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IVF0015032 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015032
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr06:22061842..22062503
RNA-Seq ExpressionIVF0015032
SyntenyIVF0015032
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]2.12e-10782.81Show/hide
Query:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE
        MPPAITLDNILY+WRICTRRN LS+LYLP  SLEP KH+TQRFTDWWTT+H TYFEDNR+HLVS+VIPPPSQP+LPKNRGSNLGGKEIRLVEA+AP LEE
Subjt:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE

Query:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE
        EV EHKDES+S K+D HWKR LKKAKVS D+PDGRGLSAL VPDVP LSPLNDHLEGLIE  SD+SL GPHAVDS FE+VGT +TPVNKP E
Subjt:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE

KAA0048379.1 hypothetical protein E6C27_scaffold264G00980 [Cucumis melo var. makuwa]5.44e-10982.29Show/hide
Query:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE
        MPPAITLDNILY+ RICTR N LS+LYLP   LEPYKH+TQRFTDWWTT+H TYFEDNR+HLVS+ IPPPSQP+LPKNRGSNLGGKEIRLVEA+ P LEE
Subjt:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE

Query:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE
        EV EHKDES+S K+D HWKRHLKKAKVSSD+PDGRGLSAL VPDVP LSPLNDHLEGLIE  SD+SL GPHAVDS FE+VGT KTPVNKP E
Subjt:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE

KAA0054204.1 hypothetical protein E6C27_scaffold131G001410 [Cucumis melo var. makuwa]3.83e-10479.69Show/hide
Query:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE
        MPPAI L+NILY+WRICTRRN LS+LYLP HSLEP KH+TQRF DWWTT+H TYFEDNR+HLVS+VIPPPSQP+LPKNRGSNLGGKEIRLVEA+ P LEE
Subjt:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE

Query:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE
        EV EHKDES++ K+D H KR LKKAKVS D+PDGRGLSAL VPDVP LSPLNDHLEG IE  SD+SL GP+AVDS FE+VGT KTPVNKP E
Subjt:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE

KAA0055866.1 hypothetical protein E6C27_scaffold104G00440 [Cucumis melo var. makuwa]1.93e-109100Show/hide
Query:  MTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEEEVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLS
        MTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEEEVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLS
Subjt:  MTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEEEVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLS

Query:  ALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE
        ALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE
Subjt:  ALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE

TYK16513.1 hypothetical protein E5676_scaffold21G003220 [Cucumis melo var. makuwa]2.34e-10680.42Show/hide
Query:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE
        MPPAITL+NILY+WRICTRRN LS+LYL   SLEP KH+TQ+FT+WWTTRH TYFEDNR+HL+S+ IPPPSQPKLPKNRGSNLGGK+IRLVE + P LEE
Subjt:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE

Query:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNK
        EV EHKDES+S K+D HWKR LKKAKVS DNPDGRGLSALGVPDVP LSPLN+HLEGLIELGSD+ L GPH VDS FE+VGT KTPVNK
Subjt:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNK

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein2.1e-8782.81Show/hide
Query:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE
        MPPAITLDNILY+WRICTRRN LS+LYLP  SLEP KH+TQRFTDWWTT+H TYFEDNR+HLVS+VIPPPSQP+LPKNRGSNLGGKEIRLVEA+AP LEE
Subjt:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE

Query:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE
        EV EHKDES+S K+D HWKR LKKAKVS D+PDGRGLSAL VPDVP LSPLNDHLEGLIE  SD+SL GPHAVDS FE+VGT +TPVNKP E
Subjt:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE

A0A5A7TFC8 PMD domain-containing protein9.8e-8581.77Show/hide
Query:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE
        MPPAITLDNILY+WRICTRRN L +LYLP  SLEP KH+TQRFTDWWTT+H TYFEDNR+HLVS+VIPPPSQP+LPKNRGSNLGGKEIRLVEA+AP LEE
Subjt:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE

Query:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE
        EV EH  ES+S K+DHHWKR LKKAKVS D+P+GRGLSAL VPDVP LSPLNDHLEGLIE  SD+SL GPHAVDS FE+VGT KTPVNKP E
Subjt:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE

A0A5A7TX42 Uncharacterized protein3.7e-8480.73Show/hide
Query:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE
        M PAITLDNILY+WRICTRRN LS+LYLP  SLEP KH+TQRFTDWWTT+H TYFEDNR+HLVS+ IPP SQP+LPKNRGSNLGGKEIRLVEA+AP LEE
Subjt:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE

