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IVF0014883 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014883
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr12:5885873..5886169
RNA-Seq ExpressionIVF0014883
SyntenyIVF0014883
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045193.1 hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa]7.51e-2050Show/hide
Query:  NTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS
        N   +NP  +AH+L+ PI  YASP+LY FN GI Y AFG N  F++K  ML+M Q   QFGG+  EDP DHI++ Y +C+SF++  +S
Subjt:  NTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS

KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]4.66e-69100Show/hide
Query:  MNNQNNPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS
        MNNQNNPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS
Subjt:  MNNQNNPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]4.00e-3867.33Show/hide
Query:  MNNQNN---PAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRI
        MNNQNN   PA Q  Q  NP YLA D D+PI+SYASPNLYDFNPGIAY  F EN  FEIK +ML + QNAGQF  HP +DP+D+IRNFY ICASF+M  I
Subjt:  MNNQNN---PAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRI

Query:  S
        S
Subjt:  S

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.33e-2857.58Show/hide
Query:  NQNN--PAYQNTQEQ-NPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS
        N+NN  P    TQ Q N   +AH+LD PI++Y S NLYDFN GIAYL FGEN  FE+K +ML M Q AGQF G+  EDP++HI++FY ICASF+M   S
Subjt:  NQNN--PAYQNTQEQ-NPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]6.18e-1953.16Show/hide
Query:  NPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNM
        NP  LAHD ++P++ YASPNLY+F PGI    F  N  FE+K +ML M Q AGQFGG   EDP+ H+++F  IC++F M
Subjt:  NPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNM

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein2.5e-1548.45Show/hide
Query:  NNQN----NPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNM
        +NQN    N    N   +NP  +AH+L+ PI  YASP+LY FN GI Y AFG N  F++K  ML+M Q   QFGG+  EDP DHI++ Y +C+SF++
Subjt:  NNQN----NPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNM

A0A5A7UDN8 Uncharacterized protein7.3e-52100Show/hide
Query:  MNNQNNPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS
        MNNQNNPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS
Subjt:  MNNQNNPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS

A0A5A7UFP5 Uncharacterized protein3.7e-1183.72Show/hide
Query:  MNNQNNPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGI
        MNNQNNPA+QN +EQN  YLAHDLDKPI+SYASPNLYDFN GI
Subjt:  MNNQNNPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGI

A0A5A7V2U7 Putative disease resistance RPP13-like protein 11.5e-2867.33Show/hide
Query:  MNNQNN---PAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRI
        MNNQNN   PA Q  Q  NP YLA D D+PI+SYASPNLYDFNPGIAY  F EN  FEIK +ML + QNAGQF  HP +DP+D+IRNFY ICASF+M  I
Subjt:  MNNQNN---PAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRI

Query:  S
        S
Subjt:  S

A0A5D3BVN1 Putative disease resistance RPP13-like protein 15.1e-2157Show/hide
Query:  NNQNN--PAYQNTQEQ-NPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS
        +N+NN  P    TQ Q N   +AH+LD PI++Y S NLYDFN GIAYL FGEN  FE+K +ML M Q AGQF G+  EDP++HI++FY ICASF+M   S
Subjt:  NNQNN--PAYQNTQEQ-NPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACCAGAACAACCCTGCCTACCAAAATACCCAAGAACAAAATCCTGCCTACTTGGCACATGACCTAGACAAACCTATAAAGTCTTATGCCTCACCAAATTTGTA
TGATTTTAACCCCGGGATCGCCTACCTAGCATTTGGTGAGAACGTCGGATTCGAAATCAAGCATCTTATGCTCTATATGACACAGAATGCGGGGCAATTTGGAGGACACC
CACACGAGGATCCATATGATCACATTCGCAACTTCTACTTTATCTGCGCCTCTTTCAATATGCTTAGGATATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAACCAGAACAACCCTGCCTACCAAAATACCCAAGAACAAAATCCTGCCTACTTGGCACATGACCTAGACAAACCTATAAAGTCTTATGCCTCACCAAATTTGTA
TGATTTTAACCCCGGGATCGCCTACCTAGCATTTGGTGAGAACGTCGGATTCGAAATCAAGCATCTTATGCTCTATATGACACAGAATGCGGGGCAATTTGGAGGACACC
CACACGAGGATCCATATGATCACATTCGCAACTTCTACTTTATCTGCGCCTCTTTCAATATGCTTAGGATATCGTGA
Protein sequenceShow/hide protein sequence
MNNQNNPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLMLYMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS