEA ELIHNGARI
Subjt:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI

TYK06278.1 hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa]

1.17e-85

94.33

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Query:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG
        MLF ELGIKDDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFRAASLMAA TIYSLAVPVLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFG
Subjt:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG

Query:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI
        THYPLPTEVRGPKMT FSGEGGSIYFG+YEARELIHN ARI
Subjt:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]

2.28e-89

93.62

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Query:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG
        MLF ELGI+DDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFR ASLMAAGTIYSLAVPVLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLA+YFG
Subjt:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG

Query:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI
        THYPLPTEVR PKMT FSGEGGSIYFGKYEARELIHNGARI
Subjt:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SHN8 PMD domain-containing protein

1.2e-71

94.33

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Query:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG
        MLF ELGIKDDLKDETYLAAFLSCWLCLF+F QKGSFLRPGVFRAASLMAA TIYSLAVPVLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFG
Subjt:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG

Query:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI
        THYPLPTEVRGPKMT FSGEGGSIYFG+YEARELIHNGARI
Subjt:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI

A0A5A7TZZ9 PMD domain-containing protein

5.9e-71

94.33

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Query:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG
        MLF ELGIKDDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFRAASLMAA TIYSLAVPVLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFG
Subjt:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG

Query:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI
        THYPLPTEVRGPKMT FSGEGGSIYFG+YEARELIHN ARI
Subjt:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI

A0A5A7VHW8 PMD domain-containing protein

2.7e-71

93.62

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Query:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG
        MLF ELGIKDDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFRAASLM AGTIYSLAVPVLANIYHGLGLITKASN  GRM+FHFPMHYVHGWLAHYFG
Subjt:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG

Query:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI
        THYPLPTEVRGPKMT FSGEGGSIYFG+YEAR+LIHNGARI
Subjt:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI

A0A5D3C543 PMD domain-containing protein

5.9e-71

94.33

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Query:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG
        MLF ELGIKDDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFRAASLMAA TIYSLAVPVLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLAHYFG
Subjt:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG

Query:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI
        THYPLPTEVRGPKMT FSGEGGSIYFG+YEARELIHN ARI
Subjt:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI

A0A5D3DCE5 PMD domain-containing protein

7.7e-71

93.62

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Query:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG
        MLF ELGI+DDLKDETYLAAFLSCWLCLFVF QKGSFLRPGVFR ASLMAAGTIYSLAVPVLANIYHGLGLITKASN IGRM+FHFPMHYVHGWLA+YFG
Subjt:  MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFG

Query:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI
        THYPLPTEVR PKMT FSGEGGSIYFGKYEARELIHNGARI
Subjt:  THYPLPTEVRGPKMTKFSGEGGSIYFGKYEARELIHNGARI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTTATTTACAGAACTTGGAATCAAGGATGATTTGAAGGATGAAACGTATTTAGCTGCCTTCTTATCTTGCTGGTTGTGCCTTTTCGTATTTTCTCAGAAAGGATCGTT
TCTTCGTCCTGGAGTATTTAGGGCTGCAAGCCTAATGGCCGCTGGCACTATTTATAGTCTTGCAGTTCCAGTTTTGGCGAACATATACCATGGGCTAGGTTTGATAACCA
AAGCCTCCAATCTGATAGGACGCATGAACTTTCACTTTCCCATGCATTACGTCCATGGATGGTTAGCCCATTATTTTGGCACACATTATCCACTTCCCACAGAAGTTCGA
GGTCCGAAGATGACTAAATTTTCAGGCGAAGGTGGGTCTATTTATTTTGGCAAATATGAGGCACGCGAATTGATCCATAATGGTGCAAGAATTTAG

mRNA sequence

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Protein sequence

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MLFTELGIKDDLKDETYLAAFLSCWLCLFVFSQKGSFLRPGVFRAASLMAAGTIYSLAVPVLANIYHGLGLITKASNLIGRMNFHFPMHYVHGWLAHYFGTHYPLPTEVR
GPKMTKFSGEGGSIYFGKYEARELIHNGARI

IVF0014700 (gene) of Melon (IVF77) v1 genome