Query:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE
        EV E KDES+S K+D HWKR LKKAKVS D+PDGRGLSAL VPDVP LSPLNDHLEGLIE  SD+SL GPHAVDS FE+VGT +TPVNKP E
Subjt:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE

A0A5A7U4K9 Uncharacterized protein2.3e-8682.29Show/hide
Query:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE
        MPPAITLDNILY+ RICTR N LS+LYLP   LEPYKH+TQRFTDWWTT+H TYFEDNR+HLVS+ IPPPSQP+LPKNRGSNLGGKEIRLVEA+ P LEE
Subjt:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE

Query:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE
        EV EHKDES+S K+D HWKRHLKKAKVSSD+PDGRGLSAL VPDVP LSPLNDHLEGLIE  SD+SL GPHAVDS FE+VGT KTPVNKP E
Subjt:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE

A0A5D3D7V4 PMD domain-containing protein9.8e-8581.77Show/hide
Query:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE
        MPPAITLDNILY+WRICTRRN L +LYLP  SLEP KH+TQRFTDWWTT+H TYFEDNR+HLVS+VIPPPSQP+LPKNRGSNLGGKEIRLVEA+AP LEE
Subjt:  MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEE

Query:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE
        EV EH  ES+S K+DHHWKR LKKAKVS D+P+GRGLSAL VPDVP LSPLNDHLEGLIE  SD+SL GPHAVDS FE+VGT KTPVNKP E
Subjt:  EVNEHKDESNSRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCTGCGATCACACTGGATAATATATTATATTACTGGAGAATATGTACGAGGCGTAACAATTTATCTCAGCTATACTTGCCCGTCCATTCGCTAGAGCCTTACAA
GCATATGACGCAACGATTTACAGACTGGTGGACCACGAGGCACGAGACCTATTTTGAGGATAATAGATACCATTTAGTGAGTAATGTCATTCCTCCCCCTTCACAGCCCA
AACTACCCAAGAACCGAGGGAGCAACCTGGGTGGTAAAGAAATTCGCTTGGTTGAGGCGATAGCTCCTACTCTTGAGGAGGAGGTAAATGAGCATAAAGATGAGAGCAAT
AGCAGAAAAAATGATCATCATTGGAAGAGACATTTGAAGAAAGCGAAGGTATCAAGTGATAATCCCGACGGAAGGGGTTTAAGTGCTTTGGGAGTCCCTGATGTTCCACT
ACTGTCACCCTTGAACGATCATCTTGAAGGACTTATAGAGCTAGGTAGTGATAAATCTTTGATGGGACCTCACGCAGTTGATTCGACCTTTGAGAAAGTTGGTACCTTGA
AAACTCCCGTCAATAAACCAGACGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCACCTGCGATCACACTGGATAATATATTATATTACTGGAGAATATGTACGAGGCGTAACAATTTATCTCAGCTATACTTGCCCGTCCATTCGCTAGAGCCTTACAA
GCATATGACGCAACGATTTACAGACTGGTGGACCACGAGGCACGAGACCTATTTTGAGGATAATAGATACCATTTAGTGAGTAATGTCATTCCTCCCCCTTCACAGCCCA
AACTACCCAAGAACCGAGGGAGCAACCTGGGTGGTAAAGAAATTCGCTTGGTTGAGGCGATAGCTCCTACTCTTGAGGAGGAGGTAAATGAGCATAAAGATGAGAGCAAT
AGCAGAAAAAATGATCATCATTGGAAGAGACATTTGAAGAAAGCGAAGGTATCAAGTGATAATCCCGACGGAAGGGGTTTAAGTGCTTTGGGAGTCCCTGATGTTCCACT
ACTGTCACCCTTGAACGATCATCTTGAAGGACTTATAGAGCTAGGTAGTGATAAATCTTTGATGGGACCTCACGCAGTTGATTCGACCTTTGAGAAAGTTGGTACCTTGA
AAACTCCCGTCAATAAACCAGACGAATAG
Protein sequenceShow/hide protein sequence
MPPAITLDNILYYWRICTRRNNLSQLYLPVHSLEPYKHMTQRFTDWWTTRHETYFEDNRYHLVSNVIPPPSQPKLPKNRGSNLGGKEIRLVEAIAPTLEEEVNEHKDESN
SRKNDHHWKRHLKKAKVSSDNPDGRGLSALGVPDVPLLSPLNDHLEGLIELGSDKSLMGPHAVDSTFEKVGTLKTPVNKPDE