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IVF0015050 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015050
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr03:4115483..4116085
RNA-Seq ExpressionIVF0015050
SyntenyIVF0015050
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.45e-3648.54Show/hide
Query:  KVQEAVEAWKVVRRIKSLRHCEGTINQYNIWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRW------------
        K+ EAVEAWK V+++KSLRHCEGT  QY+ WRA+R+G+ +    +SL PN   +  HD +EK+LK+LRE N V+ATENE LREEVK+W            
Subjt:  KVQEAVEAWKVVRRIKSLRHCEGTINQYNIWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRW------------

Query:  ------LELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIR--KLKHELERVNKVAVDFQSAL
              LELEK+ DSLN EAIQ+RKKNKRLL++IA L  + EA+K  I    L+H ++      ++ +  L
Subjt:  ------LELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIR--KLKHELERVNKVAVDFQSAL

KAA0049964.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]8.07e-2651.61Show/hide
Query:  IWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRWLELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVC
        +WRA R+ VE  IA QSLDPNNVF INHDDQEKDLK+LRE N VLA ENEGLREEVK+W++             Q+ +  + L + +             
Subjt:  IWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRWLELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVC

Query:  IRKLKHELERVNKVAVDFQSALDQ
              ELERV+KVAVDFQSALD+
Subjt:  IRKLKHELERVNKVAVDFQSALDQ

KAA0054930.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.35e-3366.96Show/hide
Query:  RATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRWLELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIR
        +  RS   +    ++ +   +  INHDDQEKDLKQLRERNQVLATENEGLREEVKRW                IRKKNKRLLKDIATLDNKAEAQKVCIR
Subjt:  RATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRWLELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIR

Query:  KLKHELERVNKV
        KLKHELERVNKV
Subjt:  KLKHELERVNKV

KGN65327.1 hypothetical protein Csa_019964 [Cucumis sativus]8.75e-3165.69Show/hide
Query:  VLATENEGLREEVKRWL---------------------ELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIRKLKHELERVNKVAVDFQSAL
        VLATENEGLR+EVKRW+                     ELEKDM+SLNIEAIQIRKKNKRLL+DIAT+ ++AEAQKVCIR+LK ELERV+KV +DFQSAL
Subjt:  VLATENEGLREEVKRWL---------------------ELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIRKLKHELERVNKVAVDFQSAL

Query:  DQ
        D+
Subjt:  DQ

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]7.01e-3648.54Show/hide
Query:  KVQEAVEAWKVVRRIKSLRHCEGTINQYNIWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRW------------
        K+ EAVEAWK V+++KSLRHCEGT  QY+ WRA+R+G+ +    +SL PN   +  HD +EK+LK+LRE N V+ATENE LREEVK+W            
Subjt:  KVQEAVEAWKVVRRIKSLRHCEGTINQYNIWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRW------------

Query:  ------LELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIR--KLKHELERVNKVAVDFQSAL
              LELEK+ DSLN EAIQ+RKKNKRLL++IA L  + EA+K  I    L+H ++      ++ +  L
Subjt:  ------LELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIR--KLKHELERVNKVAVDFQSAL

TrEMBL top hitse value%identityAlignment
A0A0A0LWU7 Uncharacterized protein1.2e-2364.42Show/hide
Query:  NQVLATENEGLREEVKRWL---------------------ELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIRKLKHELERVNKVAVDFQS
        + VLATENEGLR+EVKRW+                     ELEKDM+SLNIEAIQIRKKNKRLL+DIAT+ ++AEAQKVCIR+LK ELERV+KV +DFQS
Subjt:  NQVLATENEGLREEVKRWL---------------------ELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIRKLKHELERVNKVAVDFQS

Query:  ALDQ
        ALD+
Subjt:  ALDQ

A0A5A7SNY0 Glial fibrillary acidic protein-like2.0e-3148.54Show/hide
Query:  KVQEAVEAWKVVRRIKSLRHCEGTINQYNIWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRW------------
        K+ EAVEAWK V+++KSLRHCEGT  QY+ WRA+R+G+ +    +SL PN   +  H D+EK+LK+LRE N V+ATENE LREEVK+W            
Subjt:  KVQEAVEAWKVVRRIKSLRHCEGTINQYNIWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRW------------

Query:  ------LELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVC--IRKLKHELERVNKVAVDFQSAL
              LELEK+ DSLN EAIQ+RKKNKRLL++IA L  + EA+K    I  L+H ++      ++ +  L
Subjt:  ------LELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVC--IRKLKHELERVNKVAVDFQSAL

