; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0014856 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014856
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationchr03:23775036..23776379
RNA-Seq ExpressionIVF0014856
SyntenyIVF0014856
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445082.1 PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 [Cucumis melo]1.75e-12898.92Show/hide
Query:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ
        MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGV+AEETPDVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFF
        GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKAN IVHKLWIEQPENIPTCLATKPYPKSVVSPFF
Subjt:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFF

XP_011649759.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucumis sativus]1.07e-12194.24Show/hide
Query:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETP-DVLIQYVVLRRDLIDSWPLGSVVT
        MTCVIS+SRFTLSISKSI LC CPRSRVFPSSS LSLHSSIRK+HPFCSASMSQS ETNSVSTPDDAG KAEETP DVLIQYVVLRRDLIDSWPLGSVVT
Subjt:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETP-DVLIQYVVLRRDLIDSWPLGSVVT

Query:  QGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
        QGCHASVSAIWL KDDPHTSDYCNP NIDSMHKVTLEVKGETQMVNLSEKLKAN IVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
Subjt:  QGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL

XP_023546189.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita pepo subsp. pepo]2.02e-9679.17Show/hide
Query:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ
        M  VIS+S FT SISKS  LC C RSRV+PSSS LSL S  R S+ F SASMS+SAE+NS   PDD     E+T DVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        GCHASVSA+WL KDDPHTS+YC+P NIDSMHKVTLEVKGETQ+VNLSEKLKA+ I HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKLCK
Subjt:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

XP_031736857.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucumis sativus]1.57e-12194.24Show/hide
Query:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETP-DVLIQYVVLRRDLIDSWPLGSVVT
        MTCVIS+SRFTLSISKSI LC CPRSRVFPSSS LSLHSSIRK+HPFCSASMSQS ETNSVSTPDDAG KAEETP DVLIQYVVLRRDLIDSWPLGSVVT
Subjt:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETP-DVLIQYVVLRRDLIDSWPLGSVVT

Query:  QGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
        QGCHASVSAIWL KDDPHTSDYCNP NIDSMHKVTLEVKGETQMVNLSEKLKAN IVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
Subjt:  QGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL

XP_038884124.1 putative peptidyl-tRNA hydrolase PTRHD1 [Benincasa hispida]2.34e-10784.9Show/hide
Query:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ
        MTCVIS+SRF  SISKS  LC C   RV PSSS LSL S  R S+PF SASMSQSAETNSV  PDD G KAEE  DVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        GCHASVSAIWL KDDPHTSDYC+P NIDSMHKVTLEVKGETQ+VNLSEKLKAN IVHKLWIEQPENIPTCLATKPYPKS+VSPFFKKLKLCK
Subjt:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

TrEMBL top hitse value%identityAlignment
A0A0A0LLQ2 Aminoacyl-tRNA hydrolase1.0e-9494.3Show/hide
Query:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETP-DVLIQYVVLRRDLIDSWPLGSVVT
        MTCVIS+SRFTLSISKSI LC CPRSRVFPSSS LSLHSSIRK+HPFCSASMSQS ETNSVSTPDDAG KAEETP DVLIQYVVLRRDLIDSWPLGSVVT
Subjt:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETP-DVLIQYVVLRRDLIDSWPLGSVVT

Query:  QGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        QGCHASVSAIWL KDDPHTSDYCNP NIDSMHKVTLEVKGETQMVNLSEKLKAN IVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
Subjt:  QGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A1S4DVS0 Aminoacyl-tRNA hydrolase2.0e-9898.92Show/hide
Query:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ
        MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGV+AEETPDVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFF
        GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKAN IVHKLWIEQPENIPTCLATKPYPKSVVSPFF
Subjt:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFF

A0A6J1HBR1 Aminoacyl-tRNA hydrolase7.8e-7478.65Show/hide
Query:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ
        M  VIS+SRFT SISKS  LC C RSRV+PSSS LSL S  R S+ F S SMS+SAE+NS   PDD+    E+T DVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        GCHASVSA+WL KDDPHT +YC+P NIDSMHKVTLEVKGETQ+VNLSEKL+AN I HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKLCK
Subjt:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A6J1K304 Aminoacyl-tRNA hydrolase2.3e-7379.17Show/hide
Query:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ
        M  VIS+SRFT SISKS  LC C RSRV+PSSS LSL S  R S+ F SASMS+SAE+NS   PDD     E+  DVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        GCHASVSAIWL KDDP TS+YC+P NIDSMHKVTLEVKGETQ+VNLSEKLK N I HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKLCK
Subjt:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase8.1e-7177.08Show/hide
Query:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ
        M  VIS+SRFT SIS S  L  C  +RV+  SS + L S    S  F SASMS+SAE+NSV   DD G KAEE  DVL+QYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        GCHASVSAIWL KDDPHTS+YC+P NIDSMHKVTLEVKGETQ+VNLSEKLKAN IVHKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKLCK
Subjt:  GCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD11.0e-2547.93Show/hide
Query:  PDVLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCL
        P +L+QY+VLR+DL     SWP G++V Q CHA+ +A+ L +D PHT+ Y     +  M KV LE   ET +  L+E L+   I H LW+EQPENI TC+
Subjt:  PDVLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCL

