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IVF0014873 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014873
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:10256436..10256603
RNA-Seq ExpressionIVF0014873
SyntenyIVF0014873
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025975.1 uncharacterized protein E6C27_scaffold34G002910 [Cucumis melo var. makuwa]1.34e-1793.18Show/hide
Query:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTL
        MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPM K +
Subjt:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTL

KAA0041782.1 uncharacterized protein E6C27_scaffold67G001450 [Cucumis melo var. makuwa]2.74e-0549.09Show/hide
Query:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTLRKACLIALLKE
        MAPRGR R+ RQV  DVP T S N  Q  DE+SSNP   +GK  ++  +  LL++
Subjt:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTLRKACLIALLKE

KAA0058518.1 uncharacterized protein E6C27_scaffold132G001120 [Cucumis melo var. makuwa]6.52e-0552.17Show/hide
Query:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTLRK
        + P+ R R+ RQV   VP TGSA R+Q  DE+SSNP +P+G+T +K
Subjt:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTLRK

TYK04211.1 uncharacterized protein E5676_scaffold24967G00130 [Cucumis melo var. makuwa]3.67e-2093.48Show/hide
Query:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTLRK
        MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKT+++
Subjt:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTLRK

TYK29193.1 uncharacterized protein E5676_scaffold880G00030 [Cucumis melo var. makuwa]3.55e-0661.9Show/hide
Query:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGK
        M PRGRPR+ RQV  DVPAT S NR Q   EMSSNP   +G+
Subjt:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGK

TrEMBL top hitse value%identityAlignment
A0A5A7SND8 Retrotrans_gag domain-containing protein2.9e-1393.18Show/hide
Query:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTL
        MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPM K +
Subjt:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTL

A0A5D3BWX9 Retrotrans_gag domain-containing protein3.1e-1593.48Show/hide
Query:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTLRK
        MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKT+++
Subjt:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTLRK

A0A5D3DZK7 Uncharacterized protein7.1e-0461.9Show/hide
Query:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGK
        M PRGRPR+ RQV  DVPAT S NR Q   EMSSNP   +G+
Subjt:  MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCACGAGGAAGGCCAAGGCGAGCTAGGCAAGTAGTAATAGATGTTCCAGCTACTGGGAGTGCTAATAGACTACAACGATTAGATGAGATGTCTAGTAACCCACC
TAACCCTATGGGCAAAACGTTAAGGAAAGCATGTTTAATCGCCTTGCTTAAAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACCACGAGGAAGGCCAAGGCGAGCTAGGCAAGTAGTAATAGATGTTCCAGCTACTGGGAGTGCTAATAGACTACAACGATTAGATGAGATGTCTAGTAACCCACC
TAACCCTATGGGCAAAACGTTAAGGAAAGCATGTTTAATCGCCTTGCTTAAAGAGTAG
Protein sequenceShow/hide protein sequence
MAPRGRPRRARQVVIDVPATGSANRLQRLDEMSSNPPNPMGKTLRKACLIALLKE