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IVF0014734 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014734
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:5275586..5276445
RNA-Seq ExpressionIVF0014734
SyntenyIVF0014734
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031667.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.30e-5651.88Show/hide
Query:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKAK------------------------------------TPVSKPAKQSLRSSALLEVIRRGKMTVGGKD
        MAATL+EE  E KDESDSSKSD HWKR LKKAK                                    TPVSKPA+QSLR SAL E IRR KMT+GGK 
Subjt:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKAK------------------------------------TPVSKPAKQSLRSSALLEVIRRGKMTVGGKD

Query:  IGSPPSKGDVCPKEPLQKVSSTHAPLK---------------------------------------------------------LRLEIATILSGFEKIH
        IGSPPSKGD CPKEPLQKVSS HA LK                                                         LR EIA +LSG EKIH
Subjt:  IGSPPSKGDVCPKEPLQKVSSTHAPLK---------------------------------------------------------LRLEIATILSGFEKIH

Query:  ADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR
        ADGLTPLEEYLN+YLKRVDNFNDVQSSYS+QLLSIDKAR
Subjt:  ADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR

KAA0035005.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.32e-5753.57Show/hide
Query:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKAK---------------------TPVSKPAKQSLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKEP
        MAATLEEE  E K++SDSSKSD HWKRLLKKAK                     TPVS+PA+QSLR SAL E I RGKMTVGGKDIGSP SKGD  PK P
Subjt:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKAK---------------------TPVSKPAKQSLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKEP

Query:  LQKVSSTHAPLK---------------------------------------------------------LRLEIATILSGFEKIHADGLTPLEEYLNNYL
        LQK+SSTHAPL+                                                         LR +IAT+LSG EKIHADGLTPLEEYLN+YL
Subjt:  LQKVSSTHAPLK---------------------------------------------------------LRLEIATILSGFEKIHADGLTPLEEYLNNYL

Query:  KRVDNFNDVQSSYSSQLLSIDKAR
        KRVDNFNDVQSSYS +LLSIDK R
Subjt:  KRVDNFNDVQSSYSSQLLSIDKAR

KAA0050984.1 hypothetical protein E6C27_scaffold3608G00010 [Cucumis melo var. makuwa]1.51e-5261.49Show/hide
Query:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKAK----------------------TPVSKPAKQSLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKE
        M A LEEE KE KDES+S KSDRHWKR LKKAK                      TPVSKPAKQSLR S LLE IRRGKM V GKDIGSP SKGD CPK 
Subjt:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKAK----------------------TPVSKPAKQSLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKE

Query:  PLQKVSSTHAPLK---------------------LRLEIATILSGFEKIHADGLTPLEEYLNNYLKRVDNFNDV
        PLQKV+ST APLK                     LRLEI T+LS  EKIHADGL PLEEYLN+YLKR DNFNDV
Subjt:  PLQKVSSTHAPLK---------------------LRLEIATILSGFEKIHADGLTPLEEYLNNYLKRVDNFNDV

KAA0054388.1 hypothetical protein E6C27_scaffold24G001310 [Cucumis melo var. makuwa]1.96e-5251.1Show/hide
Query:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKAK----------------------------------------------------------TPVSKPAKQ
        MAATL+EE KE KDESDSSKSDRHWKR LKKAK                                                          T VSKP +Q
Subjt:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKAK----------------------------------------------------------TPVSKPAKQ

Query:  SLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKEPLQKVSST-----------------------HAPLKLRLEIATILSGFEKIHADGLTPLEEYLN
        SLR SALL+ IR+ KMTVGGK IGSPP K D CPKEPLQKV S                        + P +LR EI T+LSG EKIHADGLTPLEEYLN
Subjt:  SLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKEPLQKVSST-----------------------HAPLKLRLEIATILSGFEKIHADGLTPLEEYLN