Query:  ATKPYPKSVVSPFFKKLKLCK
        A +PYPK  VS + KK +L K
Subjt:  ATKPYPKSVVSPFFKKLKLCK

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD11.1e-2750.41Show/hide
Query:  PDVLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCL
        P +L+QY+VLR+DL     SWP G+VV Q CHA+ +A+ L +D PHT+ Y     ++ M KV LE   ET +  L+E L+   I HKLW+EQPENIPTC+
Subjt:  PDVLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCL

Query:  ATKPYPKSVVSPFFKKLKLCK
        A +PYPK  VS + KK +L K
Subjt:  ATKPYPKSVVSPFFKKLKLCK

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD18.4e-2547.11Show/hide
Query:  PDVLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCL
        P VL+QY+VLR+DL     SWP G++V Q CHA+ +A+   +D PHT+ Y     +  M KV LE   ET +  L+E L+   I H LW+EQPENI TC+
Subjt:  PDVLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCL

Query:  ATKPYPKSVVSPFFKKLKLCK
        A +PYPK  V  + KK +L K
Subjt:  ATKPYPKSVVSPFFKKLKLCK

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein5.0e-5761.86Show/hide
Query:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSH--PFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVV
        M   + S+ F   I       P PR R +        HS+IR +H   F +AS S S +T  +    DA   AE+  DV++QYVVLRRDLIDSWPLGSVV
Subjt:  MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSH--PFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVV

Query:  TQGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        TQGCHASV+AIW  KDDP T  YC+P +IDSMHKVTLEVKGETQM+NLSEKLK   I HKLW+EQPENIPTC+ATKPYPKS VS FFKKLKLCK
Subjt:  TQGCHASVSAIWLTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTGTGTAATTTCATCTTCTCGATTCACACTCTCCATCTCCAAATCCATTGGCCTCTGCCCATGTCCAAGGTCTAGGGTTTTTCCATCTTCTTCTCCTCTTTCTCT
CCACTCTTCGATTCGGAAATCCCATCCATTTTGCTCCGCCTCCATGAGTCAATCCGCTGAAACTAATTCCGTTTCTACACCGGACGACGCCGGAGTAAAGGCGGAGGAGA
CACCCGACGTTTTGATTCAGTACGTGGTGCTTCGGAGAGATCTGATTGATTCCTGGCCGCTTGGTAGCGTCGTAACTCAGGGATGCCATGCTTCTGTCTCTGCCATTTGG
TTGACTAAAGATGATCCCCACACTTCCGACTACTGTAATCCAGATAATATCGATTCTATGCATAAGGTTACTCTTGAAGTGAAGGGAGAAACTCAAATGGTTAACTTATC
AGAGAAGCTCAAAGCAAACTTAATCGTTCATAAATTATGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCTACAAAACCCTACCCCAAATCTGTTGTATCACCAT
TTTTTAAAAAGCTAAAACTCTGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
CTCCTTTTTGTAAAATAAATCATTAATCATAAATTTTCAGGCCCATTAATAAAGGCCTGGATATTTAATAAAGGCCTGGACGCCAATAATATGGGCCTATGAATAGAATA
AGCCCATTATACAGGCCCAGTGTCCATATAAAATTCCCGTACAGCGAGTTTTACTTGAAATCTTTAGTTGGGTAGCACGGTTTGTTGTGCTACTTTGTGTGAAGATATCA
TGACTTGTGTAATTTCATCTTCTCGATTCACACTCTCCATCTCCAAATCCATTGGCCTCTGCCCATGTCCAAGGTCTAGGGTTTTTCCATCTTCTTCTCCTCTTTCTCTC
CACTCTTCGATTCGGAAATCCCATCCATTTTGCTCCGCCTCCATGAGTCAATCCGCTGAAACTAATTCCGTTTCTACACCGGACGACGCCGGAGTAAAGGCGGAGGAGAC
ACCCGACGTTTTGATTCAGTACGTGGTGCTTCGGAGAGATCTGATTGATTCCTGGCCGCTTGGTAGCGTCGTAACTCAGGGATGCCATGCTTCTGTCTCTGCCATTTGGT
TGACTAAAGATGATCCCCACACTTCCGACTACTGTAATCCAGATAATATCGATTCTATGCATAAGGTTACTCTTGAAGTGAAGGGAGAAACTCAAATGGTTAACTTATCA
GAGAAGCTCAAAGCAAACTTAATCGTTCATAAATTATGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCTACAAAACCCTACCCCAAATCTGTTGTATCACCATT
TTTTAAAAAGCTAAAACTCTGTAAGTGATGGAATATTGAATTGCAATGAATTGATGAATAATTCTGCCTTTACAACGTCCCACCCC
Protein sequenceShow/hide protein sequence
MTCVISSSRFTLSISKSIGLCPCPRSRVFPSSSPLSLHSSIRKSHPFCSASMSQSAETNSVSTPDDAGVKAEETPDVLIQYVVLRRDLIDSWPLGSVVTQGCHASVSAIW
LTKDDPHTSDYCNPDNIDSMHKVTLEVKGETQMVNLSEKLKANLIVHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK