; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0014917 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014917
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNascent polypeptide-associated complex subunit beta
Genome locationchr10:18563198..18563443
RNA-Seq ExpressionIVF0014917
SyntenyIVF0014917
Gene Ontology termsGO:0005829 - cytosol (cellular component)
GO:0005854 - nascent polypeptide-associated complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042788 - polysomal ribosome (cellular component)
InterPro domainsIPR002715 - Nascent polypeptide-associated complex NAC domain
IPR038187 - NAC A/B domain superfamily
IPR039370 - Transcription factor BTF3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS30166.1 basic transcription factor 3 [Actinidia rufa]4.69e-2485Show/hide
Query:  NHLTISLDNRKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEG
        N+ T +L+ RKKKAVHKTTTTDDKRLQSTLKR GVNAIPAIEEVNIFKDDVVIQF NP+G
Subjt:  NHLTISLDNRKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEG

GFS30168.1 basic transcription factor 3 [Actinidia rufa]4.20e-2394.12Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEG
        RKKKAVHKTTTTDDKRLQSTLKR GVNAIPAIEEVNIFKDDVVIQF NP+G
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEG

GFZ05932.1 basic transcription factor 3 [Actinidia rufa]4.08e-2394.12Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEG
        RKKKAVHKTTTTDDKRLQSTLKR GVNAIPAIEEVNIFKDDVVIQF NP+G
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEG

KAA3479189.1 basic transcription factor 3-like isoform X1 [Gossypium australe]1.70e-2390.74Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEGKFS
        RKKKAVHKTTTTDDKRLQSTLKR GVNAIPAIEEVNIFKDDVVIQF NP+G++S
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEGKFS

KDO59689.1 hypothetical protein CISIN_1g031135mg [Citrus sinensis]5.33e-2483.61Show/hide
Query:  LTISLDNRKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEGKFS
        LT++L++RKKKAVHKTTTTDDKRLQSTLKR GVNAIPAIEEVNIFKDDVVIQF NP+ + S
Subjt:  LTISLDNRKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEGKFS

TrEMBL top hitse value%identityAlignment
A0A067EX46 Nascent polypeptide-associated complex subunit beta7.5e-1887.72Show/hide
Query:  LTISLDNRKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE
        LT++L++RKKKAVHKTTTTDDKRLQSTLKR GVNAIPAIEEVNIFKDDVVIQF NP+
Subjt:  LTISLDNRKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE

A0A1U8LKG0 Nascent polypeptide-associated complex subunit beta3.7e-1790.57Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEGKF
        RKKKAVHKTTTTDDKRLQSTLKR GVNAIPAIEEVNIFKDDVVIQF NP+G++
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEGKF

A0A5B6WBT8 Nascent polypeptide-associated complex subunit beta9.7e-1890.74Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEGKFS
        RKKKAVHKTTTTDDKRLQSTLKR GVNAIPAIEEVNIFKDDVVIQF NP+G++S
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEGKFS

A0A6A4L083 Nascent polypeptide-associated complex subunit beta (Fragment)4.8e-1781.67Show/hide
Query:  FNHLTISLDNRKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE
        +N+  + L+ RKKKAVHKTTTTDDKRLQSTLKR GVNAIPAIEEVNIFKDDVVIQF NP+
Subjt:  FNHLTISLDNRKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE

A0A7J0DAV5 Nascent polypeptide-associated complex subunit beta4.4e-1885Show/hide
Query:  NHLTISLDNRKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEG
        N+ T +L+ RKKKAVHKTTTTDDKRLQSTLKR GVNAIPAIEEVNIFKDDVVIQF NP+G
Subjt:  NHLTISLDNRKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEG

SwissProt top hitse value%identityAlignment
Q2KIY7 Transcription factor BTF3 homolog 44.2e-1064.71Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDD-VVIQFNNPE
        RKKK VH+T T DDK+LQS+LK+  VN I  IEEVN+ KDD  VI FNNP+
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDD-VVIQFNNPE

Q5ZJG3 Transcription factor BTF3 homolog 44.2e-1064.71Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDD-VVIQFNNPE
        RKKK VH+T T DDK+LQS+LK+  VN I  IEEVN+ KDD  VI FNNP+
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDD-VVIQFNNPE

Q96K17 Transcription factor BTF3 homolog 44.2e-1064.71Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDD-VVIQFNNPE
        RKKK VH+T T DDK+LQS+LK+  VN I  IEEVN+ KDD  VI FNNP+
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDD-VVIQFNNPE

Q9CAT7 Nascent polypeptide-associated complex subunit beta3.2e-1892Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE
        RKKKAVHKTTTTDDKRLQSTLKR GVN+IPAIEEVNIFKDDVVIQF NP+
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE

Q9SMW7 Basic transcription factor 31.6e-1790Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE
        RKKKAVHKT TTDDKRLQSTLKR GVN+IPAIEEVNIFKDDVVIQF NP+
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE

Arabidopsis top hitse value%identityAlignment
AT1G17880.1 basic transcription factor 31.1e-1890Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE
        RKKKAVHKT TTDDKRLQSTLKR GVN+IPAIEEVNIFKDDVVIQF NP+
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE

AT1G73230.1 Nascent polypeptide-associated complex NAC2.3e-1992Show/hide
Query:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE
        RKKKAVHKTTTTDDKRLQSTLKR GVN+IPAIEEVNIFKDDVVIQF NP+
Subjt:  RKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTTGATTTTATCATTCCAAGTTCCATCATTCCAAATAATGTTGCATTTAACCATTTAACAATTTCCCTTGACAATAGAAAGAAGAAGGCAGTTCATAAGACCAC
CACAACTGATGACAAAAGGCTCCAGAGTACCTTAAAGAGAACTGGGGTGAATGCTATTCCTGCTATTGAGGAGGTCAACATTTTCAAGGATGATGTGGTTATCCAATTCA
ACAACCCAGAGGGAAAATTTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATTTTGATTTTATCATTCCAAGTTCCATCATTCCAAATAATGTTGCATTTAACCATTTAACAATTTCCCTTGACAATAGAAAGAAGAAGGCAGTTCATAAGACCAC
CACAACTGATGACAAAAGGCTCCAGAGTACCTTAAAGAGAACTGGGGTGAATGCTATTCCTGCTATTGAGGAGGTCAACATTTTCAAGGATGATGTGGTTATCCAATTCA
ACAACCCAGAGGGAAAATTTTCTTAG
Protein sequenceShow/hide protein sequence
MYFDFIIPSSIIPNNVAFNHLTISLDNRKKKAVHKTTTTDDKRLQSTLKRTGVNAIPAIEEVNIFKDDVVIQFNNPEGKFS