Query:  NYLKRVDNFNDVQSSYSSQLLSIDKAR
        +YLKRVDNFNDV+SSYS+QLLS DKAR
Subjt:  NYLKRVDNFNDVQSSYSSQLLSIDKAR

TYK29708.1 hypothetical protein E5676_scaffold3607G00180 [Cucumis melo var. makuwa]7.41e-5357.98Show/hide
Query:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKAK----------------------TPVSKPAKQSLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKE
        +AATLEEE KE KDESDSSKSD HWK+ LKKAK                      TPVSKP +Q LR SALLE I R KMTVGGK IGSPPSKGD CP+E
Subjt:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKAK----------------------TPVSKPAKQSLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKE

Query:  PLQKVSSTHAPLKLR---LEIAT-----------------ILSGFEKIHADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR
        PLQKVS T+APLK     L+ +                  + + F+K    GLT LEEYLN+YLKRVDNFNDVQSSYS+QLLS DKAR
Subjt:  PLQKVSSTHAPLKLR---LEIAT-----------------ILSGFEKIHADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR

TrEMBL top hitse value%identityAlignment
A0A5D3BT42 Putative mitochondrial protein1.2e-4553.57Show/hide
Query:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKA---------------------KTPVSKPAKQSLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKEP
        MAATLEEE  E K++SDSSKSD HWKRLLKKA                     KTPVS+PA+QSLR SAL E I RGKMTVGGKDIGSP SKGD  PK P
Subjt:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKA---------------------KTPVSKPAKQSLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKEP

Query:  LQKVSSTHAPL---------------------------------------------------------KLRLEIATILSGFEKIHADGLTPLEEYLNNYL
        LQK+SSTHAPL                                                         +LR +IAT+LSG EKIHADGLTPLEEYLN+YL
Subjt:  LQKVSSTHAPL---------------------------------------------------------KLRLEIATILSGFEKIHADGLTPLEEYLNNYL

Query:  KRVDNFNDVQSSYSSQLLSIDKAR
        KRVDNFNDVQSSYS +LLSIDK R
Subjt:  KRVDNFNDVQSSYSSQLLSIDKAR

A0A5D3BV87 Uncharacterized protein2.3e-4149.17Show/hide
Query:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKA----------------------------------------------------------KTPVSKPAKQ
        M+ATLEEE  E KDESD+SKSDRHWKR LKKA                                                          KT VSKPA+Q
Subjt:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKA----------------------------------------------------------KTPVSKPAKQ

Query:  SLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKEPLQKVSSTHAP------------------------------------LKLRLEIATILSGFEKI
        SLRSS LL+ I R KMTVGGKDIGSPPSKGD  PKEPLQKV+ +  P                                     +LR EIAT+LSG EKI
Subjt:  SLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKEPLQKVSSTHAP------------------------------------LKLRLEIATILSGFEKI

Query:  HADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR
        HADGLTPLEEYLN+YLKRVDNFN+VQSSYS+QLLSIDKAR
Subjt:  HADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR

A0A5D3BZM5 Putative mitochondrial protein1.2e-4551.88Show/hide
Query:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKA------------------------------------KTPVSKPAKQSLRSSALLEVIRRGKMTVGGKD
        MAATL+EE  E KDESDSSKSD HWKR LKKA                                    KTPVSKPA+QSLR SAL E IRR KMT+GGK 
Subjt:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKA------------------------------------KTPVSKPAKQSLRSSALLEVIRRGKMTVGGKD

Query:  IGSPPSKGDVCPKEPLQKVSSTHAPLK---------------------------------------------------------LRLEIATILSGFEKIH
        IGSPPSKGD CPKEPLQKVSS HA LK                                                         LR EIA +LSG EKIH
Subjt:  IGSPPSKGDVCPKEPLQKVSSTHAPLK---------------------------------------------------------LRLEIATILSGFEKIH

Query:  ADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR
        ADGLTPLEEYLN+YLKRVDNFNDVQSSYS+QLLSIDKAR
Subjt:  ADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR

A0A5D3C3D7 PMD domain-containing protein1.3e-4149.79Show/hide
Query:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKA--------------------------------------KTPVSKPAKQSLRSSALLEVIRRGKMTVGG
        MA  LEEE KE KDESDSSKSDRHWKR LKKA                                      KTPV+KPA+QSLR SAL E IRRGKMTVGG
Subjt:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKA--------------------------------------KTPVSKPAKQSLRSSALLEVIRRGKMTVGG

