CuGenDBv2

Gene ID	IVF0014893
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	leukocyte receptor cluster member 1 homolog
Genome location	chr09:20907984..20909386
RNA-Seq Expression	IVF0014893
Synteny	IVF0014893
Gene Ontology terms	NA
InterPro domains	IPR019339 - CBF1-interacting co-repressor CIR, N-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039711.1 leukocyte receptor cluster member 1-like protein [Cucumis melo var. makuwa]

4.30e-135

94.95

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Query:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
        MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG

Query:  VEDGSKKKRMKKEE-----------KYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
        VEDGSKKKRMKKEE           KYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKEE-----------KYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE

Query:  RSRKSGIASREGDSSSRR
        RSRKSGIASREGDSSSRR
Subjt:  RSRKSGIASREGDSSSRR

XP_004152406.1 leukocyte receptor cluster member 1 homolog [Cucumis sativus]

8.83e-134

92.41

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Query:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
        MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQ RKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG

Query:  VEDGSKKKRMKKEE-----------KYKLGYGVAGKGVKMPWYLERPSKDD-TETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIA
        VEDGSKKKRMKKEE           KYKLGYGVAGKGVKMPWYLERP+KDD TETGENDGS RVG+GNVKKGEKKTLEELRAERLKREQKEKGRERALIA
Subjt:  VEDGSKKKRMKKEE-----------KYKLGYGVAGKGVKMPWYLERPSKDD-TETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIA

Query:  ERSRKSGIASREGDSSSRRWKSRR
        ERSRKSGIASREGD SSRRWKSRR
Subjt:  ERSRKSGIASREGDSSSRRWKSRR

XP_008437093.1 PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo]

3.94e-139

95.07

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Query:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
        MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG

Query:  VEDGSKKKRMKKEE-----------KYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
        VEDGSKKKRMKKEE           KYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKEE-----------KYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE

Query:  RSRKSGIASREGDSSSRRWKSRR
        RSRKSGIASREGDSSSRRWKSRR
Subjt:  RSRKSGIASREGDSSSRRWKSRR

XP_038874709.1 leukocyte receptor cluster member 1 homolog isoform X1 [Benincasa hispida]

6.25e-126

87.89

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Query:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLA VIDT+KPVETDLKPGHINLFEGIKIFDP+KGS+NGG
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG

Query:  VEDGSKKKRMKKEE-----------KYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
        VEDGSK+KRMKKEE           KYKLGYGVAGKGVK+PWYLERP KDD E+ ENDGSSRVG+GNVKKGEKKTLEELRAERLKREQKEKGRERALIA 
Subjt:  VEDGSKKKRMKKEE-----------KYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE

Query:  RSRKSGIASREGDSSSRRWKSRR
          RKSG ASREGDSSSRRWKSRR
Subjt:  RSRKSGIASREGDSSSRRWKSRR

XP_038874710.1 leukocyte receptor cluster member 1 homolog isoform X2 [Benincasa hispida]

5.72e-127

87.89

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Query:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLA VIDT+KPVETDLKPGHINLFEGIKIFDP+KGS+NGG
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG

Query:  VEDGSKKKRMKKEE-----------KYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
        VEDGSK+KRMKKEE           KYKLGYGVAGKGVK+PWYLERP KDD E+ ENDGSSRVG+GNVKKGEKKTLEELRAERLKREQKEKGRERALIA 
Subjt:  VEDGSKKKRMKKEE-----------KYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE

Query:  RSRKSGIASREGDSSSRRWKSRR
          RKSG ASREGDSSSRRWKSRR
Subjt:  RSRKSGIASREGDSSSRRWKSRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKV3 Cir_N domain-containing protein

7.5e-102

92.41

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Query:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
        MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQ RKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG

Query:  VEDGSKKKRMKKE-----------EKYKLGYGVAGKGVKMPWYLERPSK-DDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIA
        VEDGSKKKRMKKE           EKYKLGYGVAGKGVKMPWYLERP+K DDTETGENDGS RVG+GNVKKGEKKTLEELRAERLKREQKEKGRERALIA
Subjt:  VEDGSKKKRMKKE-----------EKYKLGYGVAGKGVKMPWYLERPSK-DDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIA

Query:  ERSRKSGIASREGDSSSRRWKSRR
        ERSRKSGIASREGD SSRRWKSRR
Subjt:  ERSRKSGIASREGDSSSRRWKSRR

A0A1S3AT65 leukocyte receptor cluster member 1 homolog

6.5e-106

95.07

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Query:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
        MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG

Query:  VEDGSKKKRMKKE-----------EKYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
        VEDGSKKKRMKKE           EKYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKE-----------EKYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE

Query:  RSRKSGIASREGDSSSRRWKSRR
        RSRKSGIASREGDSSSRRWKSRR
Subjt:  RSRKSGIASREGDSSSRRWKSRR

A0A5A7TDI4 Leukocyte receptor cluster member 1-like protein

6.8e-103

94.95

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Query:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
        MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG

Query:  VEDGSKKKRMKKE-----------EKYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
        VEDGSKKKRMKKE           EKYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKE-----------EKYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE

Query:  RSRKSGIASREGDSSSRR
        RSRKSGIASREGDSSSRR
Subjt:  RSRKSGIASREGDSSSRR

A0A6J1E3T1 leukocyte receptor cluster member 1 homolog

6.6e-90

82.51

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Query:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQ+RKRDAEFRLEQLRTARG+APVIDT+KPVETDLKPGH+NLFEGIKIFDP+K S+N G
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG

Query:  VEDGSKKKRMKKE-----------EKYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
         EDGSKKKRMK+E           EKYKLGYGVAGKGVK+PWYLER SKDD E+ +ND S RV + N+KKG KKTLEELRAERLKREQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKE-----------EKYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE

Query:  RSRKSGIASREGDSSSRRWKSRR
        RS KSG  SRE DSSSRRWKSRR
Subjt:  RSRKSGIASREGDSSSRRWKSRR

A0A6J1I3I0 leukocyte receptor cluster member 1 homolog

1.7e-90

83.86

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Query:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQ+RKRDAEFRLEQLRTARG+APVIDT+KPVETDLKPGH+NLFEGIKIFDP+K S+N G
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGG

Query:  VEDGSKKKRMKKE-----------EKYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE
         EDGSKKKRMKKE           EKYKLGYGVAGKGVK+PWYLER SKDD E+ +N  SSRV + NVKKG KKTLEELRAERLKREQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKE-----------EKYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAE

Query:  RSRKSGIASREGDSSSRRWKSRR
        RS KSG ASRE DSSSRRWKSRR
Subjt:  RSRKSGIASREGDSSSRRWKSRR

SwissProt top hits

e value

%identity

Alignment

Q9DB98 Leukocyte receptor cluster member 1 homolog

1.7e-05

26.72

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Query:  LNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLR---TARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVED
        +NILP+K W+V N +N  +V+RDE  A +EE+ +  +      E R E LR     R   P ++ + P       G ++LF   ++ +  KG   G  E 
Subjt:  LNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLR---TARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVED

Query:  GSKKKRMKKEEKYK------LGYGVAGKGVKMPWYLERPSKDD-----------------------------TETGENDGSSRVGNGNVKKGEKKTLEEL
          +K+R K+ ++        LG   A    + PWY   P + D                               + E+  S        +  E  +LE+L
Subjt:  GSKKKRMKKEEKYK------LGYGVAGKGVKMPWYLERPSKDD-----------------------------TETGENDGSSRVGNGNVKKGEKKTLEEL

Query:  RAERLKREQKEKGRERALIA----ERSRKSGIASREGDSSSRRWKSR
        RAERL+RE  E+ R  AL+A    + S++  + + E D   RR+ S+
Subjt:  RAERLKREQKEKGRERALIA----ERSRKSGIASREGDSSSRRWKSR

Arabidopsis top hits

e value

%identity

Alignment

AT2G03010.1 Family of unknown function (DUF577)

2.0e-06

34.48

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Query:  VKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEKYKLGYGVAGK
        V++DEEAAA+EEQ+KRE ARKRDAE RLE LR  RGLAP+                                 GG E                  GV  K
Subjt:  VKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEKYKLGYGVAGK

Query:  GVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSRKSGIASR
                 R  ++D+  GE D     G G  +  +KK   +   + LKRE+ EK RERAL  ++S+++G  SR
Subjt:  GVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSRKSGIASR

AT4G16530.1 Family of unknown function (DUF577)

9.5e-49

50.4

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Query:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVE-------------------------TD
        MGGHGGLNILPQKRWNVYN++NREKV+++EEAAA+EEQ+KRE+ARKRDAE RLE LR  RGLAP+   S   E                          +
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVE-------------------------TD

Query:  LKPGHINLFEGIKIFDP--IKGSDNGGVEDGSKKKRMKK---------------------EEKYKLGYGVAGKGVKMPWYLE-RPSKDDTETGENDGSSR
         K GHINLFEGI+IFDP  IK +D    E+  ++K+M+K                     EEKY+LGYGVAGKGVK PWYLE R  ++D+  GE+D    
Subjt:  LKPGHINLFEGIKIFDP--IKGSDNGGVEDGSKKKRMKK---------------------EEKYKLGYGVAGKGVKMPWYLE-RPSKDDTETGENDGSSR

Query:  VGNGNVKK--GEKKTLEELRAERLKREQKEKGRERALIAERSRKSGIASR
         G    KK    KK+L+ELR ERLKRE+ EK RERAL  ++S+++G  SR
Subjt:  VGNGNVKK--GEKKTLEELRAERLKREQKEKGRERALIAERSRKSGIASR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGTTGGAATGTTTACAACTACGAAAACAGAGAGAAAGTGAAGCGAGACGAAGAAGCTGCAGCTAAAGAAGA
ACAGCTTAAACGTGAGCAGGCTAGGAAACGAGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACCGCACGGGGTTTAGCTCCAGTAATCGACACTTCAAAGCCAGTAGAAA
CAGACCTAAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAATTAAGGGTTCAGACAATGGGGGAGTGGAAGATGGGTCTAAGAAGAAGAGGATG
AAGAAGGAAGAAAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAAATGCCATGGTACCTTGAGAGGCCCAGCAAGGATGACACGGAGACTGGCGAAAATGA
TGGATCGTCGAGAGTAGGGAATGGAAATGTAAAGAAGGGAGAAAAAAAGACATTGGAAGAATTGAGGGCTGAGCGTCTGAAACGAGAGCAGAAGGAGAAGGGAAGGGAGC
GTGCTTTAATCGCAGAGAGAAGCCGGAAGAGTGGAATAGCTTCAAGGGAAGGAGATTCATCTTCCAGGAGGTGGAAATCCAGAAGATAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRM
KKEEKYKLGYGVAGKGVKMPWYLERPSKDDTETGENDGSSRVGNGNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSRKSGIASREGDSSSRRWKSRR

IVF0014893 (gene) of Melon (IVF77) v1 genome