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IVF0014984 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0014984
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationchr01:15462827..15463188
RNA-Seq ExpressionIVF0014984
SyntenyIVF0014984
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]1.39e-0539.19Show/hide
Query:  NLRVTTIPKG-----------KQFVIQIIYLNQPCFQDFL----------------TFHRRDDIFADLISHLNE
        N  V+ +PKG           K+F+I I YLN+PCFQ+ L                T H RDDIFA+ ISH+N+
Subjt:  NLRVTTIPKG-----------KQFVIQIIYLNQPCFQDFL----------------TFHRRDDIFADLISHLNE

KAE8645661.1 hypothetical protein Csa_020412 [Cucumis sativus]9.76e-0950Show/hide
Query:  RVTTIPKG-----------KQFVIQIIYLNQPCFQDFL----------------TFHRRDDIFADLISHLNEHL
        RV+ +PKG           K+FVI I YLNQPCFQD L                TFH  DDIFADLISHLNE L
Subjt:  RVTTIPKG-----------KQFVIQIIYLNQPCFQDFL----------------TFHRRDDIFADLISHLNEHL

KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]1.24e-0439.08Show/hide
Query:  MGLRRLRRWSSMNGNLRVTTIPKG-----------KQFVIQIIYLNQPCFQDFL----------------TFHRRDDIFADLISHLN
        M L +L R  S +    VT +PKG           K+FVI + YLNQPCFQD L                T   R+DIF +LIS LN
Subjt:  MGLRRLRRWSSMNGNLRVTTIPKG-----------KQFVIQIIYLNQPCFQDFL----------------TFHRRDDIFADLISHLN

PON93770.1 Small auxin-up RNA [Trema orientale]1.64e-0441.1Show/hide
Query:  RRLRRWSSMNGNLRVTTI----PKG------------KQFVIQIIYLNQPCFQDFLTFHRRDDIFADLISHLN
        ++L R SS NG+   +T+    PKG             +FVI + YLNQP FQ+ LT   R++ F +LISHLN
Subjt:  RRLRRWSSMNGNLRVTTI----PKG------------KQFVIQIIYLNQPCFQDFLTFHRRDDIFADLISHLN

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]2.16e-0742.05Show/hide
Query:  MGLRRLRRWSSMNGNLRVTTIPKG-----------KQFVIQIIYLNQPCFQDFL----------------TFHRRDDIFADLISHLNE
        MGLR+L     +  N  V+ +PKG           K+FVI I YLNQPCFQ+ L                T H RDDIF DLIS LN+
Subjt:  MGLRRLRRWSSMNGNLRVTTIPKG-----------KQFVIQIIYLNQPCFQDFL----------------TFHRRDDIFADLISHLNE

TrEMBL top hitse value%identityAlignment
A0A0A0K5V1 Uncharacterized protein3.6e-1355.56Show/hide
Query:  MGLRRLRRWSSMNGNLRVTTIPKG-----------KQFVIQIIYLNQPCFQDF----------------LTFHRRDDIFADLISHLNEHL
        MGLRRL R SSMNGN RV+ +PKG           K+FVI I YLNQPCFQD                 LTFH  DDIFADLISHLNE L
Subjt:  MGLRRLRRWSSMNGNLRVTTIPKG-----------KQFVIQIIYLNQPCFQDF----------------LTFHRRDDIFADLISHLNEHL

A0A6J1C4W2 auxin-responsive protein SAUR24-like1.4e-0442.05Show/hide
Query:  MGLRRLRRWSSMNGNLRVTTIPKG-----------KQFVIQIIYLNQPCFQDF----------------LTFHRRDDIFADLISHLNE
        MGLR+L     +  N  V+ +PKG           K+FVI I YLNQPCFQ+                 LT H RDDIF DLIS LN+
Subjt:  MGLRRLRRWSSMNGNLRVTTIPKG-----------KQFVIQIIYLNQPCFQDF----------------LTFHRRDDIFADLISHLNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTTCGTCGTCTTAGAAGATGGTCTTCAATGAATGGAAACCTGAGAGTTACAACGATTCCTAAGGGGAAACAGTTCGTGATTCAGATTATTTACTTGAACCAACC
TTGTTTTCAAGACTTTCTCACATTTCACCGTAGAGATGATATATTTGCTGATTTGATCTCTCACTTGAATGAACATCTACGAGTGTTAATACCAACAAAATTATGGAGTA
CAGTTTTGATCTTGGAAAATAGGCATGATATATTTCATTATGAATTCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTTCGTCGTCTTAGAAGATGGTCTTCAATGAATGGAAACCTGAGAGTTACAACGATTCCTAAGGGGAAACAGTTCGTGATTCAGATTATTTACTTGAACCAACC
TTGTTTTCAAGACTTTCTCACATTTCACCGTAGAGATGATATATTTGCTGATTTGATCTCTCACTTGAATGAACATCTACGAGTGTTAATACCAACAAAATTATGGAGTA
CAGTTTTGATCTTGGAAAATAGGCATGATATATTTCATTATGAATTCCATTAA
Protein sequenceShow/hide protein sequence
MGLRRLRRWSSMNGNLRVTTIPKGKQFVIQIIYLNQPCFQDFLTFHRRDDIFADLISHLNEHLRVLIPTKLWSTVLILENRHDIFHYEFH