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IVF0015044 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015044
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionactivating signal cointegrator 1 complex subunit 1
Genome locationchr05:5286905..5287556
RNA-Seq ExpressionIVF0015044
SyntenyIVF0015044
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033771.1 activating signal cointegrator 1 complex subunit 1 [Cucumis melo var. makuwa]7.30e-5583.93Show/hide
Query:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE
        MTGK EFKSAADQNKKRKTI QAWRPVCTHACSSE        VES+DGSQVQEMDC MHSS AS QPVEVVEEINVVTELSVNV GDTNLEGQ VPSGE
Subjt:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE

Query:  KFSVKLYVSQHI
        KFSVKL VS+HI
Subjt:  KFSVKLYVSQHI

KAA0059318.1 activating signal cointegrator 1 complex subunit 1 [Cucumis melo var. makuwa]6.39e-5285.71Show/hide
Query:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE
        MTGKTEFKSAADQ KKRKTISQAWRPVCTHACSSE        VESEDGSQVQEMDCRMHSSTAS QPVEVVEEINVVTELSVNVGGDTNLEGQ VPSGE
Subjt:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE

Query:  KFSVKLYVSQHI
        KFSVKL V   +
Subjt:  KFSVKLYVSQHI

XP_004141755.1 activating signal cointegrator 1 complex subunit 1 isoform X2 [Cucumis sativus]1.54e-4478.57Show/hide
Query:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE
        MTGKTEF+SAADQ KKRKTISQAWRPVCTHAC SE        VESEDGSQVQEMD RMH+ST S QPVEV EEINVVTELSVN+GGDTNLEGQ V SGE
Subjt:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE

Query:  KFSVKLYVSQHI
        KFSVKL V   +
Subjt:  KFSVKLYVSQHI

XP_008462176.1 PREDICTED: activating signal cointegrator 1 complex subunit 1 [Cucumis melo]3.32e-5285.71Show/hide
Query:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE
        MTGKTEFKSAADQ KKRKTISQAWRPVCTHACSSE        VESEDGSQVQEMDCRMHSSTAS QPVEVVEEINVVTELSVNVGGDTNLEGQ VPSGE
Subjt:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE

Query:  KFSVKLYVSQHI
        KFSVKL V   +
Subjt:  KFSVKLYVSQHI

XP_031745175.1 activating signal cointegrator 1 complex subunit 1 isoform X3 [Cucumis sativus]2.34e-4476.52Show/hide
Query:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE-----------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVP
        MTGKTEF+SAADQ KKRKTISQAWRPVCTHAC SE           VESEDGSQVQEMD RMH+ST S QPVEV EEINVVTELSVN+GGDTNLEGQ V 
Subjt:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE-----------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVP

Query:  SGEKFSVKLYVSQHI
        SGEKFSVKL V   +
Subjt:  SGEKFSVKLYVSQHI

TrEMBL top hitse value%identityAlignment
A0A0A0K963 KH domain-containing protein5.4e-3678.57Show/hide
Query:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE
        MTGKTEF+SAADQ KKRKTISQAWRPVCTHAC SE        VESEDGSQVQEMD RMH+ST S QPVEV EEINVVTELSVN+GGDTNLEGQ V SGE
Subjt:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE

Query:  KFSVKLYVSQHI
        KFSVKL V   +
Subjt:  KFSVKLYVSQHI

A0A1S3CGC2 activating signal cointegrator 1 complex subunit 13.8e-4285.71Show/hide
Query:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE
        MTGKTEFKSAADQ KKRKTISQAWRPVCTHACSSE        VESEDGSQVQEMDCRMHSSTAS QPVEVVEEINVVTELSVNVGGDTNLEGQ VPSGE
Subjt:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE

Query:  KFSVKLYVSQHI
        KFSVKL V   +
Subjt:  KFSVKLYVSQHI

A0A5D3C0W5 Activating signal cointegrator 1 complex subunit 13.8e-4285.71Show/hide
Query:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE
        MTGKTEFKSAADQ KKRKTISQAWRPVCTHACSSE        VESEDGSQVQEMDCRMHSSTAS QPVEVVEEINVVTELSVNVGGDTNLEGQ VPSGE
Subjt:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE

Query:  KFSVKLYVSQHI
        KFSVKL V   +
Subjt:  KFSVKLYVSQHI

A0A5D3DFJ4 Activating signal cointegrator 1 complex subunit 11.2e-4083.93Show/hide
Query:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE
        MTGK EFKSAADQNKKRKTI QAWRPVCTHACSSE        VES+DGSQVQEMDC MHSS AS QPVEVVEEINVVTELSVNV GDTNLEGQ VPSGE
Subjt:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGE

Query:  KFSVKLYVSQHI
        KFSVKL VS+HI
Subjt:  KFSVKLYVSQHI

A0A6J1GQ24 uncharacterized protein LOC111456441 isoform X14.7e-2463.03Show/hide
Query:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQ-PVEVVEEINVVTELSV------NVGGDTNLEG
        M GK EF+  ADQ KKRKTI+QAWRPVCT A  SE        VESEDGS+VQE    +H+ST S Q  VEV EEINVVT+LSV      N GGDTNLEG
Subjt:  MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSE--------VESEDGSQVQEMDCRMHSSTASPQ-PVEVVEEINVVTELSV------NVGGDTNLEG

Query:  QFVPSGEKFSVKLYVSQHI
        Q VPSGEKFSVKL V   +
Subjt:  QFVPSGEKFSVKLYVSQHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGGTAAAACGGAATTTAAGAGTGCTGCTGACCAGAATAAAAAGCGCAAAACAATCAGCCAAGCATGGAGACCAGTGTGTACCCACGCTTGTTCTTCTGAGGTTGA
GTCAGAGGATGGAAGTCAAGTTCAAGAAATGGACTGCAGAATGCATTCCAGTACAGCTAGTCCTCAACCAGTAGAAGTAGTTGAAGAAATTAATGTCGTGACTGAGCTAA
GTGTAAATGTTGGTGGAGACACGAACTTGGAGGGTCAATTTGTGCCTTCTGGTGAGAAGTTTTCAGTGAAACTATATGTAAGTCAGCATATCCGATTAAATGAACTGTTA
TCAAATATAGTCAATCGAGACTTCCTGTCAATTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGGTAAAACGGAATTTAAGAGTGCTGCTGACCAGAATAAAAAGCGCAAAACAATCAGCCAAGCATGGAGACCAGTGTGTACCCACGCTTGTTCTTCTGAGGTTGA
GTCAGAGGATGGAAGTCAAGTTCAAGAAATGGACTGCAGAATGCATTCCAGTACAGCTAGTCCTCAACCAGTAGAAGTAGTTGAAGAAATTAATGTCGTGACTGAGCTAA
GTGTAAATGTTGGTGGAGACACGAACTTGGAGGGTCAATTTGTGCCTTCTGGTGAGAAGTTTTCAGTGAAACTATATGTAAGTCAGCATATCCGATTAAATGAACTGTTA
TCAAATATAGTCAATCGAGACTTCCTGTCAATTGATTGA
Protein sequenceShow/hide protein sequence
MTGKTEFKSAADQNKKRKTISQAWRPVCTHACSSEVESEDGSQVQEMDCRMHSSTASPQPVEVVEEINVVTELSVNVGGDTNLEGQFVPSGEKFSVKLYVSQHIRLNELL
SNIVNRDFLSID