A0A5A7SUT0 Reverse transcriptase6.1e-2036.56Show/hide
Query:  KVQEAVEAWKVVRRIKSLRHCEGTINQYNIWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRWLE----------
        K+ EAVEAWK V+++KSLRHCEGT  QY+ WRA+R+G+ +    +SL PN   +  H D+EK+LK+LRE N VLATENE LREEVK+W++          
Subjt:  KVQEAVEAWKVVRRIKSLRHCEGTINQYNIWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRWLE----------

Query:  ---------------LEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIRKLKHE--------LERVNKVAVDFQSALDQ
                       L+  ++    + I+   KN  L K +    N +E+Q +  RK +          +E+  ++++DF    D+
Subjt:  ---------------LEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIRKLKHE--------LERVNKVAVDFQSALDQ

A0A5D3D0S2 Glial fibrillary acidic protein-like2.0e-3148.54Show/hide
Query:  KVQEAVEAWKVVRRIKSLRHCEGTINQYNIWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRW------------
        K+ EAVEAWK V+++KSLRHCEGT  QY+ WRA+R+G+ +    +SL PN   +  H D+EK+LK+LRE N V+ATENE LREEVK+W            
Subjt:  KVQEAVEAWKVVRRIKSLRHCEGTINQYNIWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENEGLREEVKRW------------

Query:  ------LELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVC--IRKLKHELERVNKVAVDFQSAL
              LELEK+ DSLN EAIQ+RKKNKRLL++IA L  + EA+K    I  L+H ++      ++ +  L
Subjt:  ------LELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVC--IRKLKHELERVNKVAVDFQSAL

A0A5D3DHF5 Glial fibrillary acidic protein-like6.7e-2782.02Show/hide
Query:  INHDDQEKDLKQLRERNQVLATENEGLREEVKRWLELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIRKLKHELERVNKV
        INHDDQEKDLKQLRERNQVLATENEGLREEVKRW                IRKKNKRLLKDIATLDNKAEAQKVCIRKLKHELERVNKV
Subjt:  INHDDQEKDLKQLRERNQVLATENEGLREEVKRWLELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIRKLKHELERVNKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAAACAATTTGCACCAGTCATCTATGGGTTGGAAGATTTGGGATTTCTCTTACGAGGCTGATAAGACAGGTCAAGGTGCAAGAAGCAGTAGAAGCATGG
AAGGTTGTAAGAAGAATAAAGAGTCTACGACATTGCGAGGGTACTATAAATCAGTACAACATTTGGAGAGCTACTAGAAGTGGGGTTGAACTAGTTATTGCCCCA
CAATCTTTGGATCCCAACAATGTTTTTAGAATAAATCATGATGATCAAGAAAAGGACTTGAAACAGTTGAGAGAGAGGAACCAGGTCCTAGCAACGGAGAATGAG
GGGCTGAGGGAAGAAGTCAAACGATGGTTAGAGTTGGAGAAGGACATGGATTCTTTAAACATTGAGGCTATTCAGATAAGGAAGAAAAATAAGAGACTATTAAAA
GATATTGCTACTTTGGATAATAAAGCTGAAGCTCAAAAGGTGTGCATCAGGAAATTGAAGCATGAGTTGGAAAGAGTGAACAAGGTTGCTGTAGATTTTCAAAGT
GCATTGGATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAAACAATTTGCACCAGTCATCTATGGGTTGGAAGATTTGGGATTTCTCTTACGAGGCTGATAAGACAGGTCAAGGTGCAAGAAGCAGTAGAAGCATGG
AAGGTTGTAAGAAGAATAAAGAGTCTACGACATTGCGAGGGTACTATAAATCAGTACAACATTTGGAGAGCTACTAGAAGTGGGGTTGAACTAGTTATTGCCCCA
CAATCTTTGGATCCCAACAATGTTTTTAGAATAAATCATGATGATCAAGAAAAGGACTTGAAACAGTTGAGAGAGAGGAACCAGGTCCTAGCAACGGAGAATGAG
GGGCTGAGGGAAGAAGTCAAACGATGGTTAGAGTTGGAGAAGGACATGGATTCTTTAAACATTGAGGCTATTCAGATAAGGAAGAAAAATAAGAGACTATTAAAA
GATATTGCTACTTTGGATAATAAAGCTGAAGCTCAAAAGGTGTGCATCAGGAAATTGAAGCATGAGTTGGAAAGAGTGAACAAGGTTGCTGTAGATTTTCAAAGT
GCATTGGATCAGTAA
Protein sequenceShow/hide protein sequence
MVKTICTSHLWVGRFGISLTRLIRQVKVQEAVEAWKVVRRIKSLRHCEGTINQYNIWRATRSGVELVIAPQSLDPNNVFRINHDDQEKDLKQLRERNQVLATENE
GLREEVKRWLELEKDMDSLNIEAIQIRKKNKRLLKDIATLDNKAEAQKVCIRKLKHELERVNKVAVDFQSALDQ