Query:  KDIGSPPSKGDVCPKEPLQKVSSTHAPLK---------------------------------------------------------LRLEIATILSGFEK
        KD+ S  SK  VCPK  L KVSSTHAPLK                                                         LR EIAT+LSG EK
Subjt:  KDIGSPPSKGDVCPKEPLQKVSSTHAPLK---------------------------------------------------------LRLEIATILSGFEK

Query:  IHADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR
        IHADGLT LEEYLN+YLKRVDNFNDVQSSYS+QLLS DKAR
Subjt:  IHADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR

A0A5D3D2A0 PMD domain-containing protein6.0e-4247.24Show/hide
Query:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKA---------------------------------------------------KTPVSKPAKQSLRSSAL
        MAATLEEE  E KDE+DSSKSDRHWKR LKKA                                                   KTPVSKP +QSLR S L
Subjt:  MAATLEEETKEDKDESDSSKSDRHWKRLLKKA---------------------------------------------------KTPVSKPAKQSLRSSAL

Query:  LEVIRRGKMTVGGKDIGSPPSKGDVCPKEPLQKVSSTHAPLK---------------------------------------------------------L
        LE IRR KM V GK I +PPSKGD CP+E LQKVSSTHAPLK                                                         L
Subjt:  LEVIRRGKMTVGGKDIGSPPSKGDVCPKEPLQKVSSTHAPLK---------------------------------------------------------L

Query:  RLEIATILSGFEKIHADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR
        RLEIAT+LSG EKIHADGLTPLEEYLN+YLKRVDNFNDVQSSYS+QLLS DK +
Subjt:  RLEIATILSGFEKIHADGLTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTACTCTCGAAGAGGAGACAAAGGAGGATAAAGATGAGAGCGATAGTAGCAAAAGTGATCGTCATTGGAAGAGACTTTTGAAGAAAGCAAAGACTCCCGTCTC
TAAACCAGCCAAACAGTCCTTACGTTCATCTGCTCTTCTCGAGGTGATTCGTCGAGGCAAGATGACAGTGGGAGGAAAAGACATTGGGAGTCCTCCATCCAAAGGAGATG
TCTGTCCTAAAGAACCCTTACAGAAGGTCAGCTCGACACATGCTCCCCTTAAACTTAGGCTAGAAATAGCAACAATTCTTTCGGGGTTTGAAAAGATCCATGCAGATGGC
TTGACTCCTCTTGAAGAGTATCTAAATAATTATCTTAAGAGGGTAGACAATTTCAACGATGTGCAATCTTCATATTCTTCACAGTTGTTGTCAATAGATAAGGCTCGTTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTACTCTCGAAGAGGAGACAAAGGAGGATAAAGATGAGAGCGATAGTAGCAAAAGTGATCGTCATTGGAAGAGACTTTTGAAGAAAGCAAAGACTCCCGTCTC
TAAACCAGCCAAACAGTCCTTACGTTCATCTGCTCTTCTCGAGGTGATTCGTCGAGGCAAGATGACAGTGGGAGGAAAAGACATTGGGAGTCCTCCATCCAAAGGAGATG
TCTGTCCTAAAGAACCCTTACAGAAGGTCAGCTCGACACATGCTCCCCTTAAACTTAGGCTAGAAATAGCAACAATTCTTTCGGGGTTTGAAAAGATCCATGCAGATGGC
TTGACTCCTCTTGAAGAGTATCTAAATAATTATCTTAAGAGGGTAGACAATTTCAACGATGTGCAATCTTCATATTCTTCACAGTTGTTGTCAATAGATAAGGCTCGTTA
A
Protein sequenceShow/hide protein sequence
MAATLEEETKEDKDESDSSKSDRHWKRLLKKAKTPVSKPAKQSLRSSALLEVIRRGKMTVGGKDIGSPPSKGDVCPKEPLQKVSSTHAPLKLRLEIATILSGFEKIHADG
LTPLEEYLNNYLKRVDNFNDVQSSYSSQLLSIDKAR