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IVF0014788 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014788
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr02:18471116..18471411
RNA-Seq ExpressionIVF0014788
SyntenyIVF0014788
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]8.21e-3167.71Show/hide
Query:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVH-----------QYQEDMEITKGSKKSTRVEGNVDDAVDFEVPI
        MKEERISIPHLSETFK GELLFDT+QRKR NED EI I VV +NT LPHPLVH           + ++ +++TKGS+K+TRVEG+VDDAVDFEVPI
Subjt:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVH-----------QYQEDMEITKGSKKSTRVEGNVDDAVDFEVPI

KAA0043020.1 uncharacterized protein E6C27_scaffold75G00990 [Cucumis melo var. makuwa]8.37e-3269.79Show/hide
Query:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPI
        MKEERISIPHL ETFKP ELLFDTNQRKRRNED EISI VV +NT L HPLVHQ            ++ +E+TKGS+KSTRVEG+VDD VDF+VPI
Subjt:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPI

KAA0052108.1 uncharacterized protein E6C27_scaffold578G00960 [Cucumis melo var. makuwa]5.54e-3171.88Show/hide
Query:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPI
        MKEERISIPHLSETFKP ELLFDT+QRKRR  D EISIVVV +NTILPHPLVHQ            ++ +E+TKGS  STRVEG+VDDAVDFEVPI
Subjt:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPI

KAA0059731.1 uncharacterized protein E6C27_scaffold551G00070 [Cucumis melo var. makuwa]7.13e-3378.82Show/hide
Query:  TFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPIKY
        T KPGELLFDTNQRKRRNEDFEISI VVFKNTILPHPLVHQ            ++ +EITKGSKKSTRVEGNVDDAVDFEVPIKY
Subjt:  TFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPIKY

TYK09461.1 uncharacterized protein E5676_scaffold499G00540 [Cucumis melo var. makuwa]2.36e-4883.67Show/hide
Query:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPIKY
        MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ            ++ +EITKGSKKSTRVEGNVDDAVDFEVPIKY
Subjt:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPIKY

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase6.1e-2667.71Show/hide
Query:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVH-----------QYQEDMEITKGSKKSTRVEGNVDDAVDFEVPI
        MKEERISIPHLSETFK GELLFDT+QRKR NED EI I VV +NT LPHPLVH           + ++ +++TKGS+K+TRVEG+VDDAVDFEVPI
Subjt:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVH-----------QYQEDMEITKGSKKSTRVEGNVDDAVDFEVPI

A0A5A7TI68 Uncharacterized protein1.2e-2669.79Show/hide
Query:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPI
        MKEERISIPHL ETFKP ELLFDTNQRKRRNED EISI VV +NT L HPLVHQ            ++ +E+TKGS+KSTRVEG+VDD VDF+VPI
Subjt:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPI

A0A5A7UA36 Reverse transcriptase domain-containing protein4.7e-2671.88Show/hide
Query:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPI
        MKEERISIPHLSETFKP ELLFDT+QRKRR  D EISIVVV +NTILPHPLVHQ            ++ +E+TKGS  STRVEG+VDDAVDFEVPI
Subjt:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPI

A0A5A7V1X3 Uncharacterized protein4.2e-2778.82Show/hide
Query:  TFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPIKY
        T KPGELLFDTNQRKRRNEDFEISI VVFKNTILPHPLVHQ            ++ +EITKGSKKSTRVEGNVDDAVDFEVPIKY
Subjt:  TFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPIKY

A0A5D3CCB3 Uncharacterized protein3.8e-3683.67Show/hide
Query:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPIKY
        MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ            ++ +EITKGSKKSTRVEGNVDDAVDFEVPIKY
Subjt:  MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQ-----------YQEDMEITKGSKKSTRVEGNVDDAVDFEVPIKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGGAAAGAATAAGCATACCTCATTTATCTGAAACATTTAAGCCTGGAGAATTGTTGTTTGATACCAACCAGAGAAAAAGACGTAACGAAGATTTTGAGATCTC
AATTGTAGTTGTCTTCAAGAATACTATTCTGCCTCATCCTTTGGTTCACCAGTATCAAGAAGACATGGAAATCACTAAGGGATCGAAAAAGAGCACCAGAGTAGAAGGTA
ACGTTGATGACGCTGTTGATTTCGAAGTTCCAATTAAATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAGGAAAGAATAAGCATACCTCATTTATCTGAAACATTTAAGCCTGGAGAATTGTTGTTTGATACCAACCAGAGAAAAAGACGTAACGAAGATTTTGAGATCTC
AATTGTAGTTGTCTTCAAGAATACTATTCTGCCTCATCCTTTGGTTCACCAGTATCAAGAAGACATGGAAATCACTAAGGGATCGAAAAAGAGCACCAGAGTAGAAGGTA
ACGTTGATGACGCTGTTGATTTCGAAGTTCCAATTAAATATTGA
Protein sequenceShow/hide protein sequence
MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQYQEDMEITKGSKKSTRVEGNVDDAVDFEVPIKY