; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0014918 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014918
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr10:7350348..7350536
RNA-Seq ExpressionIVF0014918
SyntenyIVF0014918
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041105.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.00e-2788.71Show/hide
Query:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV
        MADITA+AAM EMERKINFLMK VEERDHEIT LREQ+RTRETAESSQTP+VKAT+KGKNVV
Subjt:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV

KAA0048603.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.21e-2895.16Show/hide
Query:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV
        MADITAEAAMAEMERKINFLMK VEERDHEIT LREQMRTRETAESSQTPVVKAT+KGKNVV
Subjt:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV

KAA0051584.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.70e-27100Show/hide
Query:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNV
        MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNV
Subjt:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNV

KAA0065606.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.67e-2793.44Show/hide
Query:  ADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV
        ADI AEA MAEMERKINFLMK VEERDHEITTLREQ+RTRETAESSQTPVVKATNKGKNVV
Subjt:  ADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV

TYK22865.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.24e-2790.32Show/hide
Query:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV
        MADIT EAAMAEM+RKINFLMK VEERDHEIT LREQMRTRETAESSQTP+VKAT+KGKNVV
Subjt:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV

TrEMBL top hitse value%identityAlignment
A0A5A7T9K9 Ty3-gypsy retrotransposon protein2.7e-2093.55Show/hide
Query:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV
        MADITAEAAMAEMERKINFLMKA EERDHEIT LREQMRTRET ESSQTPVVKAT+KGKNVV
Subjt:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV

A0A5A7TYE9 Ty3-gypsy retrotransposon protein9.4e-2195.16Show/hide
Query:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV
        MADITAEAAMAEMERKINFLMK VEERDHEIT LREQMRTRETAESSQTPVVKAT+KGKNVV
Subjt:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV

A0A5A7U8E4 Retrotransposon gag protein6.5e-22100Show/hide
Query:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNV
        MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNV
Subjt:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNV

A0A5A7UF60 Ty3-gypsy retrotransposon protein2.1e-2093.55Show/hide
Query:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV
        MADIT EAAMAEME+KINFLMKAVEERDHEIT LREQMRTRETAESSQTPVVKAT+KGKNVV
Subjt:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV

A0A5A7VDN4 Ty3-gypsy retrotransposon protein3.2e-2196.77Show/hide
Query:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV
        MADITAEAAMAEMERKINFLMKAVEERDHEIT LREQMRTRETAESSQTPVVKAT+KGKNVV
Subjt:  MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATATAACGGCCGAAGCTGCCATGGCAGAGATGGAGAGGAAAATTAACTTCCTGATGAAAGCTGTGGAGGAACGAGACCATGAAATCACAACTTTGAGGGAGCA
AATGAGGACTCGTGAAACTGCTGAGTCAAGTCAAACTCCTGTTGTCAAAGCTACTAATAAAGGAAAGAATGTGGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATATAACGGCCGAAGCTGCCATGGCAGAGATGGAGAGGAAAATTAACTTCCTGATGAAAGCTGTGGAGGAACGAGACCATGAAATCACAACTTTGAGGGAGCA
AATGAGGACTCGTGAAACTGCTGAGTCAAGTCAAACTCCTGTTGTCAAAGCTACTAATAAAGGAAAGAATGTGGTATAG
Protein sequenceShow/hide protein sequence
MADITAEAAMAEMERKINFLMKAVEERDHEITTLREQMRTRETAESSQTPVVKATNKGKNVV