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IVF0014849 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014849
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationtig00195367:562560..563794
RNA-Seq ExpressionIVF0014849
SyntenyIVF0014849
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437786.1 PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo]9.13e-39100Show/hide
Query:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
Subjt:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

XP_011650635.1 protein transport protein Sec61 subunit beta [Cucumis sativus]9.40e-39100Show/hide
Query:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
Subjt:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

XP_022146520.1 protein transport protein Sec61 subunit beta-like [Momordica charantia]1.33e-3898.65Show/hide
Query:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

XP_022950482.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata]1.33e-3898.65Show/hide
Query:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

XP_038875187.1 protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida]2.28e-3898.65Show/hide
Query:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

TrEMBL top hitse value%identityAlignment
A0A0A0L6Y8 Protein transport protein Sec61 subunit beta4.6e-29100Show/hide
Query:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
Subjt:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

A0A1S3AUY8 Protein transport protein Sec61 subunit beta4.6e-29100Show/hide
Query:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
Subjt:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

A0A5D3DB05 Protein transport protein Sec61 subunit beta4.6e-29100Show/hide
Query:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
Subjt:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

A0A6J1EFZ9 Protein transport protein Sec61 subunit beta6.0e-2998.65Show/hide
Query:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

A0A6J1IH25 Protein transport protein Sec61 subunit beta6.0e-2998.65Show/hide
Query:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA
        QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  QRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta9.7e-0849.28Show/hide
Query:  SQRGSAAATASMRRRRTTSSGTSG--GAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK
        S      A  ++RRR    SG SG   A    + FYTDD PG K+SP VV+ MS+ FIAFV +LHV+GK
Subjt:  SQRGSAAATASMRRRRTTSSGTSG--GAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK

P38389 Protein transport protein Sec61 subunit beta5.1e-2585.33Show/hide
Query:  QRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        QRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  QRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

P60467 Protein transport protein Sec61 subunit beta4.1e-0646.27Show/hide
Query:  AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK
        AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VLVMS+ FIA V +LH+ GK
Subjt:  AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK

P60468 Protein transport protein Sec61 subunit beta4.1e-0646.27Show/hide
Query:  AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK
        AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VLVMS+ FIA V +LH+ GK
Subjt:  AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK

Q9HFC7 Protein transport protein Sec61 subunit beta1.1e-0649.18Show/hide
Query:  ATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKL
        A AS R   T S G +GG++ TML+ YTD++ GLK+ P VV+V+S+GFI  V  LH++ K+
Subjt:  ATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKL

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein3.6e-2685.33Show/hide
Query:  QRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        QRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  QRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein3.6e-2685.33Show/hide
Query:  QRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        QRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  QRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein3.6e-2685.33Show/hide
Query:  QRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        QRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  QRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein3.6e-2685.33Show/hide
Query:  QRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        QRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  QRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR

AT3G60540.1 Preprotein translocase Sec, Sec61-beta subunit protein5.2e-2584.72Show/hide
Query:  QRGSAAATASMRRRRTT-SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR
        QRGSAAATASMRRR+    S ++GG AGTMLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Subjt:  QRGSAAATASMRRRRTT-SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATATTTGATTCAGAAGTGCTCAACAAGGGATGTCTCCCGTTCCCGATATCAATTGTCAGCTTGAAAGTTTCTAAATTTTCATTCTCTTTGTCGATACAGAATGG
CTTTAGGTGGAGGTCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGAACAACAAGTTCTGGTACATCTGGAGGTGCAGCTGGAACAATGCTGCAGT
TTTACACGGATGATGCTCCTGGACTCAAGATATCCCCCAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCGTTCTCCATGTTATGGGTAAGCTGTAC
TTCGTGCGAAGAGAAGCCTAG
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATTTTTTTTTTCATACGATTTGGTAAATTAGGGTTTCCTAACCATTCTAATTTTTTTCATACGATTT
GGTCGTTGTCGTGGTCGTCAGATCTGGATTCATTCTATTTTATTTTTTGCTAATTATCAGTTCGAGTAAATTATATTATTTGCGCCTCTTGAGAATGTTCGTTTATACAT
ATGCTTTGTTTTCCATCTCGATTTTCTTTTGCGAAACAGATCTCCCTCTTTACTCAAAACTAATTACCCTCCCCCTTTCCTCCTTGTTTTTGTTCAGTTTGGCGCTAATC
TGTGGTGGCTGTTATAAAAAATTAGGGCTCCAAATTGTTTCTTCTGTTGTTAATTTATCGGTCGATTATATGTTTTAATTTACAAACTCTAACTTTTAGGGAGTGTTTGA
GGCCTCGCGCATTTTCTGGTTCGAGGCCTTGGGGAAGTCTAGGATCTAATAGTTTTTTTTCTTCAAGAACAAAATCGTTAATTTAGCTTCTGATTCCATGCATAGTTTGG
TACCTTGCGTTCTAATTTTCTTTGAAACTATTGATCTGAATCAGTTCCGAGTCTGTCAACATTTAATCTCAATTCATGCAGTATGGCCTACCAATTGGTTTAATTACGCA
GTACCTAGTTTTAGGGGTTCAAAGTTCATTCTTTCGTATGTCGAGAGAATCCATATTCATGTTAACGAACATTTGCACGGATTTTTGGAGTTCTAGGTAGATCAAAGTTC
ATTGTTTCGTGTGATGGAGATTGTCTTGTTAGATAATGAAGTTTTGATAACCTGATTTGAGAAAGGTCAGGGAAGGAATGGAAGGTTTGGAGGTTAACATTCCTTCCTAC
CTACATGTTCATATTTGATTCAGAAGTGCTCAACAAGGGATGTCTCCCGTTCCCGATATCAATTGTCAGCTTGAAAGTTTCTAAATTTTCATTCTCTTTGTCGATACAGA
ATGGCTTTAGGTGGAGGTCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGAACAACAAGTTCTGGTACATCTGGAGGTGCAGCTGGAACAATGCTG
CAGTTTTACACGGATGATGCTCCTGGACTCAAGATATCCCCCAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCGTTCTCCATGTTATGGGTAAGCT
GTACTTCGTGCGAAGAGAAGCCTAG
Protein sequenceShow/hide protein sequence
MFIFDSEVLNKGCLPFPISIVSLKVSKFSFSLSIQNGFRWRSQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLY
FVRREA