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IVF0014838 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014838
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription factor HBP-1b(C38)-like
Genome locationchr12:3974599..3977679
RNA-Seq ExpressionIVF0014838
SyntenyIVF0014838
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037416.1 hypothetical protein E6C27_scaffold278G001280 [Cucumis melo var. makuwa]2.54e-2757.28Show/hide
Query:  VLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSY
        VLPTHKN+ +SEKIV +GY DVF  V+ YVGKTES EA PT EQH + NAS DV+ PD VD +         NTS + +FGDET GV N S D  F +SY
Subjt:  VLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSY

Query:  RSV
         SV
Subjt:  RSV

KAA0055548.1 hypothetical protein E6C27_scaffold222G00210 [Cucumis melo var. makuwa]1.71e-3557.66Show/hide
Query:  HKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSYRSVE
        HKNVG+SEKIV +GY D+F GV ++VGK+E  EAF T +QHG+ NAS DV+  DV+D + I       NTSP+ +FGDE T +G +S D  F+DSYRS+ 
Subjt:  HKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSYRSVE

Query:  NDIFRRFCASY
        ND FRRFCASY
Subjt:  NDIFRRFCASY

KAA0060536.1 hypothetical protein E6C27_scaffold22G003970 [Cucumis melo var. makuwa]3.83e-2758.65Show/hide
Query:  HKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSYRSVE
        HKNVG+SE IV +GY DVF  V   V K+ES EAF T EQHGI NAS DV+ PD V+           NTS +VVFG+ETTGVG +S D  F DSYRSV 
Subjt:  HKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSYRSVE

Query:  NDIF
        ND F
Subjt:  NDIF

KAA0063199.1 hypothetical protein E6C27_scaffold205G00060 [Cucumis melo var. makuwa]2.25e-2156.38Show/hide
Query:  GVLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLD
        GVLPTHK       IVE+GY D+FCGV  YVGKTES+EAFPT EQHGI NA  DV+ PD  D +         NTSPN V+ D T GV N + D
Subjt:  GVLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLD

KAA0067048.1 hypothetical protein E6C27_scaffold38G00950 [Cucumis melo var. makuwa]3.32e-2960Show/hide
Query:  GVLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADS
        GVL THKN+ +S+KIV EGYVDVFCGV  YV K ES EAF T EQHG+ NAS     PD VD +        GNT P+ +FGD+TTG+GNTS D FFA+S
Subjt:  GVLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADS

TrEMBL top hitse value%identityAlignment
A0A5A7T5J5 Uncharacterized protein2.1e-2057.28Show/hide
Query:  VLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSY
        VLPTHKN+ +SEKIV +GY DVF  V+ YVGKTES EA PT EQH + NAS DV+ PD VD +         NTS + +FGDET GV N S D  F +SY
Subjt:  VLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSY

Query:  RSV
         SV
Subjt:  RSV

A0A5A7UKH4 Uncharacterized protein1.1e-2657.66Show/hide
Query:  HKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSYRSVE
        HKNVG+SEKIV +GY D+F GV ++VGK+E  EAF T +QHG+ NAS DV+  DV+D + I       NTSP+ +FGDE T +G +S D  F+DSYRS+ 
Subjt:  HKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSYRSVE

Query:  NDIFRRFCASY
        ND FRRFCASY
Subjt:  NDIFRRFCASY

A0A5A7V224 Uncharacterized protein4.7e-2058.65Show/hide
Query:  HKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSYRSVE
        HKNVG+SE IV +GY DVF  V   V K+ES EAF T EQHGI NAS DV+ PD V+           NTS +VVFG+ETTGVG +S D  F DSYRSV 
Subjt:  HKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSYRSVE

Query:  NDIF
        ND F
Subjt:  NDIF

A0A5A7VC74 Uncharacterized protein6.3e-1756.38Show/hide
Query:  GVLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLD
        GVLPTH       KIVE+GY D+FCGV  YVGKTES+EAFPT EQHGI NA  DV+ PD  D +         NTSPN V+ D T GV N + D
Subjt:  GVLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLD

A0A5D3DSF9 Uncharacterized protein1.1e-2160Show/hide
Query:  GVLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADS
        GVL THKN+ +S+KIV EGYVDVFCGV  YV K ES EAF T EQHG+ NAS     PD VD +        GNT P+ +FGD+TTG+GNTS D FFA+S
Subjt:  GVLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTACTCCCAACGCACAAAAACGTCGGAAAAAGTGAAAAAATCGTCGAGGAAGGATATGTTGACGTTTTTTGCGGTGTCAAGACCTACGTTGGGAAAACTGAGTC
GAGAGAGGCATTCCCGACGAGTGAACAACACGGCATCGAGAATGCCTCTCTCGACGTCATGTGTCCTGATGTCGTCGACAGCCTTAGTATAAAAAGTTGGGTCGTTACAG
GAAATACCTCTCCCAATGTTGTTTTTGGCGATGAAACCACCGGCGTTGGGAATACCTCTCTCGACTTCTTTTTTGCCGACTCATATCGTAGCGTCGAAAATGATATCTTC
CGACGTTTTTGTGCATCCTATTGCCGACGTTTTGTTGCATCGAAAATTTCTTTTTATATGTATTTTTTTAAAACATGTAATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTACTCCCAACGCACAAAAACGTCGGAAAAAGTGAAAAAATCGTCGAGGAAGGATATGTTGACGTTTTTTGCGGTGTCAAGACCTACGTTGGGAAAACTGAGTC
GAGAGAGGCATTCCCGACGAGTGAACAACACGGCATCGAGAATGCCTCTCTCGACGTCATGTGTCCTGATGTCGTCGACAGCCTTAGTATAAAAAGTTGGGTCGTTACAG
GAAATACCTCTCCCAATGTTGTTTTTGGCGATGAAACCACCGGCGTTGGGAATACCTCTCTCGACTTCTTTTTTGCCGACTCATATCGTAGCGTCGAAAATGATATCTTC
CGACGTTTTTGTGCATCCTATTGCCGACGTTTTGTTGCATCGAAAATTTCTTTTTATATGTATTTTTTTAAAACATGTAATTTTTAA
Protein sequenceShow/hide protein sequence
MGVLPTHKNVGKSEKIVEEGYVDVFCGVKTYVGKTESREAFPTSEQHGIENASLDVMCPDVVDSLSIKSWVVTGNTSPNVVFGDETTGVGNTSLDFFFADSYRSVENDIF
RRFCASYCRRFVASKISFYMYFFKTCNF